RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNF764Q96H86 408 aaPredicted RBP2.21□□□□□ -2.06
COPB1-212ENST00000534771 POP1Q99575 1024 aaKnown RBP2.21□□□□□ -2.06
COPB1-212ENST00000534771 RUSC1Q9BVN2 902 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 PBX4Q9BYU1 374 aa2.21□□□□□ -2.06
COPB1-212ENST00000534771 PCSK5Q92824 1860 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 A6NJR5 290 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L15C9J2P7 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L10C9JJH3 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L13C9JLJ4 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L12C9JPN9 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L11C9JVI0 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L21D6R901 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L18D6R9N7 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L22D6RA61 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L17D6RBQ6 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L19D6RCP7 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L20D6RJB6 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 H3BRJ5 948 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 KIF4AO95239 1232 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 TACR2P21452 398 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 NLRP12P59046 1061 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 PRKCQQ04759 706 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 USP17L24Q0WX57 530 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 FLIIQ13045 1269 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 AOC3Q16853 763 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 EXOSC6Q5RKV6 272 aaKnown RBP2.2□□□□□ -2.06
COPB1-212ENST00000534771 CDPF1Q6NVV7 123 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 ADAMTSL4Q6UY14 1074 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 Q8N1X5 172 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 CEP120Q8N960 986 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 FAM200AQ8TCP9 573 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 SLC7A3Q8WY07 619 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 ARXQ96QS3 562 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 SLC26A8Q96RN1 970 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 PPP1R12CQ9BZL4 782 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 ZMYND15Q9H091 742 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 CYP4F12Q9HCS2 524 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 DLL4Q9NR61 685 aa2.2□□□□□ -2.06
COPB1-212ENST00000534771 ABI2Q9NYB9 513 aaPredicted RBP2.2□□□□□ -2.06
COPB1-212ENST00000534771 CNOT6Q9ULM6 557 aaKnown RBP2.2□□□□□ -2.06
COPB1-212ENST00000534771 K7ESM1 405 aa2.19□□□□□ -2.06
COPB1-212ENST00000534771 LMOD1P29536 600 aaPredicted RBP2.19□□□□□ -2.06
COPB1-212ENST00000534771 MAGEA10P43363 369 aaPredicted RBP2.19□□□□□ -2.06
COPB1-212ENST00000534771 C19orf57Q0VDD7 668 aa2.19□□□□□ -2.06
COPB1-212ENST00000534771 TRIP4Q15650 581 aaPredicted RBP2.19□□□□□ -2.06
COPB1-212ENST00000534771 SMN1Q16637 294 aaKnown RBP2.19□□□□□ -2.06
COPB1-212ENST00000534771 ZNF385BQ569K4 471 aa2.19□□□□□ -2.06
COPB1-212ENST00000534771 ANGEL2Q5VTE6 544 aaKnown RBP2.19□□□□□ -2.06
COPB1-212ENST00000534771 C16orf46Q6P387 395 aa2.19□□□□□ -2.06
COPB1-212ENST00000534771 SYT8Q8NBV8 401 aa2.19□□□□□ -2.06
COPB1-212ENST00000534771 SMG8Q8ND04 991 aaKnown RBP2.19□□□□□ -2.06
COPB1-212ENST00000534771 NETO1Q8TDF5 533 aa2.19□□□□□ -2.06
COPB1-212ENST00000534771 GLMNQ92990 594 aa2.19□□□□□ -2.06
COPB1-212ENST00000534771 SAP130Q9H0E3 1048 aa2.19□□□□□ -2.06
COPB1-212ENST00000534771 NFKBIEO00221 500 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 SOX1O00570 391 aaPredicted RBP2.18□□□□□ -2.06
COPB1-212ENST00000534771 CYP2E1P05181 493 aaPredicted RBP2.18□□□□□ -2.06
COPB1-212ENST00000534771 DRD2P14416 443 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 RFX1P22670 979 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 ADAM17P78536 824 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 FKBP5Q13451 457 aaPredicted RBP2.18□□□□□ -2.06
COPB1-212ENST00000534771 GLCCI1Q86VQ1 547 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 TMEM151BQ8IW70 566 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 GPR152Q8TDT2 470 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 PMEPA1Q969W9 287 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 CALR3Q96L12 384 aaKnown RBP2.18□□□□□ -2.06
COPB1-212ENST00000534771 PRIMPOLQ96LW4 560 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 YIPF2Q9BWQ6 316 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 TMPRSS13Q9BYE2 586 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 SUGCTQ9HAC7 445 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 SALL4Q9UJQ4 1053 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 KCTD3Q9Y597 815 aa2.18□□□□□ -2.06
COPB1-212ENST00000534771 PDE2AO00408 941 aaPredicted RBP2.17□□□□□ -2.06
COPB1-212ENST00000534771 TIAF1O95411 115 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 CES1P23141 567 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 ZAP70P43403 619 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 SOX4Q06945 474 aaPredicted RBP2.17□□□□□ -2.06
COPB1-212ENST00000534771 IKBKEQ14164 716 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 MAP7Q14244 749 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 NAA30Q147X3 362 aaPredicted RBP2.17□□□□□ -2.06
COPB1-212ENST00000534771 RTP5Q14D33 572 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 FAM26DQ5JW98 314 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 PDE12Q6L8Q7 609 aaKnown RBP2.17□□□□□ -2.06
COPB1-212ENST00000534771 CYFIP1Q7L576 1253 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 FNBP4Q8N3X1 1017 aaPredicted RBP2.17□□□□□ -2.06
COPB1-212ENST00000534771 FAM181AQ8N9Y4 354 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 BSNDQ8WZ55 320 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 EZH1Q92800 747 aaPredicted RBP2.17□□□□□ -2.06
COPB1-212ENST00000534771 PCED1AQ9H1Q7 454 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 ELP3Q9H9T3 547 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 DZANK1Q9NVP4 752 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 TMEM63CQ9P1W3 806 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 STIM2Q9P246 746 aa2.17□□□□□ -2.06
COPB1-212ENST00000534771 LOC100289279A0A1B0GTE1 492 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 ZC3H12DA2A288 527 aaKnown RBP2.16□□□□□ -2.06
COPB1-212ENST00000534771 ZBTB39O15060 712 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 PRICKLE3O43900 615 aaPredicted RBP2.16□□□□□ -2.06
COPB1-212ENST00000534771 EIF4EBP3O60516 100 aaPredicted RBP2.16□□□□□ -2.06
COPB1-212ENST00000534771 PRMT3O60678 531 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms