RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 APOBEC3HQ6NTF7 200 aaKnown RBP18.24■□□□□ 0.51
CDC27-209ENST00000532893 NKX2-3Q8TAU0 364 aa18.24■□□□□ 0.51
CDC27-209ENST00000532893 HOOK2Q96ED9 719 aa18.24■□□□□ 0.51
CDC27-209ENST00000532893 ZDHHC15Q96MV8 337 aa18.24■□□□□ 0.51
CDC27-209ENST00000532893 BIN2Q9UBW5 565 aaPredicted RBP18.24■□□□□ 0.51
CDC27-209ENST00000532893 PDHXO00330 501 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 CCL5P13501 91 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 INPP5BP32019 993 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 CAVIN4Q5BKX8 364 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 FKBP1CQ5VVH2 108 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 MRIQ9BWK5 157 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 ZNF341Q9BYN7 854 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 RNF208Q9H0X6 261 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
CDC27-209ENST00000532893 MROH5Q6ZUA9 1318 aa18.23■□□□□ 0.51
CDC27-209ENST00000532893 ALDH1L1O75891 902 aa18.22■□□□□ 0.51
CDC27-209ENST00000532893 GJB1P08034 283 aa18.22■□□□□ 0.51
CDC27-209ENST00000532893 GJA8P48165 433 aa18.22■□□□□ 0.51
CDC27-209ENST00000532893 BCAMP50895 628 aa18.22■□□□□ 0.51
CDC27-209ENST00000532893 LRRC24Q50LG9 513 aa18.22■□□□□ 0.51
CDC27-209ENST00000532893 ANKRD23Q86SG2 305 aa18.22■□□□□ 0.51
CDC27-209ENST00000532893 KAZALD1Q96I82 304 aa18.22■□□□□ 0.51
CDC27-209ENST00000532893 HTATIP2Q9BUP3 242 aa18.22■□□□□ 0.51
CDC27-209ENST00000532893 ARAP2Q8WZ64 1704 aa18.21■□□□□ 0.51
CDC27-209ENST00000532893 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
CDC27-209ENST00000532893 UBE2Q1Q7Z7E8 422 aa18.21■□□□□ 0.51
CDC27-209ENST00000532893 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
CDC27-209ENST00000532893 MYPNQ86TC9 1320 aa18.21■□□□□ 0.51
CDC27-209ENST00000532893 CACNA1FO60840 1977 aa18.21■□□□□ 0.5
CDC27-209ENST00000532893 A0A0C4DFX4 3053 aa18.2■□□□□ 0.5
CDC27-209ENST00000532893 HHIPL2Q6UWX4 724 aa18.2■□□□□ 0.5
CDC27-209ENST00000532893 NR2E3Q9Y5X4 410 aa18.2■□□□□ 0.5
CDC27-209ENST00000532893 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
CDC27-209ENST00000532893 UBXN2AP68543 259 aa18.19■□□□□ 0.5
CDC27-209ENST00000532893 MOGSQ13724 837 aa18.19■□□□□ 0.5
CDC27-209ENST00000532893 WDR63Q8IWG1 891 aa18.19■□□□□ 0.5
CDC27-209ENST00000532893 SLC17A8Q8NDX2 589 aa18.19■□□□□ 0.5
CDC27-209ENST00000532893 PRO3102Q9H379 93 aa18.19■□□□□ 0.5
CDC27-209ENST00000532893 KCNH4Q9UQ05 1017 aa18.19■□□□□ 0.5
CDC27-209ENST00000532893 ADGRA2Q96PE1 1338 aa18.19■□□□□ 0.5
CDC27-209ENST00000532893 PDE8BO95263 885 aa18.18■□□□□ 0.5
CDC27-209ENST00000532893 PRKCZQ05513 592 aa18.18■□□□□ 0.5
CDC27-209ENST00000532893 TCP10Q12799 353 aa18.18■□□□□ 0.5
CDC27-209ENST00000532893 FAM151AQ8WW52 585 aa18.18■□□□□ 0.5
CDC27-209ENST00000532893 BICC1Q9H694 974 aaKnown RBP18.18■□□□□ 0.5
CDC27-209ENST00000532893 ZNF112Q9UJU3 913 aa18.18■□□□□ 0.5
CDC27-209ENST00000532893 SUGT1Q9Y2Z0 365 aa18.18■□□□□ 0.5
CDC27-209ENST00000532893 MAST3O60307 1309 aa18.18■□□□□ 0.5
CDC27-209ENST00000532893 DLL1O00548 723 aa18.17■□□□□ 0.5
CDC27-209ENST00000532893 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
CDC27-209ENST00000532893 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
CDC27-209ENST00000532893 U2AF1L4Q8WU68 220 aaKnown RBP18.17■□□□□ 0.5
CDC27-209ENST00000532893 UNC93B1Q9H1C4 597 aa18.17■□□□□ 0.5
CDC27-209ENST00000532893 GABRQQ9UN88 632 aa18.17■□□□□ 0.5
CDC27-209ENST00000532893 FARP2O94887 1054 aaPredicted RBP18.16■□□□□ 0.5
CDC27-209ENST00000532893 CYP2C8P10632 490 aa18.16■□□□□ 0.5
CDC27-209ENST00000532893 BCRP11274 1271 aa18.16■□□□□ 0.5
CDC27-209ENST00000532893 FCGRTP55899 365 aa18.16■□□□□ 0.5
CDC27-209ENST00000532893 GPAT2Q6NUI2 795 aa18.16■□□□□ 0.5
CDC27-209ENST00000532893 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
CDC27-209ENST00000532893 RPAP1Q9BWH6 1393 aaPredicted RBP18.16■□□□□ 0.5
CDC27-209ENST00000532893 SGPL1O95470 568 aa18.15■□□□□ 0.5
CDC27-209ENST00000532893 CDC42EP5Q6NZY7 148 aa18.15■□□□□ 0.5
CDC27-209ENST00000532893 KLHDC4Q8TBB5 520 aa18.15■□□□□ 0.5
CDC27-209ENST00000532893 PARK7Q99497 189 aaKnown RBP18.15■□□□□ 0.5
CDC27-209ENST00000532893 COL6A3P12111 3177 aa18.14■□□□□ 0.49
CDC27-209ENST00000532893 IFIT1P09914 478 aaKnown RBP18.14■□□□□ 0.49
CDC27-209ENST00000532893 NFIAQ12857 509 aa18.14■□□□□ 0.49
CDC27-209ENST00000532893 RABL6Q3YEC7 729 aaPredicted RBP18.14■□□□□ 0.49
CDC27-209ENST00000532893 ANKRD44Q8N8A2 993 aa18.14■□□□□ 0.49
CDC27-209ENST00000532893 SLAIN1Q8ND83 568 aa18.14■□□□□ 0.49
CDC27-209ENST00000532893 UTYO14607 1347 aa18.14■□□□□ 0.49
CDC27-209ENST00000532893 CXCL11O14625 94 aa18.13■□□□□ 0.49
CDC27-209ENST00000532893 ADCY3O60266 1144 aa18.13■□□□□ 0.49
CDC27-209ENST00000532893 EVI5O60447 810 aa18.13■□□□□ 0.49
CDC27-209ENST00000532893 TFRCP02786 760 aaKnown RBP18.13■□□□□ 0.49
CDC27-209ENST00000532893 FGFR2P21802 821 aa18.13■□□□□ 0.49
CDC27-209ENST00000532893 DIXDC1Q155Q3 683 aa18.13■□□□□ 0.49
CDC27-209ENST00000532893 NOL9Q5SY16 702 aaKnown RBP18.13■□□□□ 0.49
CDC27-209ENST00000532893 WDR66Q8TBY9 1149 aa18.13■□□□□ 0.49
CDC27-209ENST00000532893 DAGLAQ9Y4D2 1042 aa18.13■□□□□ 0.49
CDC27-209ENST00000532893 SOX1O00570 391 aaPredicted RBP18.12■□□□□ 0.49
CDC27-209ENST00000532893 ELNP15502 786 aa18.12■□□□□ 0.49
CDC27-209ENST00000532893 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
CDC27-209ENST00000532893 FLT3LGP49771 235 aa18.12■□□□□ 0.49
CDC27-209ENST00000532893 PUM3Q15397 648 aaKnown RBP18.12■□□□□ 0.49
CDC27-209ENST00000532893 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
CDC27-209ENST00000532893 USP40Q9NVE5 1235 aa18.12■□□□□ 0.49
CDC27-209ENST00000532893 FAM198AQ9UFP1 575 aa18.12■□□□□ 0.49
CDC27-209ENST00000532893 STAP2Q9UGK3 403 aa18.12■□□□□ 0.49
CDC27-209ENST00000532893 ZHX2Q9Y6X8 837 aa18.12■□□□□ 0.49
CDC27-209ENST00000532893 LRCH3Q96II8 777 aa18.11■□□□□ 0.49
CDC27-209ENST00000532893 AK9Q5TCS8 1911 aa18.1■□□□□ 0.49
CDC27-209ENST00000532893 KIF16BQ96L93 1317 aa18.1■□□□□ 0.49
CDC27-209ENST00000532893 INHAP05111 366 aa18.1■□□□□ 0.49
CDC27-209ENST00000532893 GADL1Q6ZQY3 521 aa18.1■□□□□ 0.49
CDC27-209ENST00000532893 FASTKD5Q7L8L6 764 aaKnown RBP18.1■□□□□ 0.49
CDC27-209ENST00000532893 DEFB118Q96PH6 123 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms