RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 A0A0U1RQG5 324 aaPredicted RBP18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 CHRNA5P30532 468 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 AOX1Q06278 1338 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 CIAO1O76071 339 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 LINC00116Q8NCU8 138 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 ARID3AQ99856 593 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 C8orf34Q49A92 452 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 IVNS1ABPQ9Y6Y0 642 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 H7C1W4 665 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 SEC24BO95487 1268 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 IRX3P78415 501 aaPredicted RBP18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 ZBTB21Q9ULJ3 1066 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 PNPLA6Q8IY17 1366 aa18.07■□□□□ 0.48
PPFIA1-222ENST00000532504 PATL2C9JE40 543 aaKnown RBP18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 PTPN12Q05209 780 aaKnown RBP18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 CARMIL3Q8ND23 1372 aa18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 PTPDC1A2A3K4 754 aa18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 MAP3K11Q16584 847 aa18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 CELF1Q92879 486 aaKnown RBP18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 SEPT11Q9NVA2 429 aaKnown RBP18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 B4DLN1 442 aa18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 DTNBO60941 627 aa18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 MRPL12P52815 198 aaKnown RBP18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 RNF123Q5XPI4 1314 aa18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 PPARAQ07869 468 aa18.06■□□□□ 0.48
PPFIA1-222ENST00000532504 PPP1R12BO60237 982 aaPredicted RBP18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 CIAPIN1Q6FI81 312 aa18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 HAUS7Q99871 368 aa18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 BSDC1Q9NW68 430 aaPredicted RBP18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 A0A0D9SFI3 127 aa18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 RBM27Q9P2N5 1060 aaKnown RBP18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 IBTKQ9P2D0 1353 aaPredicted RBP18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 A0A0G2JLW4 131 aa18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 CC2D2BQ6DHV5 1058 aa18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 FNBP4Q8N3X1 1017 aaPredicted RBP18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 BIN1O00499 593 aa18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 MARCKSP29966 332 aaPredicted RBP18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 NCOA5Q9HCD5 579 aaKnown RBP18.05■□□□□ 0.48
PPFIA1-222ENST00000532504 NSMFQ6X4W1 530 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 MYO3AQ8NEV4 1616 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 CALML3P27482 149 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 ITPK1Q13572 414 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 USH1GQ495M9 461 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 DCAF15Q66K64 600 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 CCDC174Q6PII3 467 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 PAF1Q8N7H5 531 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 PAGR1Q9BTK6 254 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 ANTXR1Q9H6X2 564 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 V9GY48 417 aaPredicted RBP18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 GNA11P29992 359 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 SMARCE1Q969G3 411 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 ZNF277Q9NRM2 450 aaPredicted RBP18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 ARPP21Q9UBL0 812 aaPredicted RBP18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 ANGEL1Q9UNK9 670 aaKnown RBP18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 DIXDC1Q155Q3 683 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 ERMNQ8TAM6 284 aa18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 ZNHIT6Q9NWK9 470 aaKnown RBP18.04■□□□□ 0.48
PPFIA1-222ENST00000532504 PPFIBP1Q86W92 1011 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 IFNL3Q8IZI9 196 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 TNPO1Q92973 898 aaKnown RBP18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 TMEM87BQ96K49 555 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 ISM2Q6H9L7 571 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 KIFC2Q96AC6 838 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 SYCE3A1L190 88 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 RPS6KB1P23443 525 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 RBM28Q9NW13 759 aaKnown RBP18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 hCG_1642624A0A1W2PR95 340 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 IQSEC2Q5JU85 1478 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 DCCP43146 1447 aa18.03■□□□□ 0.48
PPFIA1-222ENST00000532504 DYNLL1P63167 89 aaKnown RBP18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 CSRNP1Q96S65 589 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 DEF6Q9H4E7 631 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 RNF181Q9P0P0 153 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 USP17L3A6NCW0 530 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 USP17L4A6NCW7 530 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 MCM7P33993 719 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 USP17L1Q7RTZ2 530 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 AOC3Q16853 763 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 AKNAD1Q5T1N1 836 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 SNX14Q9Y5W7 946 aa18.02■□□□□ 0.48
PPFIA1-222ENST00000532504 KRT2P35908 639 aa18.02■□□□□ 0.47
PPFIA1-222ENST00000532504 GADL1Q6ZQY3 521 aa18.02■□□□□ 0.47
PPFIA1-222ENST00000532504 BACH1O14867 736 aa18.02■□□□□ 0.47
PPFIA1-222ENST00000532504 ZSCAN16Q9H4T2 348 aaPredicted RBP18.02■□□□□ 0.47
PPFIA1-222ENST00000532504 ZSCAN22P10073 491 aaPredicted RBP18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 EIF5P55010 431 aaKnown RBP18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 TSG101Q99816 390 aa18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 GOPCQ9HD26 462 aa18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 ZBED4O75132 1171 aa18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 SYCP3Q8IZU3 236 aa18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 TRIM75PA6NK02 468 aa18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 NOM1Q5C9Z4 860 aaKnown RBP18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 TMEM87AQ8NBN3 555 aa18.01■□□□□ 0.47
PPFIA1-222ENST00000532504 MINPP1Q9UNW1 487 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms