RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CHGBP05060 677 aa20.44■□□□□ 0.86
SF3B2-211ENST00000531041 PPP4CP60510 307 aa20.44■□□□□ 0.86
SF3B2-211ENST00000531041 MYO1BO43795 1136 aa20.43■□□□□ 0.86
SF3B2-211ENST00000531041 BAG3O95817 575 aa20.43■□□□□ 0.86
SF3B2-211ENST00000531041 BTDP43251 543 aa20.43■□□□□ 0.86
SF3B2-211ENST00000531041 SLFNL1Q499Z3 407 aa20.43■□□□□ 0.86
SF3B2-211ENST00000531041 CERS3Q8IU89 383 aa20.43■□□□□ 0.86
SF3B2-211ENST00000531041 ZC3H15Q8WU90 426 aaKnown RBP20.43■□□□□ 0.86
SF3B2-211ENST00000531041 APPBP2Q92624 585 aa20.43■□□□□ 0.86
SF3B2-211ENST00000531041 NOL10Q9BSC4 688 aaKnown RBP20.43■□□□□ 0.86
SF3B2-211ENST00000531041 HIP1O00291 1037 aa20.42■□□□□ 0.86
SF3B2-211ENST00000531041 ZMYM1Q5SVZ6 1142 aa20.42■□□□□ 0.86
SF3B2-211ENST00000531041 ZNF784Q8NCA9 323 aaPredicted RBP20.42■□□□□ 0.86
SF3B2-211ENST00000531041 TDRD3Q9H7E2 651 aaKnown RBP20.42■□□□□ 0.86
SF3B2-211ENST00000531041 PGAP2Q9UHJ9 254 aa20.42■□□□□ 0.86
SF3B2-211ENST00000531041 MYH1P12882 1939 aa20.42■□□□□ 0.86
SF3B2-211ENST00000531041 PLCG2P16885 1265 aa20.41■□□□□ 0.86
SF3B2-211ENST00000531041 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
SF3B2-211ENST00000531041 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
SF3B2-211ENST00000531041 AATFQ9NY61 560 aaKnown RBP eCLIP20.41■□□□□ 0.86
SF3B2-211ENST00000531041 RHBDL3P58872 404 aa20.4■□□□□ 0.86
SF3B2-211ENST00000531041 CDC42EP5Q6NZY7 148 aa20.4■□□□□ 0.86
SF3B2-211ENST00000531041 MIGA1Q8NAN2 632 aa20.4■□□□□ 0.86
SF3B2-211ENST00000531041 OSBP2Q969R2 916 aa20.4■□□□□ 0.86
SF3B2-211ENST00000531041 RIOK1Q9BRS2 568 aaKnown RBP20.4■□□□□ 0.86
SF3B2-211ENST00000531041 PUS7LQ9H0K6 701 aaKnown RBP20.4■□□□□ 0.86
SF3B2-211ENST00000531041 USP40Q9NVE5 1235 aa20.4■□□□□ 0.86
SF3B2-211ENST00000531041 ZNF70Q9UC06 446 aaPredicted RBP20.4■□□□□ 0.86
SF3B2-211ENST00000531041 PITPNM2Q9BZ72 1349 aa20.4■□□□□ 0.86
SF3B2-211ENST00000531041 BAZ2AQ9UIF9 1905 aaKnown RBP20.39■□□□□ 0.85
SF3B2-211ENST00000531041 MAGEB6P1A0A0J9YX57 407 aa20.39■□□□□ 0.85
SF3B2-211ENST00000531041 KIF3CO14782 793 aa20.39■□□□□ 0.85
SF3B2-211ENST00000531041 DIAPH3Q9NSV4 1193 aa20.39■□□□□ 0.85
SF3B2-211ENST00000531041 NAV1Q8NEY1 1877 aa20.39■□□□□ 0.85
SF3B2-211ENST00000531041 ASTN2O75129 1339 aaPredicted RBP20.39■□□□□ 0.85
SF3B2-211ENST00000531041 DYNLL1P63167 89 aaKnown RBP20.38■□□□□ 0.85
SF3B2-211ENST00000531041 FKBP1CQ5VVH2 108 aa20.38■□□□□ 0.85
SF3B2-211ENST00000531041 LDHDQ86WU2 507 aa20.38■□□□□ 0.85
SF3B2-211ENST00000531041 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
SF3B2-211ENST00000531041 GGA3Q9NZ52 723 aa20.38■□□□□ 0.85
SF3B2-211ENST00000531041 CLRN2A0PK11 232 aa20.37■□□□□ 0.85
SF3B2-211ENST00000531041 POTEIP0CG38 1075 aa20.37■□□□□ 0.85
SF3B2-211ENST00000531041 POTEJP0CG39 1038 aa20.37■□□□□ 0.85
SF3B2-211ENST00000531041 CHMLP26374 656 aa20.37■□□□□ 0.85
SF3B2-211ENST00000531041 NMIQ13287 307 aaPredicted RBP20.37■□□□□ 0.85
SF3B2-211ENST00000531041 ANGEL2Q5VTE6 544 aaKnown RBP20.37■□□□□ 0.85
SF3B2-211ENST00000531041 SH3RF3Q8TEJ3 882 aaPredicted RBP20.37■□□□□ 0.85
SF3B2-211ENST00000531041 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
SF3B2-211ENST00000531041 FAM227BQ96M60 508 aa20.37■□□□□ 0.85
SF3B2-211ENST00000531041 SEC62Q99442 399 aaKnown RBP20.37■□□□□ 0.85
SF3B2-211ENST00000531041 TMOD2Q9NZR1 351 aa20.37■□□□□ 0.85
SF3B2-211ENST00000531041 A0A0D9SFI3 127 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 M0R2C6 588 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 MBD4O95243 580 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 APOBEC3FQ8IUX4 373 aaKnown RBP20.36■□□□□ 0.85
SF3B2-211ENST00000531041 LCORLQ8N3X6 602 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 DCPSQ96C86 337 aaKnown RBP20.36■□□□□ 0.85
SF3B2-211ENST00000531041 IDI2Q9BXS1 227 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 CLEC11AQ9Y240 323 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 DDX60LQ5H9U9 1706 aaKnown RBP20.36■□□□□ 0.85
SF3B2-211ENST00000531041 NPM3O75607 178 aaKnown RBP20.36■□□□□ 0.85
SF3B2-211ENST00000531041 WDHD1O75717 1129 aaPredicted RBP20.36■□□□□ 0.85
SF3B2-211ENST00000531041 MCMDC2Q4G0Z9 681 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
SF3B2-211ENST00000531041 TEX11Q8IYF3 940 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 STRBPQ96SI9 672 aaKnown RBP20.36■□□□□ 0.85
SF3B2-211ENST00000531041 ARMT1Q9H993 441 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 VEZTQ9HBM0 779 aa20.36■□□□□ 0.85
SF3B2-211ENST00000531041 TRPM7Q96QT4 1865 aa20.35■□□□□ 0.85
SF3B2-211ENST00000531041 GPAA1O43292 621 aa20.35■□□□□ 0.85
SF3B2-211ENST00000531041 CACNB3P54284 484 aa20.35■□□□□ 0.85
SF3B2-211ENST00000531041 TNFAIP1Q13829 316 aa20.35■□□□□ 0.85
SF3B2-211ENST00000531041 RUFY2Q8WXA3 655 aa20.35■□□□□ 0.85
SF3B2-211ENST00000531041 CRNKL1Q9BZJ0 848 aaKnown RBP20.35■□□□□ 0.85
SF3B2-211ENST00000531041 CDC45O75419 566 aa20.34■□□□□ 0.85
SF3B2-211ENST00000531041 FAM83AQ86UY5 434 aa20.34■□□□□ 0.85
SF3B2-211ENST00000531041 TCP10L2B9ZVM9 353 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 GNAT2P19087 354 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 TNNI2P48788 182 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 NFIAQ12857 509 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 SULF1Q8IWU6 871 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 TGFBRAP1Q8WUH2 860 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 FAM198AQ9UFP1 575 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 RAD50Q92878 1312 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 CNTNAP1P78357 1384 aa20.33■□□□□ 0.84
SF3B2-211ENST00000531041 ENTPD3O75355 529 aa20.32■□□□□ 0.84
SF3B2-211ENST00000531041 MFAP1P55081 439 aaKnown RBP20.32■□□□□ 0.84
SF3B2-211ENST00000531041 CHADLQ6NUI6 762 aa20.32■□□□□ 0.84
SF3B2-211ENST00000531041 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
SF3B2-211ENST00000531041 KRT26Q7Z3Y9 468 aa20.32■□□□□ 0.84
SF3B2-211ENST00000531041 DDX4Q9NQI0 724 aaKnown RBP20.32■□□□□ 0.84
SF3B2-211ENST00000531041 LAMB1P07942 1786 aa20.32■□□□□ 0.84
SF3B2-211ENST00000531041 TOMM70O94826 608 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 USP5P45974 858 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 RASA3Q14644 834 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 MAP1SQ66K74 1059 aaPredicted RBP20.31■□□□□ 0.84
SF3B2-211ENST00000531041 CASC1Q6TDU7 716 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 CCDC129Q6ZRS4 1044 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 ZNF589Q86UQ0 364 aaPredicted RBP20.31■□□□□ 0.84
SF3B2-211ENST00000531041 FAM151AQ8WW52 585 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms