RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 NBPF12Q5TAG4 269 aaPredicted RBP21.27■■□□□ 1
USP35-202ENST00000528910 ARMC9Q7Z3E5 817 aa21.27■■□□□ 1
USP35-202ENST00000528910 ZNF384Q8TF68 577 aa21.27■■□□□ 1
USP35-202ENST00000528910 IL1RAPL2Q9NP60 686 aa21.27■■□□□ 1
USP35-202ENST00000528910 MROH7-TTC4A0A0A0MT08 1334 aa21.27■□□□□ 0.99
USP35-202ENST00000528910 IGSF3O75054 1194 aa21.26■□□□□ 0.99
USP35-202ENST00000528910 ZNF157P51786 506 aaPredicted RBP21.26■□□□□ 0.99
USP35-202ENST00000528910 MAP2K1Q02750 393 aaPredicted RBP21.26■□□□□ 0.99
USP35-202ENST00000528910 TTLL12Q14166 644 aaPredicted RBP21.26■□□□□ 0.99
USP35-202ENST00000528910 LDLRAD1Q5T700 205 aa21.26■□□□□ 0.99
USP35-202ENST00000528910 CDC42EP5Q6NZY7 148 aa21.26■□□□□ 0.99
USP35-202ENST00000528910 CDAN1Q8IWY9 1227 aa21.26■□□□□ 0.99
USP35-202ENST00000528910 SLF2Q8IX21 1173 aa21.26■□□□□ 0.99
USP35-202ENST00000528910 AK9Q5TCS8 1911 aa21.25■□□□□ 0.99
USP35-202ENST00000528910 UBE2Q2LH0YL09 131 aa21.25■□□□□ 0.99
USP35-202ENST00000528910 MECOMQ03112 1051 aa21.25■□□□□ 0.99
USP35-202ENST00000528910 TBC1D9Q6ZT07 1266 aa21.25■□□□□ 0.99
USP35-202ENST00000528910 CLASRPQ8N2M8 674 aaKnown RBP21.25■□□□□ 0.99
USP35-202ENST00000528910 NSUN4Q96CB9 384 aaKnown RBP21.25■□□□□ 0.99
USP35-202ENST00000528910 TMEM39BQ9GZU3 492 aa21.25■□□□□ 0.99
USP35-202ENST00000528910 PPP1R12BO60237 982 aaPredicted RBP21.24■□□□□ 0.99
USP35-202ENST00000528910 ANGEL1Q9UNK9 670 aaKnown RBP21.24■□□□□ 0.99
USP35-202ENST00000528910 MYH7P12883 1935 aa21.23■□□□□ 0.99
USP35-202ENST00000528910 UNCXA6NJT0 531 aa21.23■□□□□ 0.99
USP35-202ENST00000528910 CYP2E1P05181 493 aaPredicted RBP21.23■□□□□ 0.99
USP35-202ENST00000528910 COL13A1Q5TAT6 717 aaPredicted RBP21.23■□□□□ 0.99
USP35-202ENST00000528910 CRBNQ96SW2 442 aa21.23■□□□□ 0.99
USP35-202ENST00000528910 ZIC5Q96T25 663 aa21.23■□□□□ 0.99
USP35-202ENST00000528910 SNRKQ9NRH2 765 aa21.23■□□□□ 0.99
USP35-202ENST00000528910 GPR75-ASB3A0A0A6YYF3 556 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 APBB1O00213 710 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 FOXN1O15353 648 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 ZAP70P43403 619 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 GSTO1P78417 241 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 NFIAQ12857 509 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 PRKG1Q13976 671 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 IDI2Q9BXS1 227 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 FZD1Q9UP38 647 aa21.22■□□□□ 0.99
USP35-202ENST00000528910 BTDP43251 543 aa21.21■□□□□ 0.99
USP35-202ENST00000528910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.21■□□□□ 0.99
USP35-202ENST00000528910 FAM151AQ8WW52 585 aa21.21■□□□□ 0.99
USP35-202ENST00000528910 DCTPP1Q9H773 170 aa21.21■□□□□ 0.99
USP35-202ENST00000528910 USP40Q9NVE5 1235 aa21.21■□□□□ 0.99
USP35-202ENST00000528910 RAI14Q9P0K7 980 aa21.21■□□□□ 0.99
USP35-202ENST00000528910 LRP2BPQ9P2M1 347 aa21.21■□□□□ 0.99
USP35-202ENST00000528910 FAM198AQ9UFP1 575 aa21.21■□□□□ 0.99
USP35-202ENST00000528910 PCDHB15Q9Y5E8 787 aa21.21■□□□□ 0.99
USP35-202ENST00000528910 COL2A1P02458 1487 aaPredicted RBP21.2■□□□□ 0.98
USP35-202ENST00000528910 USP2O75604 605 aaPredicted RBP21.2■□□□□ 0.98
USP35-202ENST00000528910 LDHCP07864 332 aa21.2■□□□□ 0.98
USP35-202ENST00000528910 IREB2P48200 963 aaKnown RBP21.2■□□□□ 0.98
USP35-202ENST00000528910 RHBDL3P58872 404 aa21.2■□□□□ 0.98
USP35-202ENST00000528910 LRRCC1Q9C099 1032 aa21.2■□□□□ 0.98
USP35-202ENST00000528910 PIH1D3Q9NQM4 214 aaKnown RBP21.2■□□□□ 0.98
USP35-202ENST00000528910 WDHD1O75717 1129 aaPredicted RBP21.19■□□□□ 0.98
USP35-202ENST00000528910 MAP4K4O95819 1239 aaPredicted RBP21.19■□□□□ 0.98
USP35-202ENST00000528910 IFIT2P09913 472 aaKnown RBP21.19■□□□□ 0.98
USP35-202ENST00000528910 KIF23Q02241 960 aaPredicted RBP21.19■□□□□ 0.98
USP35-202ENST00000528910 HOOK2Q96ED9 719 aa21.19■□□□□ 0.98
USP35-202ENST00000528910 ATRNL1Q5VV63 1379 aa21.19■□□□□ 0.98
USP35-202ENST00000528910 SIPA1L1O43166 1804 aa21.18■□□□□ 0.98
USP35-202ENST00000528910 ENTPD3O75355 529 aa21.18■□□□□ 0.98
USP35-202ENST00000528910 CTCFP49711 727 aaPredicted RBP21.18■□□□□ 0.98
USP35-202ENST00000528910 REM2Q8IYK8 340 aaPredicted RBP21.18■□□□□ 0.98
USP35-202ENST00000528910 ANKRD13AQ8IZ07 590 aa21.18■□□□□ 0.98
USP35-202ENST00000528910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.18■□□□□ 0.98
USP35-202ENST00000528910 CA12O43570 354 aa21.17■□□□□ 0.98
USP35-202ENST00000528910 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
USP35-202ENST00000528910 HSPA8P11142 646 aaKnown RBP21.17■□□□□ 0.98
USP35-202ENST00000528910 RGS3P49796 1198 aa21.17■□□□□ 0.98
USP35-202ENST00000528910 NAA16Q6N069 864 aaPredicted RBP21.17■□□□□ 0.98
USP35-202ENST00000528910 CLMNQ96JQ2 1002 aa21.17■□□□□ 0.98
USP35-202ENST00000528910 BEGAINQ9BUH8 593 aa21.17■□□□□ 0.98
USP35-202ENST00000528910 DDX60LQ5H9U9 1706 aaKnown RBP21.17■□□□□ 0.98
USP35-202ENST00000528910 DOCK1Q14185 1865 aa21.16■□□□□ 0.98
USP35-202ENST00000528910 TCP10Q12799 353 aa21.16■□□□□ 0.98
USP35-202ENST00000528910 AAMPQ13685 434 aa21.16■□□□□ 0.98
USP35-202ENST00000528910 SPRYD7Q5W111 196 aa21.16■□□□□ 0.98
USP35-202ENST00000528910 TMED8Q6PL24 325 aaPredicted RBP21.16■□□□□ 0.98
USP35-202ENST00000528910 ZBTB48P10074 688 aaPredicted RBP21.15■□□□□ 0.98
USP35-202ENST00000528910 DCAF15Q66K64 600 aa21.15■□□□□ 0.98
USP35-202ENST00000528910 ADGRA1Q86SQ6 560 aa21.15■□□□□ 0.98
USP35-202ENST00000528910 WNK4Q96J92 1243 aa21.15■□□□□ 0.98
USP35-202ENST00000528910 ANTXR1Q9H6X2 564 aa21.15■□□□□ 0.98
USP35-202ENST00000528910 DDX4Q9NQI0 724 aaKnown RBP21.15■□□□□ 0.98
USP35-202ENST00000528910 NDUFB9Q9Y6M9 179 aa21.15■□□□□ 0.98
USP35-202ENST00000528910 NAV1Q8NEY1 1877 aa21.14■□□□□ 0.97
USP35-202ENST00000528910 PPP4CP60510 307 aa21.14■□□□□ 0.97
USP35-202ENST00000528910 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.14■□□□□ 0.97
USP35-202ENST00000528910 ZFPM1Q8IX07 1006 aa21.14■□□□□ 0.97
USP35-202ENST00000528910 CSRNP1Q96S65 589 aa21.14■□□□□ 0.97
USP35-202ENST00000528910 PRDM10Q9NQV6 1147 aa21.14■□□□□ 0.97
USP35-202ENST00000528910 SAGE1Q9NXZ1 904 aa21.14■□□□□ 0.97
USP35-202ENST00000528910 MYH1P12882 1939 aa21.14■□□□□ 0.97
USP35-202ENST00000528910 ATAD5Q96QE3 1844 aa21.13■□□□□ 0.97
USP35-202ENST00000528910 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
USP35-202ENST00000528910 IDH1O75874 414 aaKnown RBP21.13■□□□□ 0.97
USP35-202ENST00000528910 ATP5JP18859 108 aa21.13■□□□□ 0.97
USP35-202ENST00000528910 VGLL4Q14135 290 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms