RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PI16Q6UXB8 463 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 VSIG10LQ86VR7 867 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 GLYCTKQ8IVS8 523 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 STK35Q8TDR2 534 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 EPS8L3Q8TE67 593 aaKnown RBP3.59□□□□□ -1.83
CD44-212ENST00000524922 TBC1D32Q96NH3 1257 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 DNAJC25Q9H1X3 360 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 EHD4Q9H223 541 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 DISC1Q9NRI5 854 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 ATG3Q9NT62 314 aa3.59□□□□□ -1.83
CD44-212ENST00000524922 BSDC1Q9NW68 430 aaPredicted RBP3.59□□□□□ -1.83
CD44-212ENST00000524922 CYP26A1O43174 497 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 NDUFB5O43674 189 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 RAB6AP20340 208 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 AP3B2Q13367 1082 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 PDE3BQ13370 1112 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 OGFOD3Q6PK18 319 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 DYMQ7RTS9 669 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 SPRED2Q7Z698 418 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 RETREG2Q8NC44 543 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 C3orf58Q8NDZ4 430 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 BCL7CQ8WUZ0 217 aaPredicted RBP3.58□□□□□ -1.84
CD44-212ENST00000524922 CSRNP1Q96S65 589 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 NIF3L1Q9GZT8 377 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 RNF114Q9Y508 228 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 CCDC180Q9P1Z9 1646 aa3.58□□□□□ -1.84
CD44-212ENST00000524922 PAPLNO95428 1278 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 NEFMP07197 916 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 LIG1P18858 919 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 NTF4P34130 210 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 TXKP42681 527 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 ASPAP45381 313 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 MAP7Q14244 749 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 FAM214BQ7L5A3 538 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 TMC7Q7Z402 723 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 FBXL18Q96ME1 805 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 FANCD2OSQ96PS1 177 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 CORO1BQ9BR76 489 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 KRT82Q9NSB4 513 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 AP4E1Q9UPM8 1137 aa3.57□□□□□ -1.84
CD44-212ENST00000524922 SOWAHDA6NJG2 315 aa3.56□□□□□ -1.84
CD44-212ENST00000524922 NEFLP07196 543 aa3.56□□□□□ -1.84
CD44-212ENST00000524922 GSTP1P09211 210 aaKnown RBP3.56□□□□□ -1.84
CD44-212ENST00000524922 ZNF157P51786 506 aaPredicted RBP3.56□□□□□ -1.84
CD44-212ENST00000524922 ZNF252P-AS1Q0IIN9 211 aa3.56□□□□□ -1.84
CD44-212ENST00000524922 HP1BP3Q5SSJ5 553 aaPredicted RBP3.56□□□□□ -1.84
CD44-212ENST00000524922 B4GALNT3Q6L9W6 998 aa3.56□□□□□ -1.84
CD44-212ENST00000524922 ZNF574Q6ZN55 896 aaPredicted RBP3.56□□□□□ -1.84
CD44-212ENST00000524922 GIMAP7Q8NHV1 300 aa3.56□□□□□ -1.84
CD44-212ENST00000524922 YIPF2Q9BWQ6 316 aa3.56□□□□□ -1.84
CD44-212ENST00000524922 GNEQ9Y223 722 aaKnown RBP3.56□□□□□ -1.84
CD44-212ENST00000524922 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.56□□□□□ -1.84
CD44-212ENST00000524922 CARMIL2Q6F5E8 1435 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 TREHO43280 583 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 CYP27A1Q02318 531 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 RING1Q06587 406 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 CDK5R2Q13319 367 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 ZC3H12AQ5D1E8 599 aaKnown RBP3.55□□□□□ -1.84
CD44-212ENST00000524922 OGFOD2Q6N063 350 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 MPRIPQ6WCQ1 1025 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 DMRTB1Q96MA1 342 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 ZFYVE1Q9HBF4 777 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 ADAMTS6Q9UKP5 1117 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 ANGEL1Q9UNK9 670 aaKnown RBP3.55□□□□□ -1.84
CD44-212ENST00000524922 DAGLAQ9Y4D2 1042 aa3.55□□□□□ -1.84
CD44-212ENST00000524922 ABCC9O60706 1549 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 LEFTY1O75610 366 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 ID3Q02535 119 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 PDE3AQ14432 1141 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 TTLL4Q14679 1199 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 ENOX2Q16206 610 aaKnown RBP3.54□□□□□ -1.84
CD44-212ENST00000524922 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 RASIP1Q5U651 963 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 DUSP27Q5VZP5 1158 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 UBE3DQ7Z6J8 389 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 PLD6Q8N2A8 252 aaKnown RBP3.54□□□□□ -1.84
CD44-212ENST00000524922 POU5F2Q8N7G0 328 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 FAM181AQ8N9Y4 354 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 HEXIM2Q96MH2 286 aaKnown RBP3.54□□□□□ -1.84
CD44-212ENST00000524922 BCO2Q9BYV7 579 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 ZC3H12CQ9C0D7 883 aaKnown RBP3.54□□□□□ -1.84
CD44-212ENST00000524922 LGR6Q9HBX8 967 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 LRRC4CQ9HCJ2 640 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 RAD18Q9NS91 495 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 TMEM39AQ9NV64 488 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 PLAGL2Q9UPG8 496 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 TRAK1Q9UPV9 953 aa3.54□□□□□ -1.84
CD44-212ENST00000524922 ENC1O14682 589 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 GADD45BO75293 160 aaPredicted RBP3.53□□□□□ -1.84
CD44-212ENST00000524922 PAGE1O75459 146 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 FAM87AP0C7U9 286 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 YBX3P16989 372 aaKnown RBP eCLIP3.53□□□□□ -1.84
CD44-212ENST00000524922 JUNBP17275 347 aaPredicted RBP3.53□□□□□ -1.84
CD44-212ENST00000524922 BMP6P22004 513 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 CD96P40200 585 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 OXCT1P55809 520 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 FCGRTP55899 365 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 JAG1P78504 1218 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 BNIP3Q12983 259 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 NXPE4Q6UWF7 544 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms