RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 FLT3LGP49771 235 aa22.36■■□□□ 1.17
PVT1-220ENST00000524165 CASP7P55210 303 aa22.36■■□□□ 1.17
PVT1-220ENST00000524165 MOGSQ13724 837 aa22.36■■□□□ 1.17
PVT1-220ENST00000524165 IFT57Q9NWB7 429 aa22.36■■□□□ 1.17
PVT1-220ENST00000524165 MAGEA10P43363 369 aaPredicted RBP22.35■■□□□ 1.17
PVT1-220ENST00000524165 HDLBPQ00341 1268 aaKnown RBP22.35■■□□□ 1.17
PVT1-220ENST00000524165 GCKRQ14397 625 aa22.35■■□□□ 1.17
PVT1-220ENST00000524165 RPAP1Q9BWH6 1393 aaPredicted RBP22.35■■□□□ 1.17
PVT1-220ENST00000524165 DOCK3Q8IZD9 2030 aa22.35■■□□□ 1.17
PVT1-220ENST00000524165 GNAI1P63096 354 aa22.34■■□□□ 1.17
PVT1-220ENST00000524165 FKBP1CQ5VVH2 108 aa22.34■■□□□ 1.17
PVT1-220ENST00000524165 FAM109BQ6ICB4 259 aaPredicted RBP22.34■■□□□ 1.17
PVT1-220ENST00000524165 C8orf58Q8NAV2 365 aa22.34■■□□□ 1.17
PVT1-220ENST00000524165 DIS3LQ8TF46 1054 aaKnown RBP22.34■■□□□ 1.17
PVT1-220ENST00000524165 ZNF341Q9BYN7 854 aa22.34■■□□□ 1.17
PVT1-220ENST00000524165 CACNB3P54284 484 aa22.33■■□□□ 1.17
PVT1-220ENST00000524165 IFIT5Q13325 482 aaKnown RBP22.33■■□□□ 1.17
PVT1-220ENST00000524165 INPP5BP32019 993 aa22.32■■□□□ 1.16
PVT1-220ENST00000524165 UBE2OQ9C0C9 1292 aaKnown RBP22.32■■□□□ 1.16
PVT1-220ENST00000524165 TMOD2Q9NZR1 351 aa22.32■■□□□ 1.16
PVT1-220ENST00000524165 CYP2C8P10632 490 aa22.31■■□□□ 1.16
PVT1-220ENST00000524165 SYN1P17600 705 aa22.31■■□□□ 1.16
PVT1-220ENST00000524165 GPAT2Q6NUI2 795 aa22.31■■□□□ 1.16
PVT1-220ENST00000524165 MYH16Q9H6N6 1097 aa22.31■■□□□ 1.16
PVT1-220ENST00000524165 DDX60LQ5H9U9 1706 aaKnown RBP22.31■■□□□ 1.16
PVT1-220ENST00000524165 LAMA2P24043 3122 aaKnown RBP22.3■■□□□ 1.16
PVT1-220ENST00000524165 POTEB2H3BUK9 544 aa22.3■■□□□ 1.16
PVT1-220ENST00000524165 HIBADHP31937 336 aaKnown RBP22.3■■□□□ 1.16
PVT1-220ENST00000524165 CALD1Q05682 793 aaKnown RBP22.3■■□□□ 1.16
PVT1-220ENST00000524165 TEKT1Q969V4 418 aa22.3■■□□□ 1.16
PVT1-220ENST00000524165 GUCD1Q96NT3 240 aa22.3■■□□□ 1.16
PVT1-220ENST00000524165 NBPF3Q9H094 633 aa22.3■■□□□ 1.16
PVT1-220ENST00000524165 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.3■■□□□ 1.162e-6■■■■□ 20.1
PVT1-220ENST00000524165 ZNF112Q9UJU3 913 aa22.3■■□□□ 1.16
PVT1-220ENST00000524165 EYSQ5T1H1 3165 aa22.3■■□□□ 1.16
PVT1-220ENST00000524165 TTC28Q96AY4 2481 aa22.3■■□□□ 1.16
PVT1-220ENST00000524165 TNPO2O14787 897 aaKnown RBP22.29■■□□□ 1.16
PVT1-220ENST00000524165 MRIQ9BWK5 157 aa22.29■■□□□ 1.16
PVT1-220ENST00000524165 AK9Q5TCS8 1911 aa22.29■■□□□ 1.16
PVT1-220ENST00000524165 CXCL11O14625 94 aa22.28■■□□□ 1.16
PVT1-220ENST00000524165 PLIN1O60240 522 aa22.28■■□□□ 1.16
PVT1-220ENST00000524165 NOL9Q5SY16 702 aaKnown RBP22.28■■□□□ 1.16
PVT1-220ENST00000524165 MIGA2Q7L4E1 593 aa22.28■■□□□ 1.16
PVT1-220ENST00000524165 FAM84BQ96KN1 310 aaPredicted RBP22.28■■□□□ 1.16
PVT1-220ENST00000524165 ZDHHC15Q96MV8 337 aa22.28■■□□□ 1.16
PVT1-220ENST00000524165 GYG1P46976 350 aa22.27■■□□□ 1.16
PVT1-220ENST00000524165 UBE4AQ14139 1066 aa22.27■■□□□ 1.16
PVT1-220ENST00000524165 GRIK5Q16478 980 aa22.27■■□□□ 1.16
PVT1-220ENST00000524165 STK31Q9BXU1 1019 aa22.27■■□□□ 1.16
PVT1-220ENST00000524165 COL2A1P02458 1487 aaPredicted RBP22.27■■□□□ 1.16
PVT1-220ENST00000524165 FOXO4P98177 505 aa22.26■■□□□ 1.15
PVT1-220ENST00000524165 RALBP1Q15311 655 aa22.26■■□□□ 1.15
PVT1-220ENST00000524165 LDHAL6AQ6ZMR3 332 aa22.26■■□□□ 1.15
PVT1-220ENST00000524165 TBC1D22AQ8WUA7 517 aa22.26■■□□□ 1.15
PVT1-220ENST00000524165 C11orf49Q9H6J7 331 aa22.26■■□□□ 1.15
PVT1-220ENST00000524165 SLC45A1Q9Y2W3 748 aa22.26■■□□□ 1.15
PVT1-220ENST00000524165 PRUNE2Q8WUY3 3088 aa22.25■■□□□ 1.15
PVT1-220ENST00000524165 FASTKD5Q7L8L6 764 aaKnown RBP22.25■■□□□ 1.15
PVT1-220ENST00000524165 LINS1Q8NG48 757 aa22.25■■□□□ 1.15
PVT1-220ENST00000524165 COA7Q96BR5 231 aa22.25■■□□□ 1.15
PVT1-220ENST00000524165 PTPRFP10586 1907 aa22.25■■□□□ 1.15
PVT1-220ENST00000524165 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.15
PVT1-220ENST00000524165 APOBEC3HQ6NTF7 200 aaKnown RBP22.24■■□□□ 1.15
PVT1-220ENST00000524165 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
PVT1-220ENST00000524165 CNNM1Q9NRU3 951 aa22.24■■□□□ 1.15
PVT1-220ENST00000524165 CHMP3Q9Y3E7 222 aa22.24■■□□□ 1.15
PVT1-220ENST00000524165 FAM151AQ8WW52 585 aa22.23■■□□□ 1.15
PVT1-220ENST00000524165 TAOK2Q9UL54 1235 aa22.23■■□□□ 1.15
PVT1-220ENST00000524165 CACNA1FO60840 1977 aa22.23■■□□□ 1.15
PVT1-220ENST00000524165 A0A0G2JLL6 359 aaPredicted RBP22.22■■□□□ 1.15
PVT1-220ENST00000524165 HMGCRP04035 888 aa22.22■■□□□ 1.15
PVT1-220ENST00000524165 CCDC57Q2TAC2 916 aa22.22■■□□□ 1.15
PVT1-220ENST00000524165 G2E3Q7L622 706 aa22.22■■□□□ 1.15
PVT1-220ENST00000524165 PRRT2Q7Z6L0 340 aaPredicted RBP22.22■■□□□ 1.15
PVT1-220ENST00000524165 ZNF594Q96JF6 807 aaPredicted RBP22.22■■□□□ 1.15
PVT1-220ENST00000524165 TAF7LQ5H9L4 462 aa22.21■■□□□ 1.15
PVT1-220ENST00000524165 DNAAF4Q8WXU2 420 aa22.21■■□□□ 1.15
PVT1-220ENST00000524165 HMX1Q9NP08 348 aaPredicted RBP22.21■■□□□ 1.15
PVT1-220ENST00000524165 OGDHLQ9ULD0 1010 aa22.21■■□□□ 1.15
PVT1-220ENST00000524165 ADAMTS8Q9UP79 889 aa22.21■■□□□ 1.15
PVT1-220ENST00000524165 MAST3O60307 1309 aa22.21■■□□□ 1.15
PVT1-220ENST00000524165 HHIPL2Q6UWX4 724 aa22.2■■□□□ 1.14
PVT1-220ENST00000524165 LMBR1LQ6UX01 489 aa22.2■■□□□ 1.14
PVT1-220ENST00000524165 SMCR8Q8TEV9 937 aaPredicted RBP22.2■■□□□ 1.14
PVT1-220ENST00000524165 SUGT1Q9Y2Z0 365 aa22.2■■□□□ 1.14
PVT1-220ENST00000524165 SLC4A2P04920 1241 aa22.19■■□□□ 1.14
PVT1-220ENST00000524165 COL9A1P20849 921 aa22.19■■□□□ 1.14
PVT1-220ENST00000524165 FBXO33Q7Z6M2 555 aa22.19■■□□□ 1.14
PVT1-220ENST00000524165 VPS37DQ86XT2 251 aa22.19■■□□□ 1.14
PVT1-220ENST00000524165 SYMPKQ92797 1274 aaKnown RBP22.19■■□□□ 1.14
PVT1-220ENST00000524165 FAM161BQ96MY7 647 aa22.19■■□□□ 1.14
PVT1-220ENST00000524165 MUC3AQ02505 3323 aa22.19■■□□□ 1.14
PVT1-220ENST00000524165 PFASO15067 1338 aa22.18■■□□□ 1.14
PVT1-220ENST00000524165 CHAF1AQ13111 956 aaPredicted RBP22.18■■□□□ 1.14
PVT1-220ENST00000524165 ZNF697Q5TEC3 545 aa22.18■■□□□ 1.14
PVT1-220ENST00000524165 FLIIQ13045 1269 aa22.17■■□□□ 1.14
PVT1-220ENST00000524165 GADL1Q6ZQY3 521 aa22.17■■□□□ 1.14
PVT1-220ENST00000524165 MAFAQ8NHW3 353 aaPredicted RBP22.17■■□□□ 1.14
PVT1-220ENST00000524165 IQSEC3Q9UPP2 1182 aaPredicted RBP22.17■■□□□ 1.14
PVT1-220ENST00000524165 ZHX2Q9Y6X8 837 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms