RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 MAP3K9P80192 1104 aa21.02■□□□□ 0.96
SQLE-205ENST00000521232 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.02■□□□□ 0.96
SQLE-205ENST00000521232 FAM151AQ8WW52 585 aa21.02■□□□□ 0.96
SQLE-205ENST00000521232 HOOK2Q96ED9 719 aa21.02■□□□□ 0.96
SQLE-205ENST00000521232 HMG20BQ9P0W2 317 aa21.02■□□□□ 0.96
SQLE-205ENST00000521232 OS9Q13438 667 aaPredicted RBP21.01■□□□□ 0.95
SQLE-205ENST00000521232 TNNI3KQ59H18 835 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 CEP85Q6P2H3 762 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 SPATA5Q8NB90 893 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.01■□□□□ 0.952e-9■□□□□ 11
SQLE-205ENST00000521232 ABHD8Q96I13 439 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 CFHR5Q9BXR6 569 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 USP40Q9NVE5 1235 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.01■□□□□ 0.95
SQLE-205ENST00000521232 RCAN3Q9UKA8 241 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 FPGT-TNNI3KV9GXZ4 949 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 GAKO14976 1311 aa21.01■□□□□ 0.95
SQLE-205ENST00000521232 LAMB1P07942 1786 aa21■□□□□ 0.95
SQLE-205ENST00000521232 RPAP1Q9BWH6 1393 aaPredicted RBP21■□□□□ 0.95
SQLE-205ENST00000521232 OTOFQ9HC10 1997 aa21■□□□□ 0.95
SQLE-205ENST00000521232 UQCRFS1P1P0C7P4 283 aa21■□□□□ 0.95
SQLE-205ENST00000521232 GJA5P36382 358 aa21■□□□□ 0.95
SQLE-205ENST00000521232 SLF2Q8IX21 1173 aa21■□□□□ 0.95
SQLE-205ENST00000521232 TBC1D8O95759 1140 aa20.99■□□□□ 0.95
SQLE-205ENST00000521232 NFIAQ12857 509 aa20.99■□□□□ 0.95
SQLE-205ENST00000521232 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
SQLE-205ENST00000521232 DZIP1Q86YF9 867 aaKnown RBP20.99■□□□□ 0.95
SQLE-205ENST00000521232 ELP3Q9H9T3 547 aa20.99■□□□□ 0.95
SQLE-205ENST00000521232 FAM198AQ9UFP1 575 aa20.99■□□□□ 0.95
SQLE-205ENST00000521232 ALDH1A1P00352 501 aa20.98■□□□□ 0.95
SQLE-205ENST00000521232 MCAMP43121 646 aa20.98■□□□□ 0.95
SQLE-205ENST00000521232 VGLL4Q14135 290 aa20.98■□□□□ 0.95
SQLE-205ENST00000521232 NOM1Q5C9Z4 860 aaKnown RBP20.98■□□□□ 0.95
SQLE-205ENST00000521232 PI16Q6UXB8 463 aa20.98■□□□□ 0.95
SQLE-205ENST00000521232 IFNL1Q8IU54 200 aa20.98■□□□□ 0.95
SQLE-205ENST00000521232 OPTNQ96CV9 577 aa20.98■□□□□ 0.95
SQLE-205ENST00000521232 IDI2Q9BXS1 227 aa20.98■□□□□ 0.95
SQLE-205ENST00000521232 MCOLN1Q9GZU1 580 aa20.98■□□□□ 0.95
SQLE-205ENST00000521232 TESPA1A2RU30 521 aaPredicted RBP20.97■□□□□ 0.95
SQLE-205ENST00000521232 MECOMQ03112 1051 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 TCP10Q12799 353 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 DGKZQ13574 1117 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 CCDC158Q5M9N0 1113 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 DCAF15Q66K64 600 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 ZNF384Q8TF68 577 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 DBNDD2Q9BQY9 259 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 DDX19BQ9UMR2 479 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 CSADQ9Y600 493 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 AK9Q5TCS8 1911 aa20.97■□□□□ 0.95
SQLE-205ENST00000521232 TBC1D9Q6ZT07 1266 aa20.96■□□□□ 0.95
SQLE-205ENST00000521232 NSUN4Q96CB9 384 aaKnown RBP20.96■□□□□ 0.95
SQLE-205ENST00000521232 ZNF512BQ96KM6 892 aaPredicted RBP20.96■□□□□ 0.95
SQLE-205ENST00000521232 COG6Q9Y2V7 657 aa20.96■□□□□ 0.95
SQLE-205ENST00000521232 MROH7-TTC4A0A0A0MT08 1334 aa20.96■□□□□ 0.95
SQLE-205ENST00000521232 GPR75-ASB3A0A0A6YYF3 556 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 GPR25O00155 361 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 IGF2BP3O00425 579 aaKnown RBP eCLIP20.95■□□□□ 0.94
SQLE-205ENST00000521232 ENTPD3O75355 529 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 TTC39AQ5SRH9 613 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 MIGA2Q7L4E1 593 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 ZFPM1Q8IX07 1006 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 RPAP2Q8IXW5 612 aaPredicted RBP20.95■□□□□ 0.94
SQLE-205ENST00000521232 MS4A4AQ96JQ5 239 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 WRNIP1Q96S55 665 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 ZNF341Q9BYN7 854 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 ZBTB40Q9NUA8 1239 aa20.95■□□□□ 0.94
SQLE-205ENST00000521232 LDHCP07864 332 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 BTDP43251 543 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 GSTO1P78417 241 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 OTUD7BQ6GQQ9 843 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 ZNF296Q8WUU4 475 aaPredicted RBP20.94■□□□□ 0.94
SQLE-205ENST00000521232 CNKSR2Q8WXI2 1034 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 ZKSCAN4Q969J2 545 aaPredicted RBP20.94■□□□□ 0.94
SQLE-205ENST00000521232 EAF2Q96CJ1 260 aaPredicted RBP20.94■□□□□ 0.94
SQLE-205ENST00000521232 PTPN18Q99952 460 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 R3HDMLQ9H3Y0 253 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 ZNF112Q9UJU3 913 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 SNCAIPQ9Y6H5 919 aa20.94■□□□□ 0.94
SQLE-205ENST00000521232 SPDYE5A6NIY4 337 aa20.93■□□□□ 0.94
SQLE-205ENST00000521232 WDHD1O75717 1129 aaPredicted RBP20.93■□□□□ 0.94
SQLE-205ENST00000521232 RGS3P49796 1198 aa20.93■□□□□ 0.94
SQLE-205ENST00000521232 ERC1Q8IUD2 1116 aa20.93■□□□□ 0.94
SQLE-205ENST00000521232 CHMP4BQ9H444 224 aaKnown RBP20.93■□□□□ 0.94
SQLE-205ENST00000521232 DBNLQ9UJU6 430 aaKnown RBP20.93■□□□□ 0.94
SQLE-205ENST00000521232 RFX7Q2KHR2 1363 aa20.93■□□□□ 0.94
SQLE-205ENST00000521232 MAP4K4O95819 1239 aaPredicted RBP20.92■□□□□ 0.94
SQLE-205ENST00000521232 GTF2A2P52657 109 aa20.92■□□□□ 0.94
SQLE-205ENST00000521232 RHBDL3P58872 404 aa20.92■□□□□ 0.94
SQLE-205ENST00000521232 PDE3AQ14432 1141 aa20.92■□□□□ 0.94
SQLE-205ENST00000521232 CTU1Q7Z7A3 348 aaKnown RBP20.92■□□□□ 0.94
SQLE-205ENST00000521232 ERO1BQ86YB8 467 aa20.92■□□□□ 0.94
SQLE-205ENST00000521232 CCDC8Q9H0W5 538 aaPredicted RBP20.92■□□□□ 0.94
SQLE-205ENST00000521232 SNRKQ9NRH2 765 aa20.92■□□□□ 0.94
SQLE-205ENST00000521232 RAI14Q9P0K7 980 aa20.92■□□□□ 0.94
SQLE-205ENST00000521232 LRP2BPQ9P2M1 347 aa20.92■□□□□ 0.94
SQLE-205ENST00000521232 EXOC6BQ9Y2D4 811 aa20.92■□□□□ 0.94
SQLE-205ENST00000521232 IGSF3O75054 1194 aa20.91■□□□□ 0.94
SQLE-205ENST00000521232 NPM3O75607 178 aaKnown RBP20.91■□□□□ 0.94
SQLE-205ENST00000521232 HSP90AB4PQ58FF6 505 aa20.91■□□□□ 0.94
SQLE-205ENST00000521232 OTUD5Q96G74 571 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms