RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	CHAC2	Q8WUX2	184 aa		4.88	□□□□□ -1.63
SREK1-208	ENST00000520580	CRISPLD1	Q9H336	500 aa		4.88	□□□□□ -1.63
SREK1-208	ENST00000520580	PRDM16	Q9HAZ2	1276 aa		4.88	□□□□□ -1.63
SREK1-208	ENST00000520580	ZFYVE1	Q9HBF4	777 aa		4.88	□□□□□ -1.63
SREK1-208	ENST00000520580	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.88	□□□□□ -1.63
SREK1-208	ENST00000520580	PLAA	Q9Y263	795 aa		4.88	□□□□□ -1.63
SREK1-208	ENST00000520580	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.88	□□□□□ -1.63
SREK1-208	ENST00000520580	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	4.88	□□□□□ -1.63
SREK1-208	ENST00000520580	SMPD1	P17405	629 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	PLAUR	Q03405	335 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	DHX32	Q7L7V1	743 aa	Known RBP	4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	JMY	Q8N9B5	988 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	GAL3ST3	Q96A11	431 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	TLR7	Q9NYK1	1049 aa	Known RBP	4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	TTLL8	A6PVC2	850 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	PDE2A	O00408	941 aa	Predicted RBP	4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	PPP2R3A	Q06190	1150 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	TM4SF20	Q53R12	229 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	MAP1S	Q66K74	1059 aa	Predicted RBP	4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	LLGL2	Q6P1M3	1020 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	ZNF598	Q86UK7	904 aa	Known RBP	4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	SULF2	Q8IWU5	870 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	CCAR1	Q8IX12	1150 aa	Known RBP	4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	MFSD3	Q96ES6	412 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	TMX1	Q9H3N1	280 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580	HCN2	Q9UL51	889 aa		4.87	□□□□□ -1.63
SREK1-208	ENST00000520580		A0A087X0B3	334 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	CAPN5	O15484	640 aa	Predicted RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	RAPGEF3	O95398	923 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	IMPDH2	P12268	514 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	BIRC2	Q13490	618 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	TTF1	Q15361	905 aa	Predicted RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	MAP9	Q49MG5	647 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	WDR44	Q5JSH3	913 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	VHLL	Q6RSH7	139 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	EEPD1	Q7L9B9	569 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	ZSWIM2	Q8NEG5	633 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	NINJ1	Q92982	152 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	SMAD5	Q99717	465 aa	Known RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	ZC3H12C	Q9C0D7	883 aa	Known RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	FAM86C1	Q9NVL1	165 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	UPK3BL1	B0FP48	263 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	UPK3BL2	E5RIL1	263 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	KATNA1	O75449	491 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	GUCY2C	P25092	1073 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	SOX18	P35713	384 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	KCNQ4	P56696	695 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	RHBDL3	P58872	404 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	EFHC2	Q5JST6	749 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	PERM1	Q5SV97	790 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	ADAMTSL4	Q6UY14	1074 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	CCDC84	Q86UT8	332 aa	Predicted RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	TMEM102	Q8N9M5	508 aa	Predicted RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	RBBP8NL	Q8NC74	664 aa	Predicted RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	RPS6KC1	Q96S38	1066 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	POP1	Q99575	1024 aa	Known RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	SLC30A3	Q99726	388 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	C11orf16	Q9NQ32	467 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	CORIN	Q9Y5Q5	1042 aa		4.86	□□□□□ -1.63
SREK1-208	ENST00000520580	ATXN7	O15265	892 aa	Predicted RBP	4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	KCNQ2	O43526	872 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	F11	P03951	625 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	BMP1	P13497	986 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	PDE6B	P35913	854 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	RPL6	Q02878	288 aa	Known RBP	4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	TBC1D8B	Q0IIM8	1120 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	SPEM2	Q0P670	501 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	TMEM67	Q5HYA8	995 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	FOXB2	Q5VYV0	432 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	RIPOR1	Q6ZS17	1223 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	NLRP8	Q86W28	1048 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	ZSCAN1	Q8NBB4	408 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	SPATA9	Q9BWV2	254 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	CAAP1	Q9H8G2	361 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	EHMT1	Q9H9B1	1298 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	CYP8B1	Q9UNU6	501 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	SAMM50	Q9Y512	469 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	EFS	O43281	561 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	ADCY3	O60266	1144 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	MAPT	P10636	758 aa	Known RBP	4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	NME2	P22392	152 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	ZNF423	Q2M1K9	1284 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	SAMD5	Q5TGI4	173 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	CEP135	Q66GS9	1140 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	CNNM4	Q6P4Q7	775 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	ATL2	Q8NHH9	583 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	C8orf48	Q96LL4	319 aa		4.85	□□□□□ -1.63
SREK1-208	ENST00000520580	ZBTB42	B2RXF5	422 aa		4.84	□□□□□ -1.63
SREK1-208	ENST00000520580	THBS1	P07996	1170 aa		4.84	□□□□□ -1.63
SREK1-208	ENST00000520580	ACR	P10323	421 aa		4.84	□□□□□ -1.63
SREK1-208	ENST00000520580	CD33	P20138	364 aa		4.84	□□□□□ -1.63
SREK1-208	ENST00000520580	GUCY2F	P51841	1108 aa		4.84	□□□□□ -1.63
SREK1-208	ENST00000520580	PPP2R5A	Q15172	486 aa		4.84	□□□□□ -1.63
SREK1-208	ENST00000520580	SLC10A6	Q3KNW5	377 aa		4.84	□□□□□ -1.63
SREK1-208	ENST00000520580	HGSNAT	Q68CP4	663 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms