RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
VEGFA-219ENST00000518824 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
VEGFA-219ENST00000518824 ZAP70P43403 619 aa16.35■□□□□ 0.21
VEGFA-219ENST00000518824 TCP10Q12799 353 aa16.35■□□□□ 0.21
VEGFA-219ENST00000518824 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
VEGFA-219ENST00000518824 CRBNQ96SW2 442 aa16.35■□□□□ 0.21
VEGFA-219ENST00000518824 FAM198AQ9UFP1 575 aa16.35■□□□□ 0.21
VEGFA-219ENST00000518824 PCDHB15Q9Y5E8 787 aa16.35■□□□□ 0.21
VEGFA-219ENST00000518824 HSPA8P11142 646 aaKnown RBP16.34■□□□□ 0.21
VEGFA-219ENST00000518824 MAP2K1Q02750 393 aaPredicted RBP16.34■□□□□ 0.21
VEGFA-219ENST00000518824 NOGQ13253 232 aa16.34■□□□□ 0.21
VEGFA-219ENST00000518824 TNFAIP1Q13829 316 aa16.34■□□□□ 0.21
VEGFA-219ENST00000518824 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
VEGFA-219ENST00000518824 CCDC158Q5M9N0 1113 aa16.34■□□□□ 0.21
VEGFA-219ENST00000518824 ARMC9Q7Z3E5 817 aa16.34■□□□□ 0.21
VEGFA-219ENST00000518824 DZIP1Q86YF9 867 aaKnown RBP16.34■□□□□ 0.21
VEGFA-219ENST00000518824 ZGPATQ8N5A5 531 aaKnown RBP16.34■□□□□ 0.21
VEGFA-219ENST00000518824 CCDC102AQ96A19 550 aa16.34■□□□□ 0.21
VEGFA-219ENST00000518824 NSUN4Q96CB9 384 aaKnown RBP16.34■□□□□ 0.21
VEGFA-219ENST00000518824 PIH1D3Q9NQM4 214 aaKnown RBP16.34■□□□□ 0.21
VEGFA-219ENST00000518824 USP40Q9NVE5 1235 aa16.34■□□□□ 0.21
VEGFA-219ENST00000518824 SMARCA5O60264 1052 aaPredicted RBP16.33■□□□□ 0.2
VEGFA-219ENST00000518824 HMMRO75330 724 aa16.33■□□□□ 0.2
VEGFA-219ENST00000518824 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
VEGFA-219ENST00000518824 LBX1P52954 281 aa16.33■□□□□ 0.2
VEGFA-219ENST00000518824 SUPT20HL1Q3ZLR7 823 aa16.33■□□□□ 0.2
VEGFA-219ENST00000518824 ERC1Q8IUD2 1116 aa16.33■□□□□ 0.2
VEGFA-219ENST00000518824 CSRNP1Q96S65 589 aa16.33■□□□□ 0.2
VEGFA-219ENST00000518824 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.2
VEGFA-219ENST00000518824 MROH7-TTC4A0A0A0MT08 1334 aa16.33■□□□□ 0.2
VEGFA-219ENST00000518824 GJA5P36382 358 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 BTDP43251 543 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 TNNI2P48788 182 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 RFX7Q2KHR2 1363 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 SPTY2D1Q68D10 685 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-219ENST00000518824 ADGRA1Q86SQ6 560 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 FAM83AQ86UY5 434 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 AIDAQ96BJ3 306 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 FAM163AQ96GL9 167 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-219ENST00000518824 ZNF512BQ96KM6 892 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-219ENST00000518824 CHMP4BQ9H444 224 aaKnown RBP16.32■□□□□ 0.2
VEGFA-219ENST00000518824 DDX4Q9NQI0 724 aaKnown RBP16.32■□□□□ 0.2
VEGFA-219ENST00000518824 TMOD2Q9NZR1 351 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 RAI14Q9P0K7 980 aa16.32■□□□□ 0.2
VEGFA-219ENST00000518824 PPP1R12BO60237 982 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-219ENST00000518824 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-219ENST00000518824 RHBDL3P58872 404 aa16.31■□□□□ 0.2
VEGFA-219ENST00000518824 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
VEGFA-219ENST00000518824 FKBP1CQ5VVH2 108 aa16.31■□□□□ 0.2
VEGFA-219ENST00000518824 SH3BP5LQ7L8J4 393 aa16.31■□□□□ 0.2
VEGFA-219ENST00000518824 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
VEGFA-219ENST00000518824 LRP2BPQ9P2M1 347 aa16.31■□□□□ 0.2
VEGFA-219ENST00000518824 AK9Q5TCS8 1911 aa16.31■□□□□ 0.2
VEGFA-219ENST00000518824 MAST2Q6P0Q8 1798 aa16.31■□□□□ 0.2
VEGFA-219ENST00000518824 GPR75-ASB3A0A0A6YYF3 556 aa16.3■□□□□ 0.2
VEGFA-219ENST00000518824 RAB11FIP3O75154 756 aa16.3■□□□□ 0.2
VEGFA-219ENST00000518824 CTCFP49711 727 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-219ENST00000518824 RGS3P49796 1198 aa16.3■□□□□ 0.2
VEGFA-219ENST00000518824 SPRYD7Q5W111 196 aa16.3■□□□□ 0.2
VEGFA-219ENST00000518824 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-219ENST00000518824 MIGA2Q7L4E1 593 aa16.3■□□□□ 0.2
VEGFA-219ENST00000518824 FAM151AQ8WW52 585 aa16.3■□□□□ 0.2
VEGFA-219ENST00000518824 CLASRPQ8N2M8 674 aaKnown RBP16.29■□□□□ 0.2
VEGFA-219ENST00000518824 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
VEGFA-219ENST00000518824 EDC3Q96F86 508 aaKnown RBP16.29■□□□□ 0.2
VEGFA-219ENST00000518824 ELP3Q9H9T3 547 aa16.29■□□□□ 0.2
VEGFA-219ENST00000518824 DOCK2Q92608 1830 aa16.29■□□□□ 0.2
VEGFA-219ENST00000518824 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-219ENST00000518824 IREB2P48200 963 aaKnown RBP16.28■□□□□ 0.2
VEGFA-219ENST00000518824 PICALMQ13492 652 aa16.28■□□□□ 0.2
VEGFA-219ENST00000518824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.28■□□□□ 0.22e-42■□□□□ 11.1
VEGFA-219ENST00000518824 WNK4Q96J92 1243 aa16.28■□□□□ 0.2
VEGFA-219ENST00000518824 IDI2Q9BXS1 227 aa16.28■□□□□ 0.2
VEGFA-219ENST00000518824 DCTPP1Q9H773 170 aa16.28■□□□□ 0.2
VEGFA-219ENST00000518824 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
VEGFA-219ENST00000518824 CDK5RAP2Q96SN8 1893 aa16.28■□□□□ 0.2
VEGFA-219ENST00000518824 ATRNL1Q5VV63 1379 aa16.27■□□□□ 0.2
VEGFA-219ENST00000518824 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-219ENST00000518824 TRPA1O75762 1119 aa16.27■□□□□ 0.2
VEGFA-219ENST00000518824 IFIT2P09913 472 aaKnown RBP16.27■□□□□ 0.2
VEGFA-219ENST00000518824 VGLL4Q14135 290 aa16.27■□□□□ 0.2
VEGFA-219ENST00000518824 NAA16Q6N069 864 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-219ENST00000518824 ANKRD13AQ8IZ07 590 aa16.27■□□□□ 0.2
VEGFA-219ENST00000518824 SH3RF3Q8TEJ3 882 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-219ENST00000518824 ZKSCAN4Q969J2 545 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-219ENST00000518824 BEGAINQ9BUH8 593 aa16.27■□□□□ 0.2
VEGFA-219ENST00000518824 CASP8AP2Q9UKL3 1982 aa16.27■□□□□ 0.19
VEGFA-219ENST00000518824 IDH1O75874 414 aaKnown RBP16.26■□□□□ 0.19
VEGFA-219ENST00000518824 INPP5BP32019 993 aa16.26■□□□□ 0.19
VEGFA-219ENST00000518824 DYNLL1P63167 89 aaKnown RBP16.26■□□□□ 0.19
VEGFA-219ENST00000518824 GSTO1P78417 241 aa16.26■□□□□ 0.19
VEGFA-219ENST00000518824 MAP3K9P80192 1104 aa16.26■□□□□ 0.19
VEGFA-219ENST00000518824 SLF2Q8IX21 1173 aa16.26■□□□□ 0.19
VEGFA-219ENST00000518824 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
VEGFA-219ENST00000518824 AATFQ9NY61 560 aaKnown RBP eCLIP16.26■□□□□ 0.19
VEGFA-219ENST00000518824 ENTPD3O75355 529 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 CHGBP05060 677 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 LDHCP07864 332 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 SLFNL1Q499Z3 407 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 369.3 ms