RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 RGS3P49796 1198 aa27.69■■■□□ 2.02
NKX6-3-201ENST00000518699 PITPNM2Q9BZ72 1349 aa27.69■■■□□ 2.02
NKX6-3-201ENST00000518699 TRIM6-TRIM34B2RNG4 842 aa27.68■■■□□ 2.02
NKX6-3-201ENST00000518699 MYO1BO43795 1136 aa27.68■■■□□ 2.02
NKX6-3-201ENST00000518699 BTDP43251 543 aa27.68■■■□□ 2.02
NKX6-3-201ENST00000518699 SPDYE2Q495Y8 402 aa27.68■■■□□ 2.02
NKX6-3-201ENST00000518699 ZNF532Q9HCE3 1301 aa27.68■■■□□ 2.02
NKX6-3-201ENST00000518699 POLR2AP24928 1970 aaKnown RBP27.67■■■□□ 2.02
NKX6-3-201ENST00000518699 GGA3Q9NZ52 723 aa27.67■■■□□ 2.02
NKX6-3-201ENST00000518699 ASTN2O75129 1339 aaPredicted RBP27.67■■■□□ 2.02
NKX6-3-201ENST00000518699 RNF113AO15541 343 aaKnown RBP27.65■■■□□ 2.02
NKX6-3-201ENST00000518699 PPP4CP60510 307 aa27.65■■■□□ 2.02
NKX6-3-201ENST00000518699 CERS3Q8IU89 383 aa27.65■■■□□ 2.02
NKX6-3-201ENST00000518699 RILPL2Q969X0 211 aa27.65■■■□□ 2.02
NKX6-3-201ENST00000518699 NOL10Q9BSC4 688 aaKnown RBP27.65■■■□□ 2.02
NKX6-3-201ENST00000518699 TDRD3Q9H7E2 651 aaKnown RBP27.65■■■□□ 2.02
NKX6-3-201ENST00000518699 SDSP20132 328 aa27.64■■■□□ 2.02
NKX6-3-201ENST00000518699 BMP2KLQ5H9B9 411 aa27.64■■■□□ 2.02
NKX6-3-201ENST00000518699 ANGEL2Q5VTE6 544 aaKnown RBP27.64■■■□□ 2.02
NKX6-3-201ENST00000518699 CDC42EP5Q6NZY7 148 aa27.64■■■□□ 2.02
NKX6-3-201ENST00000518699 ZNF70Q9UC06 446 aaPredicted RBP27.64■■■□□ 2.02
NKX6-3-201ENST00000518699 BAG3O95817 575 aa27.63■■■□□ 2.01
NKX6-3-201ENST00000518699 CHGBP05060 677 aa27.63■■■□□ 2.01
NKX6-3-201ENST00000518699 RHBDL3P58872 404 aa27.63■■■□□ 2.01
NKX6-3-201ENST00000518699 APOBEC3FQ8IUX4 373 aaKnown RBP27.63■■■□□ 2.01
NKX6-3-201ENST00000518699 APPBP2Q92624 585 aa27.63■■■□□ 2.01
NKX6-3-201ENST00000518699 CLRN2A0PK11 232 aa27.62■■■□□ 2.01
NKX6-3-201ENST00000518699 PLCG2P16885 1265 aa27.62■■■□□ 2.01
NKX6-3-201ENST00000518699 SLFNL1Q499Z3 407 aa27.62■■■□□ 2.01
NKX6-3-201ENST00000518699 FKBP1CQ5VVH2 108 aa27.62■■■□□ 2.01
NKX6-3-201ENST00000518699 RIOK1Q9BRS2 568 aaKnown RBP27.62■■■□□ 2.01
NKX6-3-201ENST00000518699 AATFQ9NY61 560 aaKnown RBP eCLIP27.62■■■□□ 2.01
NKX6-3-201ENST00000518699 TMOD2Q9NZR1 351 aa27.62■■■□□ 2.01
NKX6-3-201ENST00000518699 CLEC11AQ9Y240 323 aa27.62■■■□□ 2.01
NKX6-3-201ENST00000518699 TOMM70O94826 608 aa27.61■■■□□ 2.01
NKX6-3-201ENST00000518699 CHADLQ6NUI6 762 aa27.61■■■□□ 2.01
NKX6-3-201ENST00000518699 MIGA1Q8NAN2 632 aa27.61■■■□□ 2.01
NKX6-3-201ENST00000518699 RBM46Q8TBY0 533 aaKnown RBP27.61■■■□□ 2.01
NKX6-3-201ENST00000518699 DCPSQ96C86 337 aaKnown RBP27.61■■■□□ 2.01
NKX6-3-201ENST00000518699 USP40Q9NVE5 1235 aa27.61■■■□□ 2.01
NKX6-3-201ENST00000518699 DDX60LQ5H9U9 1706 aaKnown RBP27.61■■■□□ 2.01
NKX6-3-201ENST00000518699 NAV1Q8NEY1 1877 aa27.61■■■□□ 2.01
NKX6-3-201ENST00000518699 ZMYM1Q5SVZ6 1142 aa27.6■■■□□ 2.01
NKX6-3-201ENST00000518699 MAGEB6P1A0A0J9YX57 407 aa27.6■■■□□ 2.01
NKX6-3-201ENST00000518699 TNFAIP1Q13829 316 aa27.6■■■□□ 2.01
NKX6-3-201ENST00000518699 IDI2Q9BXS1 227 aa27.6■■■□□ 2.01
NKX6-3-201ENST00000518699 HIP1O00291 1037 aa27.59■■■□□ 2.01
NKX6-3-201ENST00000518699 WDHD1O75717 1129 aaPredicted RBP27.59■■■□□ 2.01
NKX6-3-201ENST00000518699 MAP1SQ66K74 1059 aaPredicted RBP27.59■■■□□ 2.01
NKX6-3-201ENST00000518699 SMC1BQ8NDV3 1235 aa27.59■■■□□ 2.01
NKX6-3-201ENST00000518699 VEZTQ9HBM0 779 aa27.59■■■□□ 2.01
NKX6-3-201ENST00000518699 DYNLL1P63167 89 aaKnown RBP27.58■■■□□ 2.01
NKX6-3-201ENST00000518699 SULF1Q8IWU6 871 aa27.58■■■□□ 2.01
NKX6-3-201ENST00000518699 SH3RF3Q8TEJ3 882 aaPredicted RBP27.58■■■□□ 2.01
NKX6-3-201ENST00000518699 OSBP2Q969R2 916 aa27.58■■■□□ 2.01
NKX6-3-201ENST00000518699 PUS7LQ9H0K6 701 aaKnown RBP27.58■■■□□ 2.01
NKX6-3-201ENST00000518699 PPP2R3BQ9Y5P8 575 aa27.58■■■□□ 2.01
NKX6-3-201ENST00000518699 RPAP1Q9BWH6 1393 aaPredicted RBP27.57■■■□□ 2
NKX6-3-201ENST00000518699 COL2A1P02458 1487 aaPredicted RBP27.57■■■□□ 2
NKX6-3-201ENST00000518699 NPM3O75607 178 aaKnown RBP27.57■■■□□ 2
NKX6-3-201ENST00000518699 CACNB3P54284 484 aa27.57■■■□□ 2
NKX6-3-201ENST00000518699 CDC37L1Q7L3B6 337 aa27.57■■■□□ 2
NKX6-3-201ENST00000518699 KRT26Q7Z3Y9 468 aa27.57■■■□□ 2
NKX6-3-201ENST00000518699 FAM83AQ86UY5 434 aa27.57■■■□□ 2
NKX6-3-201ENST00000518699 TEX11Q8IYF3 940 aa27.57■■■□□ 2
NKX6-3-201ENST00000518699 LCORLQ8N3X6 602 aa27.57■■■□□ 2
NKX6-3-201ENST00000518699 CNTNAP1P78357 1384 aa27.57■■■□□ 2
NKX6-3-201ENST00000518699 TRPM7Q96QT4 1865 aa27.56■■■□□ 2
NKX6-3-201ENST00000518699 MBD4O95243 580 aa27.56■■■□□ 2
NKX6-3-201ENST00000518699 AIDAQ96BJ3 306 aa27.56■■■□□ 2
NKX6-3-201ENST00000518699 TNNI2P48788 182 aa27.55■■■□□ 2
NKX6-3-201ENST00000518699 NFIAQ12857 509 aa27.55■■■□□ 2
NKX6-3-201ENST00000518699 HELLSQ9NRZ9 838 aa27.55■■■□□ 2
NKX6-3-201ENST00000518699 DIAPH3Q9NSV4 1193 aa27.55■■■□□ 2
NKX6-3-201ENST00000518699 FAM198AQ9UFP1 575 aa27.55■■■□□ 2
NKX6-3-201ENST00000518699 MYH1P12882 1939 aa27.55■■■□□ 2
NKX6-3-201ENST00000518699 A0A0D9SFI3 127 aa27.54■■■□□ 2
NKX6-3-201ENST00000518699 TCP10L2B9ZVM9 353 aa27.54■■■□□ 2
NKX6-3-201ENST00000518699 ADM5C9JUS6 153 aa27.54■■■□□ 2
NKX6-3-201ENST00000518699 M0R2C6 588 aa27.54■■■□□ 2
NKX6-3-201ENST00000518699 ENTPD3O75355 529 aa27.54■■■□□ 2
NKX6-3-201ENST00000518699 NMIQ13287 307 aaPredicted RBP27.54■■■□□ 2
NKX6-3-201ENST00000518699 FAM227BQ96M60 508 aa27.54■■■□□ 2
NKX6-3-201ENST00000518699 GLIS2Q9BZE0 524 aaPredicted RBP27.54■■■□□ 2
NKX6-3-201ENST00000518699 ARMT1Q9H993 441 aa27.54■■■□□ 2
NKX6-3-201ENST00000518699 FSTL1Q12841 308 aa27.53■■■□□ 2
NKX6-3-201ENST00000518699 SEC62Q99442 399 aaKnown RBP27.53■■■□□ 2
NKX6-3-201ENST00000518699 CRNKL1Q9BZJ0 848 aaKnown RBP27.53■■■□□ 2
NKX6-3-201ENST00000518699 DEFB129Q9H1M3 183 aa27.53■■■□□ 2
NKX6-3-201ENST00000518699 DDX4Q9NQI0 724 aaKnown RBP27.53■■■□□ 2
NKX6-3-201ENST00000518699 GPAA1O43292 621 aa27.52■■■□□ 2
NKX6-3-201ENST00000518699 ITGBL1O95965 494 aaPredicted RBP27.52■■■□□ 2
NKX6-3-201ENST00000518699 RASA3Q14644 834 aa27.52■■■□□ 2
NKX6-3-201ENST00000518699 STRBPQ96SI9 672 aaKnown RBP27.52■■■□□ 2
NKX6-3-201ENST00000518699 SCAF8Q9UPN6 1271 aaKnown RBP27.52■■■□□ 2
NKX6-3-201ENST00000518699 FLT1P17948 1338 aa27.52■■■□□ 2
NKX6-3-201ENST00000518699 USP48Q86UV5 1035 aa27.51■■□□□ 1.99
NKX6-3-201ENST00000518699 FAM151AQ8WW52 585 aa27.51■■□□□ 1.99
NKX6-3-201ENST00000518699 ATRNL1Q5VV63 1379 aa27.51■■□□□ 1.99
NKX6-3-201ENST00000518699 CHMLP26374 656 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms