RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 RAD50Q92878 1312 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 ZNF532Q9HCE3 1301 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 ZNF280AP59817 542 aaPredicted RBP13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 DZIP1Q86YF9 867 aaKnown RBP13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 TTF2Q9UNY4 1162 aaKnown RBP13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 PCDHB13Q9Y5F0 798 aa13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 ZNF541Q9H0D2 1346 aa13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 MYH2Q9UKX2 1941 aa13.78□□□□□ -0.2
ARFGEF1-202ENST00000517955 MROH7-TTC4A0A0A0MT08 1334 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 GPR75-ASB3A0A0A6YYF3 556 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 SGSM2O43147 1006 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 EPB41L2O43491 1005 aaKnown RBP13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 CYP7A1P22680 504 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 NMIQ13287 307 aaPredicted RBP13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 C8orf34Q49A92 452 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 DPY19L2Q6NUT2 758 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 OSBP2Q969R2 916 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 L3MBTL3Q96JM7 780 aaPredicted RBP13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 ZDHHC15Q96MV8 337 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 HDAC9Q9UKV0 1011 aa13.77□□□□□ -0.21
ARFGEF1-202ENST00000517955 A0A0D9SFI3 127 aa13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 MFAP1P55081 439 aaKnown RBP13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 KIAA0825Q8IV33 1275 aa13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 OGFOD1Q8N543 542 aa13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 ZBED3Q96IU2 234 aaPredicted RBP13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 FAM227BQ96M60 508 aa13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 RIOK1Q9BRS2 568 aaKnown RBP13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 ESYT1Q9BSJ8 1104 aa13.76□□□□□ -0.21
ARFGEF1-202ENST00000517955 RPAP1Q9BWH6 1393 aaPredicted RBP13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 GLTPD2A6NH11 291 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 BAG3O95817 575 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 CHGBP05060 677 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 PYGBP11216 843 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 PLCG2P16885 1265 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 CRKP46108 304 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 GMPSP49915 693 aaPredicted RBP13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 DIXDC1Q155Q3 683 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 ADGRA1Q86SQ6 560 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 PUS7LQ9H0K6 701 aaKnown RBP13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 DAGLAQ9Y4D2 1042 aa13.75□□□□□ -0.21
ARFGEF1-202ENST00000517955 GNAT2P19087 354 aa13.74□□□□□ -0.21
ARFGEF1-202ENST00000517955 SCNN1DP51172 638 aa13.74□□□□□ -0.21
ARFGEF1-202ENST00000517955 SLFNL1Q499Z3 407 aa13.74□□□□□ -0.21
ARFGEF1-202ENST00000517955 APOBEC3HQ6NTF7 200 aaKnown RBP13.74□□□□□ -0.21
ARFGEF1-202ENST00000517955 STRBPQ96SI9 672 aaKnown RBP13.74□□□□□ -0.21
ARFGEF1-202ENST00000517955 GPRC5DQ9NZD1 345 aa13.74□□□□□ -0.21
ARFGEF1-202ENST00000517955 CNOT7Q9UIV1 285 aaKnown RBP13.74□□□□□ -0.21
ARFGEF1-202ENST00000517955 GJA3Q9Y6H8 435 aa13.74□□□□□ -0.21
ARFGEF1-202ENST00000517955 CCDC171Q6TFL3 1326 aa13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 M0R2C6 588 aa13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 GPAA1O43292 621 aa13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 DDNO94850 711 aaPredicted RBP13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 RHBDL3P58872 404 aa13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 AIDAQ96BJ3 306 aa13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 SEC62Q99442 399 aaKnown RBP13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
ARFGEF1-202ENST00000517955 SCN4AP35499 1836 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 H7C1D1 291 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 CFAP100Q494V2 611 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 FKBP1CQ5VVH2 108 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 GIMAP6Q6P9H5 292 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 ZNF589Q86UQ0 364 aaPredicted RBP13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 NOL10Q9BSC4 688 aaKnown RBP13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 IL25Q9H293 177 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 MYOZ2Q9NPC6 264 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 WDR90Q96KV7 1748 aa13.72□□□□□ -0.21
ARFGEF1-202ENST00000517955 ZMYM6O95789 1325 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 REC8O95072 547 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 MBD4O95243 580 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 TIE1P35590 1138 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 BTDP43251 543 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 DLGAP5Q15398 846 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 ALX1Q15699 326 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 IFNL1Q8IU54 200 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 LCORLQ8N3X6 602 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 MIGA1Q8NAN2 632 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 PRMT6Q96LA8 375 aaPredicted RBP13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 DSCC1Q9BVC3 393 aa13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 AATFQ9NY61 560 aaKnown RBP eCLIP13.71□□□□□ -0.21
ARFGEF1-202ENST00000517955 WNT10BO00744 389 aa13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 CDC42EP5Q6NZY7 148 aa13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 IDI2Q9BXS1 227 aa13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 CRNKL1Q9BZJ0 848 aaKnown RBP13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 LSG1Q9H089 658 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms