RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 SYNPOQ8N3V7 929 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ST13P5Q8NFI4 369 aaPredicted RBP3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PMEPA1Q969W9 287 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ITPKCQ96DU7 683 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MTMR8Q96EF0 704 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 EXOC2Q96KP1 924 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CEP63Q96MT8 703 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 OSMRQ99650 979 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 GRIP2Q9C0E4 1043 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CEP44Q9C0F1 390 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MIR1-1HGQ9H1L0 117 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZFAND3Q9H8U3 227 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SEC31BQ9NQW1 1179 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZDHHC3Q9NYG2 299 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PCDHB10Q9UN67 800 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 POLR3KQ9Y2Y1 108 aaPredicted RBP3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PCDHB14Q9Y5E9 798 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ROBO2Q9HCK4 1378 aa3.51□□□□□ -1.85
SCARNA11.3-201ENST00000517276 FAM86C2PA6NEL3 165 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PHF20L1A8MW92 1017 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MMP20O60882 483 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CILPO75339 1184 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 LMNB1P20700 586 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TARSP26639 723 aaKnown RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CDC27P30260 824 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RPS26P62854 115 aaKnown RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 STRN3Q13033 797 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 HDAC1Q13547 482 aaPredicted RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MLC1Q15049 377 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZYXQ15942 572 aaKnown RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ARSJQ5FYB0 599 aaPredicted RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 WWC2Q6AWC2 1192 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CLEC4GQ6UXB4 293 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 Q6ZVU0 165 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MPNDQ8N594 471 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SAMD3Q8N6K7 520 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RBBP8NLQ8NC74 664 aaPredicted RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 GRIN3AQ8TCU5 1115 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 STK35Q8TDR2 534 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 LEO1Q8WVC0 666 aaPredicted RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 HOOK2Q96ED9 719 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZNF512BQ96KM6 892 aaPredicted RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 YIPF4Q9BSR8 244 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TRIM8Q9BZR9 551 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ENAMQ9NRM1 1142 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 AASDHPPTQ9NRN7 309 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 BSDC1Q9NW68 430 aaPredicted RBP3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 INTUQ9ULD6 942 aa3.5□□□□□ -1.85
SCARNA11.3-201ENST00000517276 FAM83GA6ND36 823 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 IFRD1O00458 451 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 KHNYNO15037 678 aaKnown RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZIC2O95409 532 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 EYA4O95677 639 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 EGFRP00533 1210 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 FOSP01100 380 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 EPB42P16452 691 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 BMP6P22004 513 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ITPKAP23677 461 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CCNFP41002 786 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 CDK8P49336 464 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PTPN11Q06124 597 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ITKQ08881 620 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 POU4F2Q12837 409 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PIN1Q13526 163 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SLC10A6Q3KNW5 377 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 FAM209AQ5JX71 171 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 YOD1Q5VVQ6 348 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MPRIPQ6WCQ1 1025 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 REXO1Q8N1G1 1221 aaKnown RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZBTB38Q8NAP3 1195 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 OR13H1Q8NG92 308 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RIN3Q8TB24 985 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PNISRQ8TF01 805 aaKnown RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 COG1Q8WTW3 980 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 MRGPRX2Q96LB1 330 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 INSM2Q96T92 566 aaPredicted RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZCCHC2Q9C0B9 1178 aaKnown RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ZNF576Q9H609 170 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PPCSQ9HAB8 311 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 NCOA5Q9HCD5 579 aaKnown RBP3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PRDM10Q9NQV6 1147 aa3.49□□□□□ -1.85
SCARNA11.3-201ENST00000517276 LTBP3Q9NS15 1303 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 A0A096LPE4 126 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 A0A1W2PNR3 127 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 A0A1W2PPZ6 126 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 NRDCO43847 1150 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 SUSD5O60279 629 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RFPL3O75679 317 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 KIF4AO95239 1232 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 ALDH1A1P00352 501 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 IMPDH2P12268 514 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 RPIAP49247 311 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 LMOD3Q0VAK6 560 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 TCIRG1Q13488 830 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 PCBP1Q15365 356 aaKnown RBP eCLIP3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 VPS72Q15906 364 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 HGSNATQ68CP4 663 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 VHLLQ6RSH7 139 aa3.48□□□□□ -1.85
SCARNA11.3-201ENST00000517276 NYAP1Q6ZVC0 841 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms