RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 U2AF2P26368 475 aaKnown RBP eCLIP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 PAFAH1B1P43034 410 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 GNAQP50148 359 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 PLCD1P51178 756 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 GNG11P61952 73 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 TIMM10P62072 90 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 FANCCQ00597 558 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CKAP4Q07065 602 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 APOBRQ0VD83 1088 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SCRN1Q12765 414 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 TOB2Q14106 344 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 MFSD10Q14728 455 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 IQCB1Q15051 598 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 UBE3CQ15386 1083 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPA17Q15506 151 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 TERF2Q15554 542 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CAVIN4Q5BKX8 364 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMEM67Q5HYA8 995 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 METTL24Q5JXM2 366 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZMYM1Q5SVZ6 1142 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 IER5LQ5T953 404 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC9C2Q5TAH2 1124 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NBPF6Q5VWK0 638 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPECC1LQ69YQ0 1117 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CYP26C1Q6V0L0 522 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SYT10Q6XYQ8 523 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 LDHAL6AQ6ZMR3 332 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 BARGINQ6ZT62 677 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 MICALCLQ6ZW33 695 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CDC37L1Q7L3B6 337 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CATIPQ7Z7H3 387 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 VPS37DQ86XT2 251 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 AOPEPQ8N6M6 819 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 IQUBQ8NA54 791 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 LINC00301Q8NCQ3 95 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SMARCC2Q8TAQ2 1214 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZCRB1Q8TBF4 217 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CERKQ8TCT0 537 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NOC3LQ8WTT2 800 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZC3H15Q8WU90 426 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC12Q8WUD4 166 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CACTINQ8WUQ7 758 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 APPBP2Q92624 585 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 RABGGTAQ92696 567 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ESR2Q92731 530 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 FBXW7Q969H0 707 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 FERMT2Q96AC1 680 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SUCLG2Q96I99 432 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NBPF4Q96M43 638 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 FAM227BQ96M60 508 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 PCMTD1Q96MG8 357 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 GSDMAQ96QA5 445 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 PANX2Q96RD6 677 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 RUFY1Q96T51 708 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NUP88Q99567 741 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 PLCD4Q9BRC7 762 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 UBAC1Q9BSL1 405 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CRACR2AQ9BSW2 395 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ALG1Q9BT22 464 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 FUCA2Q9BTY2 467 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NAPBQ9H115 298 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 FOXP1Q9H334 677 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 DEF6Q9H4E7 631 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 C19orf44Q9H6X5 657 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 BMP2KQ9NSY1 1161 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 TCP11L1Q9NUJ3 509 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 RBM28Q9NW13 759 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 LRP2BPQ9P2M1 347 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NRBP1Q9UHY1 535 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 KCNH3Q9ULD8 1083 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ANGEL1Q9UNK9 670 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 TTF2Q9UNY4 1162 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 PA2G4Q9UQ80 394 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 LTN1O94822 1766 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 N4BP2Q86UW6 1770 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SH3TC1Q8TE82 1336 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NCKAP5LQ9HCH0 1330 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NRKQ7Z2Y5 1582 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 LAMA4Q16363 1823 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ADCY9O60503 1353 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ABCC12Q96J65 1359 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYH7P12883 1935 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 OVOS2A0A0G2JMS6 1433 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 XRN1Q8IZH2 1706 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TUBGCP6Q96RT7 1819 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPEF2Q9C093 1822 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 A0A1B0GUL7 405 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 SHTN1A0MZ66 631 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTAGE15A4D2H0 777 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC151A5D8V7 595 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 GOLGA6L10A6NI86 522 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TRIM75PA6NK02 468 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 GOLGA8AA7E2F4 631 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 GOLGA8BA8MQT2 603 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 BIN1O00499 593 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 PES1O00541 588 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 PITPNM1O00562 1244 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 SEMA3EO15041 775 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 N4BP3O15049 544 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 PDE8AO60658 829 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms