RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 KIAA1524Q8TCG1 905 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 GBP1P32455 592 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 CCDC152Q4G0S7 254 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 CRNKL1Q9BZJ0 848 aaKnown RBP14.92□□□□□ -0.02
TCOF1-214ENST00000515035 VCX3BQ9H321 246 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 IMPACTQ9P2X3 320 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 EIF2AK4Q9P2K8 1649 aaKnown RBP14.92□□□□□ -0.02
TCOF1-214ENST00000515035 KRT79Q5XKE5 535 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 RUFY4Q6ZNE9 571 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 C8orf58Q8NAV2 365 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-214ENST00000515035 TRIM14Q14142 442 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 VSIG1Q86XK7 387 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 IFT20Q8IY31 132 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 LRRC45Q96CN5 670 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 SBNO2Q9Y2G9 1366 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 PABPN1LA6NDY0 278 aaKnown RBP14.91□□□□□ -0.02
TCOF1-214ENST00000515035 CPA1P15085 419 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 CALML3P27482 149 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 ARID4AP29374 1257 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-214ENST00000515035 CCDC38Q502W7 563 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 CYP26C1Q6V0L0 522 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 ZNF622Q969S3 477 aaKnown RBP eCLIP14.91□□□□□ -0.021e-6■■□□□ 12.2
TCOF1-214ENST00000515035 SLC4A4Q9Y6R1 1079 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 GCP02774 474 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 TBC1D8BQ0IIM8 1120 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 VPS16Q9H269 839 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 HGSO14964 777 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-214ENST00000515035 CFAP157Q5JU67 520 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 TXNDC16Q9P2K2 825 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 NAPAP54920 295 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 EIF4A2Q14240 407 aaKnown RBP14.91□□□□□ -0.02
TCOF1-214ENST00000515035 CABLES1Q8TDN4 633 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 ACSBG1Q96GR2 724 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 BAIAP2L1Q9UHR4 511 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 DISP1Q96F81 1524 aa14.91□□□□□ -0.02
TCOF1-214ENST00000515035 SLC9C2Q5TAH2 1124 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 SETDB2Q96T68 719 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 NDC80O14777 642 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 ACTN4O43707 911 aaKnown RBP14.9□□□□□ -0.02
TCOF1-214ENST00000515035 KRT2P35908 639 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 SEL1L2Q5TEA6 688 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 VCXQ9H320 206 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 FAM114A2Q9NRY5 505 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 ABCC1P33527 1531 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 FAM173BQ6P4H8 233 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 LMBRD1Q9NUN5 540 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 RFC1P35251 1148 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-214ENST00000515035 RNASE9P60153 205 aaKnown RBP14.9□□□□□ -0.02
TCOF1-214ENST00000515035 ATP2B3Q16720 1220 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 FYB2Q5VWT5 728 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 SND1Q7KZF4 910 aaKnown RBP eCLIP14.9□□□□□ -0.02
TCOF1-214ENST00000515035 TTC16Q8NEE8 873 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 CHPF2Q9P2E5 772 aa14.9□□□□□ -0.02
TCOF1-214ENST00000515035 POLR3AO14802 1390 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-214ENST00000515035 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 HS2ST1Q7LGA3 356 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 MICAL1Q8TDZ2 1067 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 CDCA7Q9BWT1 371 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-214ENST00000515035 PAG1Q9NWQ8 432 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 SSX2IPQ9Y2D8 614 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
TCOF1-214ENST00000515035 GRM8O00222 908 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 ZNF500O60304 480 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-214ENST00000515035 ALDH1L1O75891 902 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 CYP7A1P22680 504 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 MCM7P33993 719 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 RAPGEF1Q13905 1077 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 CEP170Q5SW79 1584 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 ARHGEF2Q92974 986 aaKnown RBP14.89□□□□□ -0.03
TCOF1-214ENST00000515035 MCUR1Q96AQ8 359 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 PA2G4Q9UQ80 394 aaKnown RBP14.89□□□□□ -0.03
TCOF1-214ENST00000515035 FBLN1P23142 703 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 GPR161Q8N6U8 529 aaKnown RBP14.89□□□□□ -0.03
TCOF1-214ENST00000515035 NOC4LQ9BVI4 516 aaKnown RBP14.89□□□□□ -0.03
TCOF1-214ENST00000515035 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 DTHD1Q6ZMT9 781 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 FMNL3Q8IVF7 1028 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.03
TCOF1-214ENST00000515035 INF2Q27J81 1249 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 FAM184BQ9ULE4 1060 aa14.89□□□□□ -0.03
TCOF1-214ENST00000515035 RAD50Q92878 1312 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 GADD45BO75293 160 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-214ENST00000515035 TTLL12Q14166 644 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-214ENST00000515035 LEO1Q8WVC0 666 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-214ENST00000515035 MYCBPQ99417 103 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-214ENST00000515035 POLKQ9UBT6 870 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 ATP7AQ04656 1500 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 PPARDQ03181 441 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 TMTC1Q8IUR5 882 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 CEP120Q8N960 986 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 XAGE3Q8WTP9 111 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 SECISBP2LQ93073 1101 aaKnown RBP14.88□□□□□ -0.03
TCOF1-214ENST00000515035 PIK3C2GO75747 1445 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 NEO1Q92859 1461 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 GCKP35557 465 aa14.88□□□□□ -0.03
TCOF1-214ENST00000515035 GKAP1Q5VSY0 366 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-214ENST00000515035 NLRP3Q96P20 1036 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 343.7 ms