RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	GPR75-ASB3	A0A0A6YYF3	556 aa		11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	RNF113A	O15541	343 aa	Known RBP	11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	BAG3	O95817	575 aa		11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	ZFY	P08048	801 aa	Predicted RBP	11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	ADD2	P35612	726 aa		11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	UBE3C	Q15386	1083 aa		11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	TICAM2	Q86XR7	235 aa		11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	NOL10	Q9BSC4	688 aa	Known RBP	11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.95	□□□□□ -0.5
RACK1-233	ENST00000514455	KIF3C	O14782	793 aa		11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	GSPT1	P15170	499 aa	Known RBP	11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	SDS	P20132	328 aa		11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	BTD	P43251	543 aa		11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	PPP4C	P60510	307 aa		11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	TDRD3	Q9H7E2	651 aa	Known RBP	11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	USP40	Q9NVE5	1235 aa		11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	ZNF70	Q9UC06	446 aa	Predicted RBP	11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	PGAP2	Q9UHJ9	254 aa		11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	MYH2	Q9UKX2	1941 aa		11.94	□□□□□ -0.5
RACK1-233	ENST00000514455	TCRBV5S4A2T	A0A5A2	114 aa		11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	CHGB	P05060	677 aa		11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	PLCG2	P16885	1265 aa		11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	SLFNL1	Q499Z3	407 aa		11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	ANGEL2	Q5VTE6	544 aa	Known RBP	11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	CDC42EP5	Q6NZY7	148 aa		11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	ADGRA1	Q86SQ6	560 aa		11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	LDHD	Q86WU2	507 aa		11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	MIGA1	Q8NAN2	632 aa		11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	DCPS	Q96C86	337 aa	Known RBP	11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
RACK1-233	ENST00000514455	ASTN2	O75129	1339 aa	Predicted RBP	11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	MAGEB6P1	A0A0J9YX57	407 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	CLRN2	A0PK11	232 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	HIP1	O00291	1037 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	POTEI	P0CG38	1075 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	POTEJ	P0CG39	1038 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	DYNLL1	P63167	89 aa	Known RBP	11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	SPDYE2	Q495Y8	402 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	BMP2KL	Q5H9B9	411 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	CERS3	Q8IU89	383 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	APPBP2	Q92624	585 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	TMOD2	Q9NZR1	351 aa		11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	POLR2A	P24928	1970 aa	Known RBP	11.92	□□□□□ -0.5
RACK1-233	ENST00000514455	TOMM70	O94826	608 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	RHBDL3	P58872	404 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	ZMYM1	Q5SVZ6	1142 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	CHADL	Q6NUI6	762 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	CDC37L1	Q7L3B6	337 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	OSBP2	Q969R2	916 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	AIDA	Q96BJ3	306 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	PUS7L	Q9H0K6	701 aa	Known RBP	11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	VEZT	Q9HBM0	779 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	GGA3	Q9NZ52	723 aa		11.91	□□□□□ -0.5
RACK1-233	ENST00000514455	DOCK2	Q92608	1830 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	PITPNM2	Q9BZ72	1349 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	TCP10L2	B9ZVM9	353 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	TNNI2	P48788	182 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	TNFAIP1	Q13829	316 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	FKBP1C	Q5VVH2	108 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	MAP1S	Q66K74	1059 aa	Predicted RBP	11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	KRT26	Q7Z3Y9	468 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	USP48	Q86UV5	1035 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	SULF1	Q8IWU6	871 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	TEX11	Q8IYF3	940 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	RBM46	Q8TBY0	533 aa	Known RBP	11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	RIOK1	Q9BRS2	568 aa	Known RBP	11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	IDI2	Q9BXS1	227 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	HELLS	Q9NRZ9	838 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	DIAPH3	Q9NSV4	1193 aa		11.9	□□□□□ -0.5
RACK1-233	ENST00000514455	MBD4	O95243	580 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	CACNB3	P54284	484 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	NMI	Q13287	307 aa	Predicted RBP	11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	MCMDC2	Q4G0Z9	681 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	CWC27	Q6UX04	472 aa	Known RBP	11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	FAM83A	Q86UY5	434 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	SMC1B	Q8NDV3	1235 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	TGFBRAP1	Q8WUH2	860 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	FAM227B	Q96M60	508 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	STRBP	Q96SI9	672 aa	Known RBP	11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	SEC62	Q99442	399 aa	Known RBP	11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	DEFB129	Q9H1M3	183 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	ARMT1	Q9H993	441 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	SCAF8	Q9UPN6	1271 aa	Known RBP	11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	RFX7	Q2KHR2	1363 aa		11.89	□□□□□ -0.51
RACK1-233	ENST00000514455	MYH7	P12883	1935 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455		M0R2C6	588 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	ENTPD3	O75355	529 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	WDHD1	O75717	1129 aa	Predicted RBP	11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	CHML	P26374	656 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	USP5	P45974	858 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	TCP10	Q12799	353 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	NFIA	Q12857	509 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	RASA3	Q14644	834 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	LCORL	Q8N3X6	602 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	FAM151A	Q8WW52	585 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	RUFY2	Q8WXA3	655 aa		11.88	□□□□□ -0.51
RACK1-233	ENST00000514455	FAM198A	Q9UFP1	575 aa		11.88	□□□□□ -0.51

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