RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ERLIN2O94905 339 aa14.89□□□□□ -0.03
TCOF1-213ENST00000514442 EZRP15311 586 aaKnown RBP14.89□□□□□ -0.03
TCOF1-213ENST00000514442 MTIF2P46199 727 aaKnown RBP14.89□□□□□ -0.03
TCOF1-213ENST00000514442 ICE2Q659A1 982 aa14.89□□□□□ -0.03
TCOF1-213ENST00000514442 FBXO3Q9UK99 471 aa14.89□□□□□ -0.03
TCOF1-213ENST00000514442 RAD51AP2Q09MP3 1159 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 MYO6Q9UM54 1294 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 JRKLQ9Y4A0 524 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 ERVV-2B6SEH9 535 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 RPS6KB1P23443 525 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 RBM26Q5T8P6 1007 aaKnown RBP14.88□□□□□ -0.03
TCOF1-213ENST00000514442 TET3O43151 1660 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 PRAMEF22A3QJZ6 481 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 OGFOD1Q8N543 542 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 PUF60Q9UHX1 559 aaKnown RBP14.88□□□□□ -0.03
TCOF1-213ENST00000514442 BCORL1Q5H9F3 1711 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 NCOA5Q9HCD5 579 aaKnown RBP14.88□□□□□ -0.03
TCOF1-213ENST00000514442 TMEM51Q9NW97 253 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 SAMM50Q9Y512 469 aa14.88□□□□□ -0.03
TCOF1-213ENST00000514442 GPAA1O43292 621 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 DNA2P51530 1060 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 USP21Q9UK80 565 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 CTAGE9A4FU28 777 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 CCDC175P0C221 793 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 ZAP70P43403 619 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 SCLT1Q96NL6 688 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 DENND2AQ9ULE3 1009 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 SPTLC2O15270 562 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 PRDM1O75626 825 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 CDC25BP30305 580 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 ARHGEF25Q86VW2 580 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 FAM76AQ8TAV0 307 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 EHMT1Q9H9B1 1298 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 EFCAB8A8MWE9 144 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 HIBADHP31937 336 aaKnown RBP14.87□□□□□ -0.03
TCOF1-213ENST00000514442 SARNPP82979 210 aaKnown RBP14.87□□□□□ -0.03
TCOF1-213ENST00000514442 RBM28Q9NW13 759 aaKnown RBP14.87□□□□□ -0.03
TCOF1-213ENST00000514442 CLTCL1P53675 1640 aa14.87□□□□□ -0.03
TCOF1-213ENST00000514442 IGSF1Q8N6C5 1336 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 MYO1CO00159 1063 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 SPA17Q15506 151 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 BEND3Q5T5X7 828 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 NRBP1Q9UHY1 535 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 INPP5BP32019 993 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 SLFNL1Q499Z3 407 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 TCERG1LQ5VWI1 586 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 RBM17Q96I25 401 aaKnown RBP14.86□□□□□ -0.03
TCOF1-213ENST00000514442 HDAC9Q9UKV0 1011 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 AOX1Q06278 1338 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 RHOXF2BP0C7M4 288 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 TCIRG1Q13488 830 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 KBTBD3Q8NAB2 608 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 RHOXF2Q9BQY4 288 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 KDRP35968 1356 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 RTL9Q8NET4 1388 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 AMPD3Q01432 767 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 CEP57Q86XR8 500 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 ZBTB9Q96C00 473 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 DHX58Q96C10 678 aa14.86□□□□□ -0.03
TCOF1-213ENST00000514442 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.86□□□□□ -0.03
TCOF1-213ENST00000514442 SSR1P43307 286 aaKnown RBP14.85□□□□□ -0.03
TCOF1-213ENST00000514442 CCDC40Q4G0X9 1142 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 TDRD12Q587J7 1177 aaKnown RBP14.85□□□□□ -0.03
TCOF1-213ENST00000514442 CCDC178Q5BJE1 867 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 RRAGBQ5VZM2 374 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 APPBP2Q92624 585 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 MRFAP1L1Q96HT8 127 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 IQGAP3Q86VI3 1631 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 ADCY10Q96PN6 1610 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 OPA1O60313 960 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 LMOD1P29536 600 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-213ENST00000514442 ACTN2P35609 894 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 STAT6P42226 847 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 GNAQP50148 359 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 KANK3Q6NY19 840 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 CLCN6P51797 869 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 BRD3Q15059 726 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 FAM173BQ6P4H8 233 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 HSPA4P34932 840 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 INCENPQ9NQS7 918 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 MRVI1Q9Y6F6 885 aa14.85□□□□□ -0.03
TCOF1-213ENST00000514442 A0A1B0GUA9 196 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 HSF2BPO75031 334 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 CKAP4Q07065 602 aaKnown RBP14.84□□□□□ -0.03
TCOF1-213ENST00000514442 KARSQ15046 597 aaKnown RBP14.84□□□□□ -0.03
TCOF1-213ENST00000514442 SSH3Q8TE77 659 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 TRIM75PA6NK02 468 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 CTDSPL2Q05D32 466 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 KMT5BQ4FZB7 885 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 TEX11Q8IYF3 940 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 TAF4BQ92750 862 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 EAF2Q96CJ1 260 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-213ENST00000514442 TRIM47Q96LD4 638 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 DDIT3P35638 169 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 TDRD7Q8NHU6 1098 aaKnown RBP14.84□□□□□ -0.03
TCOF1-213ENST00000514442 LPIN2Q92539 896 aa14.84□□□□□ -0.03
TCOF1-213ENST00000514442 AATFQ9NY61 560 aaKnown RBP eCLIP14.84□□□□□ -0.03
TCOF1-213ENST00000514442 MYL10Q9BUA6 226 aa14.83□□□□□ -0.03
TCOF1-213ENST00000514442 EXOC1Q9NV70 894 aa14.83□□□□□ -0.03
TCOF1-213ENST00000514442 RGS12O14924 1447 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms