RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
SNHG4-207ENST00000513259 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
SNHG4-207ENST00000513259 RANBP2P49792 3224 aaKnown RBP11.28□□□□□ -0.6
SNHG4-207ENST00000513259 F6X3S4 739 aa11.27□□□□□ -0.61
SNHG4-207ENST00000513259 RIOK3O14730 519 aaKnown RBP11.27□□□□□ -0.61
SNHG4-207ENST00000513259 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
SNHG4-207ENST00000513259 DZIP1LQ8IYY4 767 aaKnown RBP11.27□□□□□ -0.61
SNHG4-207ENST00000513259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNHG4-207ENST00000513259 FAM84BQ96KN1 310 aaPredicted RBP11.27□□□□□ -0.61
SNHG4-207ENST00000513259 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.61
SNHG4-207ENST00000513259 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
SNHG4-207ENST00000513259 HIBADHP31937 336 aaKnown RBP11.26□□□□□ -0.61
SNHG4-207ENST00000513259 CRKP46108 304 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 IRX5P78411 483 aaPredicted RBP11.26□□□□□ -0.61
SNHG4-207ENST00000513259 GRIK5Q16478 980 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 CCDC57Q2TAC2 916 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 TAF7LQ5H9L4 462 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 OCEL1Q9H607 264 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 CSADQ9Y600 493 aa11.26□□□□□ -0.61
SNHG4-207ENST00000513259 SPDYE5A6NIY4 337 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 BTBD19C9JJ37 291 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 TLR2O60603 784 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 VAMP4O75379 141 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 TNNI2P48788 182 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 CACNB3P54284 484 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 LACTBP83111 547 aaPredicted RBP11.25□□□□□ -0.61
SNHG4-207ENST00000513259 CCDC27Q2M243 656 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 CCDC184Q52MB2 194 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
SNHG4-207ENST00000513259 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
SNHG4-207ENST00000513259 SNCAIPQ9Y6H5 919 aa11.25□□□□□ -0.61
SNHG4-207ENST00000513259 CETPP11597 493 aa11.24□□□□□ -0.61
SNHG4-207ENST00000513259 CTGFP29279 349 aa11.24□□□□□ -0.61
SNHG4-207ENST00000513259 UBE4AQ14139 1066 aa11.24□□□□□ -0.61
SNHG4-207ENST00000513259 KIF22Q14807 665 aa11.24□□□□□ -0.61
SNHG4-207ENST00000513259 MTFR1Q15390 333 aa11.24□□□□□ -0.61
SNHG4-207ENST00000513259 ERO1BQ86YB8 467 aa11.24□□□□□ -0.61
SNHG4-207ENST00000513259 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
SNHG4-207ENST00000513259 GRM8O00222 908 aa11.23□□□□□ -0.61
SNHG4-207ENST00000513259 IRF6O14896 467 aa11.23□□□□□ -0.61
SNHG4-207ENST00000513259 WDHD1O75717 1129 aaPredicted RBP11.23□□□□□ -0.61
SNHG4-207ENST00000513259 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
SNHG4-207ENST00000513259 DPF3Q92784 378 aa11.23□□□□□ -0.61
SNHG4-207ENST00000513259 SHISA4Q96DD7 197 aa11.23□□□□□ -0.61
SNHG4-207ENST00000513259 WRNIP1Q96S55 665 aa11.23□□□□□ -0.61
SNHG4-207ENST00000513259 IL16Q14005 1332 aa11.23□□□□□ -0.61
SNHG4-207ENST00000513259 EXOSC9Q06265 439 aaKnown RBP11.22□□□□□ -0.61
SNHG4-207ENST00000513259 PPIL2Q13356 520 aa11.22□□□□□ -0.61
SNHG4-207ENST00000513259 SNAPC2Q13487 334 aa11.22□□□□□ -0.61
SNHG4-207ENST00000513259 C17orf99Q6UX52 265 aa11.22□□□□□ -0.61
SNHG4-207ENST00000513259 FBXO33Q7Z6M2 555 aa11.22□□□□□ -0.61
SNHG4-207ENST00000513259 ZCCHC17Q9NP64 241 aaKnown RBP11.22□□□□□ -0.61
SNHG4-207ENST00000513259 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
SNHG4-207ENST00000513259 C9orf78Q9NZ63 289 aaPredicted RBP11.22□□□□□ -0.61
SNHG4-207ENST00000513259 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
SNHG4-207ENST00000513259 CPA4Q9UI42 421 aa11.22□□□□□ -0.61
SNHG4-207ENST00000513259 RIPOR2Q9Y4F9 1068 aa11.22□□□□□ -0.61
SNHG4-207ENST00000513259 GNRH1P01148 92 aa11.21□□□□□ -0.61
SNHG4-207ENST00000513259 PSMC4P43686 418 aa11.21□□□□□ -0.61
SNHG4-207ENST00000513259 PRMT2P55345 433 aa11.21□□□□□ -0.61
SNHG4-207ENST00000513259 HDLBPQ00341 1268 aaKnown RBP11.21□□□□□ -0.61
SNHG4-207ENST00000513259 TEKT1Q969V4 418 aa11.21□□□□□ -0.61
SNHG4-207ENST00000513259 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.61
SNHG4-207ENST00000513259 KAZALD1Q96I82 304 aa11.21□□□□□ -0.61
SNHG4-207ENST00000513259 TRIM47Q96LD4 638 aa11.21□□□□□ -0.61
SNHG4-207ENST00000513259 SALL2Q9Y467 1007 aaPredicted RBP11.21□□□□□ -0.61
SNHG4-207ENST00000513259 FRAT2O75474 233 aaPredicted RBP11.2□□□□□ -0.62
SNHG4-207ENST00000513259 OSBPP22059 807 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 INPP5BP32019 993 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 APOBEC3HQ6NTF7 200 aaKnown RBP11.2□□□□□ -0.62
SNHG4-207ENST00000513259 MIGA2Q7L4E1 593 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 FAM83AQ86UY5 434 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 VPS37DQ86XT2 251 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.2□□□□□ -0.62
SNHG4-207ENST00000513259 SUCLG2Q96I99 432 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 ZDHHC15Q96MV8 337 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 SRRDQ9UH36 339 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 A0A0C4DFX4 3053 aa11.2□□□□□ -0.62
SNHG4-207ENST00000513259 MROH5Q6ZUA9 1318 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 PDHXO00330 501 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
SNHG4-207ENST00000513259 CCL5P13501 91 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 GRK4P32298 578 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 PPATQ06203 517 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 LRRC24Q50LG9 513 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 SLC4A10Q6U841 1118 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 UBE2Q1Q7Z7E8 422 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 ANKRD23Q86SG2 305 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 RAET1EQ8TD07 263 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 TBC1D22AQ8WUA7 517 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 ZNF341Q9BYN7 854 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 AK9Q5TCS8 1911 aa11.19□□□□□ -0.62
SNHG4-207ENST00000513259 COL6A3P12111 3177 aa11.18□□□□□ -0.62
SNHG4-207ENST00000513259 ADGRA2Q96PE1 1338 aa11.18□□□□□ -0.62
SNHG4-207ENST00000513259 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 776.1 ms