RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZSCAN29Q8IWY8 852 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 SEPT12Q8IYM1 358 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 EMILIN3Q9NT22 766 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 DCTN4Q9UJW0 460 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 WDR17Q8IZU2 1322 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 RGPD5Q99666 1765 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 FLT4P35916 1363 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 NR1I2O75469 434 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 FGRP09769 529 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 CTHP32929 405 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 PPM1FP49593 454 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 CHMP4BP1P59074 171 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 FRS2Q8WU20 508 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 TTC14Q96N46 770 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 LUZP4Q9P127 313 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 ZNF652Q9Y2D9 606 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 SPATA31A1Q5TZJ5 1347 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 SPATA31A5Q5VU36 1347 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 SPATA31A7Q8IWB4 1347 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 NSD2O96028 1365 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 SENP3-EIF4A1A0A087X0R7 540 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 TRIM6-TRIM34B2RNG4 842 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 DIAPH1O60610 1272 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 HMOX1P09601 288 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 ADD2P35612 726 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 TSPAN7P41732 249 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 TTF1Q15361 905 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 ALFQ53S48 1182 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 CCDC73Q6ZRK6 1079 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 CATIPQ7Z7H3 387 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 ZNF710Q8N1W2 664 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 TCP11L2Q8N4U5 519 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 FLCNQ8NFG4 579 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 JARID2Q92833 1246 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 TBC1D31Q96DN5 1066 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 VMP1Q96GC9 406 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 RIC8AQ9NPQ8 531 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 ATRNO75882 1429 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 CCDC85CA6NKD9 419 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 ATP9BO43861 1147 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 PRMT3O60678 531 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 LILRB3O75022 631 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 OAS2P29728 719 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 PPP2R1AP30153 589 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 ZNF132P52740 706 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 EIF4A2Q14240 407 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 DNTTIP2Q5QJE6 756 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 STK11IPQ8N1F8 1099 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 ANKRD42Q8N9B4 389 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 PAWRQ96IZ0 340 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 METTL5Q9NRN9 209 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 VTI1BQ9UEU0 232 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 RGS12O14924 1447 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 CRB1P82279 1406 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 SMG6Q86US8 1419 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 PEAK1Q9H792 1746 aa5.93□□□□□ -1.46
TRAPPC11-208ENST00000511955 LMO7Q8WWI1 1683 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 SHTN1A0MZ66 631 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 COQ9O75208 318 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 CD151P48509 253 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 NUCB1Q02818 461 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 TRIM29Q14134 588 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 CPXCR1Q8N123 301 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 MYO1HQ8N1T3 1032 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 DDX54Q8TDD1 881 aaKnown RBP5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 SKA1Q96BD8 255 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 MPP4Q96JB8 637 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 FAM210AQ96ND0 272 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 TMX1Q9H3N1 280 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 FAM217BQ9NTX9 383 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 MAFFQ9ULX9 164 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 GLI3P10071 1580 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 MAP2P11137 1827 aaKnown RBP5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 NBPF7P0C2Y1 421 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 CKAP2LQ8IYA6 745 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 CLASRPQ8N2M8 674 aaKnown RBP5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 PPHLN1Q8NEY8 458 aaKnown RBP5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 PHF12Q96QT6 1004 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 EYA1Q99502 592 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 XPO4Q9C0E2 1151 aaKnown RBP5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 SPG7Q9UQ90 795 aa5.92□□□□□ -1.46
TRAPPC11-208ENST00000511955 INSRP06213 1382 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 NRAPQ86VF7 1730 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 NWD2Q9ULI1 1742 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 COL18A1P39060 1754 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 BLMP54132 1417 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 ORC4O43929 436 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 SERINC3Q13530 473 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 DDB1Q16531 1140 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 QPCTQ16769 361 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 CRTC2Q53ET0 693 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 FAM83BQ5T0W9 1011 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 JAKMIP3Q5VZ66 844 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 SULT6B1Q6IMI4 303 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 GAS2L2Q8NHY3 880 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 SH3TC2Q8TF17 1288 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 RAPGEF4Q8WZA2 1011 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms