RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 GATAD2BQ8WXI9 593 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 HOOK2Q96ED9 719 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 TRERF1Q96PN7 1200 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 TARS2Q9BW92 718 aaKnown RBP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 CCDC8Q9H0W5 538 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 CBX8Q9HC52 389 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 ABCB6Q9NP58 842 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZNF180Q9UJW8 692 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 FBXO9Q9UK97 447 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZNRF3Q9ULT6 936 aa4.63□□□□□ -1.67
HMGB1P22-201ENST00000505315 FAM86C2PA6NEL3 165 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 GRIN3BO60391 1043 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 HSP90AA1P07900 732 aaKnown RBP4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 NR3C2P08235 984 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 CCNFP41002 786 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 PPM1FP49593 454 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 NEK4P51957 841 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 CASP7P55210 303 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 RAPGEF1Q13905 1077 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 GRAMD1BQ3KR37 738 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 C4orf17Q53FE4 359 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 AKAP4Q5JQC9 854 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 KANK3Q6NY19 840 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 CLEC4GQ6UXB4 293 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 REC114Q7Z4M0 266 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 RNF180Q86T96 592 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 TTC6Q86TZ1 520 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 REXO1Q8N1G1 1221 aaKnown RBP4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZBTB38Q8NAP3 1195 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 ASAP3Q8TDY4 903 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 KLRG1Q96E93 195 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 NECAB3Q96P71 396 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 PNMA5Q96PV4 448 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 OSMRQ99650 979 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 YIPF4Q9BSR8 244 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 RUSC1Q9BVN2 902 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZHX3Q9H4I2 956 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 ATG3Q9NT62 314 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 MAPRE3Q9UPY8 281 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 DAAM1Q9Y4D1 1078 aa4.62□□□□□ -1.67
HMGB1P22-201ENST00000505315 CCDC163A0A0D9SF12 145 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 A0A1W2PQH9 124 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 GSG1L2A8MUP6 293 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 HRO43593 1189 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 PAGE1O75459 146 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 SASH3O75995 380 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 CD2BP2O95400 341 aaKnown RBP4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 RPS26P62854 115 aaKnown RBP4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 PPP2R3AQ06190 1150 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 POU5F1BQ06416 359 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 PICALMQ13492 652 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 PIN1Q13526 163 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 SPRED3Q2MJR0 410 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZC3H12BQ5HYM0 836 aaKnown RBP4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 PEAR1Q5VY43 1037 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 VHLLQ6RSH7 139 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 KRBA2Q6ZNG9 492 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 STRA8Q7Z7C7 330 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 CCDC84Q86UT8 332 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZNF295-AS1Q8N0V1 137 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 JMYQ8N9B5 988 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 SLC7A3Q8WY07 619 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 PPP1R14AQ96A00 147 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 MARVELD3Q96A59 401 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 E2F7Q96AV8 911 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 KIF2CQ99661 725 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 LRRC3Q9BY71 257 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 ASPSCR1Q9BZE9 553 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 AVENQ9NQS1 362 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 SEC31BQ9NQW1 1179 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 DZANK1Q9NVP4 752 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZDHHC3Q9NYG2 299 aa4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P22-201ENST00000505315 E2F8A0AVK6 867 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 ENC1O14682 589 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 TRPA1O75762 1119 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 CCND1P24385 295 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 TCIRG1Q13488 830 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 MTMR1Q13613 665 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 MLECQ14165 292 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 NCAPHQ15003 741 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 L1TD1Q5T7N2 865 aaKnown RBP4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 ANO1Q5XXA6 986 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 IL31Q6EBC2 164 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 MRM1Q6IN84 353 aaKnown RBP4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 LRRTM3Q86VH5 581 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 AMOTL1Q8IY63 956 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZSCAN1Q8NBB4 408 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 MYRIPQ8NFW9 859 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZNF669Q96BR6 464 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 TCF12Q99081 682 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 SENP7Q9BQF6 1050 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 ZKSCAN3Q9BRR0 538 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 FBRSQ9HAH7 460 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 LRP2BPQ9P2M1 347 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 SWAP70Q9UH65 585 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 IP6K2Q9UHH9 426 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 USP25Q9UHP3 1055 aa4.6□□□□□ -1.67
HMGB1P22-201ENST00000505315 SALL4Q9UJQ4 1053 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms