RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 AXDND1Q5T1B0 1012 aaPredicted RBP8.73□□□□□ -1.01
NEDD9-208ENST00000504387 ICE2Q659A1 982 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 MRFAP1Q9Y605 127 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 KIF20BQ96Q89 1820 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 ZNF609O15014 1411 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 SRGAP2O75044 1071 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 ALDH1L1O75891 902 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 NAA16Q6N069 864 aaPredicted RBP8.73□□□□□ -1.01
NEDD9-208ENST00000504387 NOA1Q8NC60 698 aaKnown RBP8.73□□□□□ -1.01
NEDD9-208ENST00000504387 SMARCC2Q8TAQ2 1214 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 MAPK8IP1Q9UQF2 711 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 GIGYF1O75420 1035 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-208ENST00000504387 GCP02774 474 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 TNNI3KQ59H18 835 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 PI16Q6UXB8 463 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 VSTM4Q8IW00 320 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 TRIM10Q9UDY6 481 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 FPGT-TNNI3KV9GXZ4 949 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 CDC42BPGQ6DT37 1551 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 ARHGAP6O43182 974 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 IGKV5-2P06315 115 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 HSPD1P10809 573 aaKnown RBP8.72□□□□□ -1.01
NEDD9-208ENST00000504387 LMBR1LQ6UX01 489 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 SLC35F6Q8N357 371 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 IP6K1Q92551 441 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 SECISBP2LQ93073 1101 aaKnown RBP8.72□□□□□ -1.01
NEDD9-208ENST00000504387 RTEL1Q9NZ71 1219 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 HDAC6Q9UBN7 1215 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 SAMM50Q9Y512 469 aa8.72□□□□□ -1.01
NEDD9-208ENST00000504387 A0A1B0GUL7 405 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 POLR2DO15514 142 aaKnown RBP8.71□□□□□ -1.01
NEDD9-208ENST00000504387 PRC1O43663 620 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 BMP6P22004 513 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 SLC20A2Q08357 652 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 SF3A3Q12874 501 aaKnown RBP eCLIP8.71□□□□□ -1.014e-6■■□□□ 12.2
NEDD9-208ENST00000504387 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.01
NEDD9-208ENST00000504387 AKAP4Q5JQC9 854 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 SHC4Q6S5L8 630 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 KCNG4Q8TDN1 519 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 FAM212AQ96EL1 285 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 ANKZF1Q9H8Y5 726 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 SENP2Q9HC62 589 aa8.71□□□□□ -1.01
NEDD9-208ENST00000504387 LRRIQ3A6PVS8 624 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-208ENST00000504387 CCP110O43303 1012 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 ECM2O94769 699 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-208ENST00000504387 MATR3P43243 847 aaKnown RBP eCLIP8.71□□□□□ -1.024e-6■□□□□ 8.9
NEDD9-208ENST00000504387 MNAT1P51948 309 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 CASP8Q14790 479 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 MUM1L1Q5H9M0 696 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 FBXW10Q5XX13 1052 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 RAD9BQ6WBX8 426 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 NFXL1Q6ZNB6 911 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 ANKRD13DQ6ZTN6 518 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 TC2NQ8N9U0 490 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 NKX2-3Q8TAU0 364 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 EXOC4Q96A65 974 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 MPHOSPH8Q99549 860 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 ALG1Q9BT22 464 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 DEF6Q9H4E7 631 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 GUCA1BQ9UMX6 200 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 HDAC5Q9UQL6 1122 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 SRCAPQ6ZRS2 3230 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 MED23Q9ULK4 1368 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 hCG_1642624A0A1W2PR95 340 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 CBFA2T2O43439 604 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 KIF5CO60282 957 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 TPM1P09493 284 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 CCT5P48643 541 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 LRRC31Q6UY01 552 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 USP49Q70CQ1 688 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 HDXQ7Z353 690 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 METTL16Q86W50 562 aaKnown RBP8.71□□□□□ -1.02
NEDD9-208ENST00000504387 LINS1Q8NG48 757 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 RABGGTAQ92696 567 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 PSMB7Q99436 277 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 ATG3Q9NT62 314 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 KCNJ14Q9UNX9 436 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 AXIN2Q9Y2T1 843 aa8.71□□□□□ -1.02
NEDD9-208ENST00000504387 CUTAO60888 179 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 RBL2Q08999 1139 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 RRP12Q5JTH9 1297 aaKnown RBP8.7□□□□□ -1.02
NEDD9-208ENST00000504387 BEND6Q5SZJ8 279 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-208ENST00000504387 RALYLQ86SE5 291 aaKnown RBP8.7□□□□□ -1.02
NEDD9-208ENST00000504387 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 VPS37DQ86XT2 251 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 TMEM139Q8IV31 216 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 ZNF496Q96IT1 587 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-208ENST00000504387 SLF1Q9BQI6 1058 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 M0R2C6 588 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 DNA2P51530 1060 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 CABP4P57796 275 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 SPECC1LQ69YQ0 1117 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 RSRC2Q7L4I2 434 aaKnown RBP8.7□□□□□ -1.02
NEDD9-208ENST00000504387 ZKSCAN3Q9BRR0 538 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 FAM107BQ9H098 131 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 PAG1Q9NWQ8 432 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 SERTAD1Q9UHV2 236 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 KCNH3Q9ULD8 1083 aa8.7□□□□□ -1.02
NEDD9-208ENST00000504387 NEDD4P46934 1319 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms