RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 POLD1P28340 1107 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 CERS3Q8IU89 383 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 TMEM87BQ96K49 555 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 TMEM94Q12767 1356 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 FSD2A1L4K1 749 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 CCDC42Q96M95 316 aa18.29■□□□□ 0.52
HMGXB3-202ENST00000503427 NEURL1BA8MQ27 555 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 SLC27A2O14975 620 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 SAMM50Q9Y512 469 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 IQUBQ8NA54 791 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 TET3O43151 1660 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 MROH5Q6ZUA9 1318 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 CCDC155Q8N6L0 562 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 PLEKHF1Q96S99 279 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 PRDM15P57071 1507 aaPredicted RBP18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 GNA11P29992 359 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 JDP2Q8WYK2 163 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 DDX12PQ92771 950 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 MMRN2Q9H8L6 949 aa18.28■□□□□ 0.52
HMGXB3-202ENST00000503427 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
HMGXB3-202ENST00000503427 CCDC174Q6PII3 467 aa18.27■□□□□ 0.52
HMGXB3-202ENST00000503427 A0A1B0GVL5 298 aa18.27■□□□□ 0.52
HMGXB3-202ENST00000503427 PRPHP41219 470 aa18.27■□□□□ 0.52
HMGXB3-202ENST00000503427 CNGA4Q8IV77 575 aa18.27■□□□□ 0.52
HMGXB3-202ENST00000503427 DRC1Q96MC2 740 aa18.27■□□□□ 0.52
HMGXB3-202ENST00000503427 KDRP35968 1356 aa18.27■□□□□ 0.52
HMGXB3-202ENST00000503427 UBE4AQ14139 1066 aa18.27■□□□□ 0.51
HMGXB3-202ENST00000503427 USP6P35125 1406 aa18.27■□□□□ 0.51
HMGXB3-202ENST00000503427 UBXN1Q04323 297 aa18.27■□□□□ 0.51
HMGXB3-202ENST00000503427 CLSTN2Q9H4D0 955 aa18.27■□□□□ 0.51
HMGXB3-202ENST00000503427 STX17P56962 302 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 ZNF594Q96JF6 807 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 SSH3Q8TE77 659 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 ABCC3O15438 1527 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 ROBO2Q9HCK4 1378 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 USP37Q86T82 979 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 LMBR1Q8WVP7 490 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 OGFRQ9NZT2 677 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 UFL1O94874 794 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 KRT79Q5XKE5 535 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 WDR66Q8TBY9 1149 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 LZTFL1Q9NQ48 299 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
HMGXB3-202ENST00000503427 ARHGAP31Q2M1Z3 1444 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 RIMBP2O15034 1052 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 KARSQ15046 597 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 ZNF569Q5MCW4 686 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 SMARCC2Q8TAQ2 1214 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 RRAGDQ9NQL2 400 aaPredicted RBP18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 LUC7L2Q9Y383 392 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 RILPL1Q5EBL4 403 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 ERO1AQ96HE7 468 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 BAG1Q99933 345 aaPredicted RBP18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 ADCY10Q96PN6 1610 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 GGA1Q9UJY5 639 aa18.25■□□□□ 0.51
HMGXB3-202ENST00000503427 TEX11Q8IYF3 940 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 GUCA1BQ9UMX6 200 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 GPAA1O43292 621 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 KRT13P13646 458 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 IBSPP21815 317 aaPredicted RBP18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 RASAL2Q9UJF2 1139 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 MAST3O60307 1309 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 ATP5JP18859 108 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 DTHD1Q6ZMT9 781 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 LMBRD1Q9NUN5 540 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 RSPH14Q9UHP6 348 aa18.24■□□□□ 0.51
HMGXB3-202ENST00000503427 CAPN2P17655 700 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 USP21Q9UK80 565 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 AKR1B15C9JRZ8 316 aaPredicted RBP18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 VEZTQ9HBM0 779 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 ANO1Q5XXA6 986 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 SPDYE3A6NKU9 549 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 CCDC129Q6ZRS4 1044 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 NEK11Q8NG66 645 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 PLA2R1Q13018 1463 aa18.23■□□□□ 0.51
HMGXB3-202ENST00000503427 RXRAP19793 462 aa18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 MCM7P33993 719 aa18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 TRMT2AQ8IZ69 625 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 FAM227BQ96M60 508 aa18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 IQGAP3Q86VI3 1631 aa18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 KCNQ3O43525 872 aa18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 HSPA4P34932 840 aa18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 PUF60Q9UHX1 559 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 ACTN2P35609 894 aa18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 TERF1P54274 439 aa18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 TRMT1LQ7Z2T5 733 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 NSRP1Q9H0G5 558 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-202ENST00000503427 B4E1Z4 1266 aa18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 PPP1R2P41236 205 aa18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 LEO1Q8WVC0 666 aaPredicted RBP18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 NAP1L4Q99733 375 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 ARMT1Q9H993 441 aa18.21■□□□□ 0.51
HMGXB3-202ENST00000503427 PARP1P09874 1014 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms