RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 SPA17Q15506 151 aa15.13■□□□□ 0.01
SPCS3-201ENST00000503362 SEC63Q9UGP8 760 aaKnown RBP15.13■□□□□ 0.01
SPCS3-201ENST00000503362 ZNF215Q9UL58 517 aaPredicted RBP15.13■□□□□ 0.01
SPCS3-201ENST00000503362 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 USP32Q8NFA0 1604 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 CUTAO60888 179 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
SPCS3-201ENST00000503362 CTAGE1Q96RT6 745 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 GPHNQ9NQX3 736 aaPredicted RBP15.12■□□□□ 0.01
SPCS3-201ENST00000503362 BMP2KQ9NSY1 1161 aaPredicted RBP15.12■□□□□ 0.01
SPCS3-201ENST00000503362 NFE2L3Q9Y4A8 694 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 PI16Q6UXB8 463 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 PGBD1Q96JS3 809 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 TRIM47Q96LD4 638 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 CRNKL1Q9BZJ0 848 aaKnown RBP15.12■□□□□ 0.01
SPCS3-201ENST00000503362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.015e-6■■□□□ 13.2
SPCS3-201ENST00000503362 NRKQ7Z2Y5 1582 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 ZPR1O75312 459 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 PRDM1O75626 825 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 FKBP15Q5T1M5 1219 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 OSBP2Q969R2 916 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 FRMPD1Q5SYB0 1578 aa15.12■□□□□ 0.01
SPCS3-201ENST00000503362 MCM6Q14566 821 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 TAF3Q5VWG9 929 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 CRACR2AQ9BSW2 395 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 TCP11L1Q9NUJ3 509 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 SHPRHQ149N8 1683 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 CARMIL3Q8ND23 1372 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 KRT2P35908 639 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 ZNF174Q15697 407 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 VWA3AA6NCI4 1184 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 M0R2C6 588 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 PDE8AO60658 829 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 DPCR1Q3MIW9 517 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 TRMT44Q8IYL2 757 aaKnown RBP15.11■□□□□ 0.01
SPCS3-201ENST00000503362 LUC7LQ9NQ29 371 aaKnown RBP15.11■□□□□ 0.01
SPCS3-201ENST00000503362 RTEL1Q9NZ71 1219 aa15.11■□□□□ 0.01
SPCS3-201ENST00000503362 DEXIO95424 95 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 IDEP14735 1019 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 STAT6P42226 847 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 CMTR1Q8N1G2 835 aaKnown RBP15.1■□□□□ 0.01
SPCS3-201ENST00000503362 CLIC6Q96NY7 704 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 CARD6Q9BX69 1037 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 ZNF287Q9HBT7 754 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 CALCOCO1Q9P1Z2 691 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 ANKARQ7Z5J8 1434 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 SH3TC1Q8TE82 1336 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 EVCP57679 992 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 IQCEQ6IPM2 695 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 LPIN2Q92539 896 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 PUF60Q9UHX1 559 aaKnown RBP15.1■□□□□ 0.01
SPCS3-201ENST00000503362 CMA1P23946 247 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 MCM7P33993 719 aa15.1■□□□□ 0.01
SPCS3-201ENST00000503362 PYM1Q9BRP8 204 aaKnown RBP15.1■□□□□ 0.01
SPCS3-201ENST00000503362 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.1■□□□□ 0.01
SPCS3-201ENST00000503362 V9GY48 417 aaPredicted RBP15.1■□□□□ 0.01
SPCS3-201ENST00000503362 DNA2P51530 1060 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 SPAG1Q07617 926 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 GPR108Q9NPR9 543 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 LMAN1P49257 510 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 SPATA5Q8NB90 893 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 BTG4Q9NY30 223 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 PDE6AP16499 860 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 TRIM21P19474 475 aaKnown RBP15.09■□□□□ 0.01
SPCS3-201ENST00000503362 ENOX2Q16206 610 aaKnown RBP15.09■□□□□ 0.01
SPCS3-201ENST00000503362 CACNA2D4Q7Z3S7 1137 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 JAG2Q9Y219 1238 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 RTL9Q8NET4 1388 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 CHGBP05060 677 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 CCT6AP40227 531 aaKnown RBP15.09■□□□□ 0.01
SPCS3-201ENST00000503362 ZNF569Q5MCW4 686 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 RMND1Q9NWS8 449 aa15.09■□□□□ 0.01
SPCS3-201ENST00000503362 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
SPCS3-201ENST00000503362 A0A1W2PQ27 194 aa15.08■□□□□ 0.01
SPCS3-201ENST00000503362 A0A1W2PQ64 194 aa15.08■□□□□ 0.01
SPCS3-201ENST00000503362 A0A1W2PQD8 194 aa15.08■□□□□ 0.01
SPCS3-201ENST00000503362 ARID5BQ14865 1188 aa15.08■□□□□ 0.01
SPCS3-201ENST00000503362 POSTNQ15063 836 aa15.08■□□□□ 0.01
SPCS3-201ENST00000503362 SETQ01105 290 aaPredicted RBP15.08■□□□□ 0
SPCS3-201ENST00000503362 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
SPCS3-201ENST00000503362 LINC00301Q8NCQ3 95 aa15.08■□□□□ 0
SPCS3-201ENST00000503362 GJB4Q9NTQ9 266 aa15.08■□□□□ 0
SPCS3-201ENST00000503362 TCEAL9Q9UHQ7 104 aa15.08■□□□□ 0
SPCS3-201ENST00000503362 AKR1B15C9JRZ8 316 aaPredicted RBP15.08■□□□□ 0
SPCS3-201ENST00000503362 ERCC6LQ2NKX8 1250 aa15.08■□□□□ 0
SPCS3-201ENST00000503362 IGSF22Q8N9C0 903 aa15.08■□□□□ 0
SPCS3-201ENST00000503362 IQUBQ8NA54 791 aa15.08■□□□□ 0
SPCS3-201ENST00000503362 GOLGA1Q92805 767 aa15.08■□□□□ 0
SPCS3-201ENST00000503362 CCDC43Q96MW1 224 aaKnown RBP15.08■□□□□ 0
SPCS3-201ENST00000503362 CTAGE15A4D2H0 777 aa15.07■□□□□ 0
SPCS3-201ENST00000503362 BTBD18B2RXH4 712 aa15.07■□□□□ 0
SPCS3-201ENST00000503362 POTEB2H3BUK9 544 aa15.07■□□□□ 0
SPCS3-201ENST00000503362 CYP27B1O15528 508 aa15.07■□□□□ 0
SPCS3-201ENST00000503362 CTAGE8P0CG41 777 aa15.07■□□□□ 0
SPCS3-201ENST00000503362 ZNF827Q17R98 1081 aa15.07■□□□□ 0
SPCS3-201ENST00000503362 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
SPCS3-201ENST00000503362 CTAGE6Q86UF2 777 aa15.07■□□□□ 0
SPCS3-201ENST00000503362 CTAGE4Q8IX94 777 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms