RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 CREBRFQ8IUR6 639 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 ZBTB38Q8NAP3 1195 aaPredicted RBP5.98□□□□□ -1.45
CLDND1-208ENST00000503004 NEK11Q8NG66 645 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 NKX2-3Q8TAU0 364 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 ERCC4Q92889 916 aaPredicted RBP5.98□□□□□ -1.45
CLDND1-208ENST00000503004 USP28Q96RU2 1077 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 MED4Q9NPJ6 270 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 IGSF5Q9NSI5 407 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 STARD3NLO95772 234 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 PCCAP05165 728 aaPredicted RBP5.98□□□□□ -1.45
CLDND1-208ENST00000503004 ATP2B1P20020 1258 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 ADD1P35611 737 aaKnown RBP5.98□□□□□ -1.45
CLDND1-208ENST00000503004 GSCP56915 257 aaPredicted RBP5.98□□□□□ -1.45
CLDND1-208ENST00000503004 GIGYF2Q6Y7W6 1299 aaKnown RBP5.98□□□□□ -1.45
CLDND1-208ENST00000503004 HELBQ8NG08 1087 aaPredicted RBP5.98□□□□□ -1.45
CLDND1-208ENST00000503004 TTLL11Q8NHH1 800 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 FAM200AQ8TCP9 573 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 AGXT2Q9BYV1 514 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 DNAJC25Q9H1X3 360 aa5.98□□□□□ -1.45
CLDND1-208ENST00000503004 ZBTB12Q9Y330 459 aaPredicted RBP5.98□□□□□ -1.45
CLDND1-208ENST00000503004 MAP3K15Q6ZN16 1313 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 GPAA1O43292 621 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 KIF1CO43896 1103 aaKnown RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 CSF1RP07333 972 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 FDPSP14324 419 aaKnown RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 RBM6P78332 1123 aaKnown RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 E2F4Q16254 413 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 NBPF9Q3BBW0 867 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 PACS2Q86VP3 889 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 NLRP10Q86W26 655 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 FAM117AQ9C073 453 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 PRDM16Q9HAZ2 1276 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 CNNM1Q9NRU3 951 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 TRMT112Q9UI30 125 aaKnown RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 AKAP2Q9Y2D5 859 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 RIPOR2Q9Y4F9 1068 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 SHANK3Q9BYB0 1731 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 TOGARAM1Q9Y4F4 1720 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 TTC36A6NLP5 189 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 IRS4O14654 1257 aaPredicted RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 IDH1O75874 414 aaKnown RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 POLR3DP05423 398 aaPredicted RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 RXRAP19793 462 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 TRIM28Q13263 835 aaKnown RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 BIRC2Q13490 618 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 IMMTQ16891 758 aaKnown RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 KMT5BQ4FZB7 885 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 SLC9C2Q5TAH2 1124 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 ILDR1Q86SU0 546 aaPredicted RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 ZNF526Q8TF50 670 aaPredicted RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 KCNF1Q9H3M0 494 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 ZSCAN16Q9H4T2 348 aaPredicted RBP5.97□□□□□ -1.45
CLDND1-208ENST00000503004 CBX8Q9HC52 389 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 CFAP45Q9UL16 551 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 LAMA4Q16363 1823 aa5.97□□□□□ -1.45
CLDND1-208ENST00000503004 CARMIL3Q8ND23 1372 aa5.96□□□□□ -1.45
CLDND1-208ENST00000503004 SALL1Q9NSC2 1324 aa5.96□□□□□ -1.45
CLDND1-208ENST00000503004 KLF18A0A0U1RQI7 1052 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 PRC1O43663 620 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 CYP19A1P11511 503 aaPredicted RBP5.96□□□□□ -1.46
CLDND1-208ENST00000503004 PHKA1P46020 1223 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 ZNF165P49910 485 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 ANTXR2P58335 489 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 APPBP2Q92624 585 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 LLPHQ9BRT6 129 aaKnown RBP5.96□□□□□ -1.46
CLDND1-208ENST00000503004 GOLPH3LQ9H4A5 285 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 CLSTN2Q9H4D0 955 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 RYDENQ9NUL5 291 aaKnown RBP5.96□□□□□ -1.46
CLDND1-208ENST00000503004 DDX19AQ9NUU7 478 aaKnown RBP5.96□□□□□ -1.46
CLDND1-208ENST00000503004 EP400Q96L91 3159 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 RIC1Q4ADV7 1423 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 UBN2Q6ZU65 1347 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 GOLGA8BA8MQT2 603 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 ZNF213O14771 459 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 ME1P48163 572 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 CTSWP56202 376 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 INHBEP58166 350 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 BMS1Q14692 1282 aaKnown RBP5.96□□□□□ -1.46
CLDND1-208ENST00000503004 KRBA2Q6ZNG9 492 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 CCAR1Q8IX12 1150 aaKnown RBP5.96□□□□□ -1.46
CLDND1-208ENST00000503004 KIAA1524Q8TCG1 905 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 CCDC97Q96F63 343 aaPredicted RBP5.96□□□□□ -1.46
CLDND1-208ENST00000503004 ZNF274Q96GC6 653 aaPredicted RBP5.96□□□□□ -1.46
CLDND1-208ENST00000503004 INCENPQ9NQS7 918 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 NRBP1Q9UHY1 535 aa5.96□□□□□ -1.46
CLDND1-208ENST00000503004 ANKRD18BA2A2Z9 1011 aa5.95□□□□□ -1.46
CLDND1-208ENST00000503004 PDE8BO95263 885 aa5.95□□□□□ -1.46
CLDND1-208ENST00000503004 ZFYP08048 801 aaPredicted RBP5.95□□□□□ -1.46
CLDND1-208ENST00000503004 PDE4DQ08499 809 aa5.95□□□□□ -1.46
CLDND1-208ENST00000503004 LRMPQ12912 555 aa5.95□□□□□ -1.46
CLDND1-208ENST00000503004 LRCH2Q5VUJ6 765 aa5.95□□□□□ -1.46
CLDND1-208ENST00000503004 CCDC102BQ68D86 513 aa5.95□□□□□ -1.46
CLDND1-208ENST00000503004 NAA16Q6N069 864 aaPredicted RBP5.95□□□□□ -1.46
CLDND1-208ENST00000503004 RBM43Q6ZSC3 357 aaKnown RBP5.95□□□□□ -1.46
CLDND1-208ENST00000503004 RALYLQ86SE5 291 aaKnown RBP5.95□□□□□ -1.46
CLDND1-208ENST00000503004 CCDC144CPQ8IYA2 1237 aa5.95□□□□□ -1.46
CLDND1-208ENST00000503004 MB21D2Q8IYB1 491 aaPredicted RBP5.95□□□□□ -1.46
CLDND1-208ENST00000503004 VGLL2Q8N8G2 317 aa5.95□□□□□ -1.46
CLDND1-208ENST00000503004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.95□□□□□ -1.46
CLDND1-208ENST00000503004 PLA2G12BQ9BX93 195 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms