RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 U2AF1L4Q8WU68 220 aaKnown RBP19.8■□□□□ 0.76
HDAC6-236ENST00000498808 ZDHHC15Q96MV8 337 aa19.8■□□□□ 0.76
HDAC6-236ENST00000498808 FARP2O94887 1054 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-236ENST00000498808 PRKCZQ05513 592 aa19.79■□□□□ 0.76
HDAC6-236ENST00000498808 FKBP1CQ5VVH2 108 aa19.79■□□□□ 0.76
HDAC6-236ENST00000498808 DCAF15Q66K64 600 aa19.79■□□□□ 0.76
HDAC6-236ENST00000498808 APOBEC3HQ6NTF7 200 aaKnown RBP19.79■□□□□ 0.76
HDAC6-236ENST00000498808 MIGA2Q7L4E1 593 aa19.79■□□□□ 0.76
HDAC6-236ENST00000498808 HOOK2Q96ED9 719 aa19.79■□□□□ 0.76
HDAC6-236ENST00000498808 ZNF341Q9BYN7 854 aa19.79■□□□□ 0.76
HDAC6-236ENST00000498808 TMOD2Q9NZR1 351 aa19.79■□□□□ 0.76
HDAC6-236ENST00000498808 KCNH4Q9UQ05 1017 aa19.79■□□□□ 0.76
HDAC6-236ENST00000498808 MGAMO43451 1857 aa19.78■□□□□ 0.76
HDAC6-236ENST00000498808 UBXN2AP68543 259 aa19.78■□□□□ 0.76
HDAC6-236ENST00000498808 TBC1D22AQ8WUA7 517 aa19.78■□□□□ 0.76
HDAC6-236ENST00000498808 BIN2Q9UBW5 565 aaPredicted RBP19.78■□□□□ 0.76
HDAC6-236ENST00000498808 IL16Q14005 1332 aa19.77■□□□□ 0.76
HDAC6-236ENST00000498808 A0A1W2PPC1 479 aa19.77■□□□□ 0.76
HDAC6-236ENST00000498808 VAMP4O75379 141 aa19.77■□□□□ 0.76
HDAC6-236ENST00000498808 BCRP11274 1271 aa19.77■□□□□ 0.76
HDAC6-236ENST00000498808 LRCH3Q96II8 777 aa19.77■□□□□ 0.76
HDAC6-236ENST00000498808 MRIQ9BWK5 157 aa19.77■□□□□ 0.76
HDAC6-236ENST00000498808 UNC93B1Q9H1C4 597 aa19.77■□□□□ 0.76
HDAC6-236ENST00000498808 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
HDAC6-236ENST00000498808 VPS37DQ86XT2 251 aa19.76■□□□□ 0.75
HDAC6-236ENST00000498808 KAZALD1Q96I82 304 aa19.76■□□□□ 0.75
HDAC6-236ENST00000498808 GABRQQ9UN88 632 aa19.76■□□□□ 0.75
HDAC6-236ENST00000498808 CUL9Q8IWT3 2517 aa19.75■□□□□ 0.75
HDAC6-236ENST00000498808 SGPL1O95470 568 aa19.75■□□□□ 0.75
HDAC6-236ENST00000498808 SLAIN1Q8ND83 568 aa19.75■□□□□ 0.75
HDAC6-236ENST00000498808 ZNF112Q9UJU3 913 aa19.75■□□□□ 0.75
HDAC6-236ENST00000498808 MROH5Q6ZUA9 1318 aa19.75■□□□□ 0.75
HDAC6-236ENST00000498808 ALPK3Q96L96 1907 aa19.74■□□□□ 0.75
HDAC6-236ENST00000498808 FRAT2O75474 233 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-236ENST00000498808 CYP2C8P10632 490 aa19.74■□□□□ 0.75
HDAC6-236ENST00000498808 FCGRTP55899 365 aa19.74■□□□□ 0.75
HDAC6-236ENST00000498808 GPAT2Q6NUI2 795 aa19.74■□□□□ 0.75
HDAC6-236ENST00000498808 SUCLG2Q96I99 432 aa19.74■□□□□ 0.75
HDAC6-236ENST00000498808 C9orf78Q9NZ63 289 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-236ENST00000498808 EVI5O60447 810 aa19.73■□□□□ 0.75
HDAC6-236ENST00000498808 HHIPL2Q6UWX4 724 aa19.73■□□□□ 0.75
HDAC6-236ENST00000498808 PARK7Q99497 189 aaKnown RBP19.73■□□□□ 0.75
HDAC6-236ENST00000498808 STAP2Q9UGK3 403 aa19.73■□□□□ 0.75
HDAC6-236ENST00000498808 A0A0C4DFX4 3053 aa19.73■□□□□ 0.75
HDAC6-236ENST00000498808 MAST3O60307 1309 aa19.73■□□□□ 0.75
HDAC6-236ENST00000498808 BCAMP50895 628 aa19.72■□□□□ 0.75
HDAC6-236ENST00000498808 LRRC24Q50LG9 513 aa19.72■□□□□ 0.75
HDAC6-236ENST00000498808 CAVIN4Q5BKX8 364 aa19.72■□□□□ 0.75
HDAC6-236ENST00000498808 NOL9Q5SY16 702 aaKnown RBP19.72■□□□□ 0.75
HDAC6-236ENST00000498808 VGLL2Q8N8G2 317 aa19.72■□□□□ 0.75
HDAC6-236ENST00000498808 FAM151AQ8WW52 585 aa19.72■□□□□ 0.75
HDAC6-236ENST00000498808 SUGT1Q9Y2Z0 365 aa19.72■□□□□ 0.75
HDAC6-236ENST00000498808 AK9Q5TCS8 1911 aa19.71■□□□□ 0.75
HDAC6-236ENST00000498808 ADCY3O60266 1144 aa19.71■□□□□ 0.75
HDAC6-236ENST00000498808 ELNP15502 786 aa19.71■□□□□ 0.75
HDAC6-236ENST00000498808 EXOSC9Q06265 439 aaKnown RBP19.71■□□□□ 0.75
HDAC6-236ENST00000498808 ALDH1L1O75891 902 aa19.7■□□□□ 0.74
HDAC6-236ENST00000498808 INHAP05111 366 aa19.7■□□□□ 0.74
HDAC6-236ENST00000498808 FLT3LGP49771 235 aa19.7■□□□□ 0.74
HDAC6-236ENST00000498808 TCP10Q12799 353 aa19.7■□□□□ 0.74
HDAC6-236ENST00000498808 METTL24Q5JXM2 366 aa19.7■□□□□ 0.74
HDAC6-236ENST00000498808 CXCL11O14625 94 aa19.69■□□□□ 0.74
HDAC6-236ENST00000498808 PDE8BO95263 885 aa19.69■□□□□ 0.74
HDAC6-236ENST00000498808 NBPF7P0C2Y1 421 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-236ENST00000498808 MNX1P50219 401 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-236ENST00000498808 NFIAQ12857 509 aa19.69■□□□□ 0.74
HDAC6-236ENST00000498808 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
HDAC6-236ENST00000498808 DEFB118Q96PH6 123 aa19.69■□□□□ 0.74
HDAC6-236ENST00000498808 TFRCP02786 760 aaKnown RBP19.68■□□□□ 0.74
HDAC6-236ENST00000498808 CDC42EP5Q6NZY7 148 aa19.68■□□□□ 0.74
HDAC6-236ENST00000498808 PXYLP1Q8TE99 480 aa19.68■□□□□ 0.74
HDAC6-236ENST00000498808 SRCIN1Q9C0H9 1055 aa19.68■□□□□ 0.74
HDAC6-236ENST00000498808 PAK6Q9NQU5 681 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-236ENST00000498808 DAGLAQ9Y4D2 1042 aa19.68■□□□□ 0.74
HDAC6-236ENST00000498808 MYH13Q9UKX3 1938 aa19.68■□□□□ 0.74
HDAC6-236ENST00000498808 DOCK3Q8IZD9 2030 aa19.68■□□□□ 0.74
HDAC6-236ENST00000498808 PTPRFP10586 1907 aa19.67■□□□□ 0.74
HDAC6-236ENST00000498808 RABL6Q3YEC7 729 aaPredicted RBP19.67■□□□□ 0.74
HDAC6-236ENST00000498808 SLC4A10Q6U841 1118 aa19.67■□□□□ 0.74
HDAC6-236ENST00000498808 PAWRQ96IZ0 340 aaKnown RBP19.67■□□□□ 0.74
HDAC6-236ENST00000498808 GDF15Q99988 308 aa19.67■□□□□ 0.74
HDAC6-236ENST00000498808 CRISPLD2Q9H0B8 497 aa19.67■□□□□ 0.74
HDAC6-236ENST00000498808 BICC1Q9H694 974 aaKnown RBP19.67■□□□□ 0.74
HDAC6-236ENST00000498808 FAM198AQ9UFP1 575 aa19.67■□□□□ 0.74
HDAC6-236ENST00000498808 ATRNL1Q5VV63 1379 aa19.67■□□□□ 0.74
HDAC6-236ENST00000498808 A0A0G2JLL6 359 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-236ENST00000498808 CAPN2P17655 700 aa19.66■□□□□ 0.74
HDAC6-236ENST00000498808 IRF5Q13568 498 aa19.66■□□□□ 0.74
HDAC6-236ENST00000498808 DIXDC1Q155Q3 683 aa19.66■□□□□ 0.74
HDAC6-236ENST00000498808 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
HDAC6-236ENST00000498808 PRRT2Q7Z6L0 340 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-236ENST00000498808 ANKRD44Q8N8A2 993 aa19.66■□□□□ 0.74
HDAC6-236ENST00000498808 DIS3LQ8TF46 1054 aaKnown RBP19.66■□□□□ 0.74
HDAC6-236ENST00000498808 UTYO14607 1347 aa19.66■□□□□ 0.74
HDAC6-236ENST00000498808 KIF16BQ96L93 1317 aa19.66■□□□□ 0.74
HDAC6-236ENST00000498808 TNPO2O14787 897 aaKnown RBP19.65■□□□□ 0.74
HDAC6-236ENST00000498808 FGFR2P21802 821 aa19.65■□□□□ 0.74
HDAC6-236ENST00000498808 ZFPM1Q8IX07 1006 aa19.65■□□□□ 0.74
HDAC6-236ENST00000498808 KLHDC4Q8TBB5 520 aa19.65■□□□□ 0.74
HDAC6-236ENST00000498808 ZHX2Q9Y6X8 837 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms