RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	RRP1	P56182	461 aa	Known RBP	12.88	□□□□□ -0.35
FXR1-222	ENST00000498658	MAP3K11	Q16584	847 aa		12.88	□□□□□ -0.35
FXR1-222	ENST00000498658	RHPN1	Q8TCX5	695 aa		12.88	□□□□□ -0.35
FXR1-222	ENST00000498658	FAM163A	Q96GL9	167 aa	Predicted RBP	12.88	□□□□□ -0.35
FXR1-222	ENST00000498658	DBNDD2	Q9BQY9	259 aa		12.88	□□□□□ -0.35
FXR1-222	ENST00000498658	DAGLA	Q9Y4D2	1042 aa		12.88	□□□□□ -0.35
FXR1-222	ENST00000498658	SPDYE4	A6NLX3	237 aa		12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	TCP10L2	B9ZVM9	353 aa		12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	MAP4K4	O95819	1239 aa	Predicted RBP	12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	SLC10A3	P09131	477 aa		12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	IREB2	P48200	963 aa	Known RBP	12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	CTCF	P49711	727 aa	Predicted RBP	12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	DIXDC1	Q155Q3	683 aa		12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	AACS	Q86V21	672 aa		12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	SIRT2	Q8IXJ6	389 aa		12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	EAF2	Q96CJ1	260 aa	Predicted RBP	12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	LRP2BP	Q9P2M1	347 aa		12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	DBNL	Q9UJU6	430 aa	Known RBP	12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	ANGEL1	Q9UNK9	670 aa	Known RBP	12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	GAK	O14976	1311 aa		12.87	□□□□□ -0.35
FXR1-222	ENST00000498658	FAM155A	B1AL88	458 aa	Predicted RBP	12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	UBE2Q2L	H0YL09	131 aa		12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	AOC2	O75106	756 aa		12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	MCAM	P43121	646 aa		12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	LDLRAD1	Q5T700	205 aa		12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	TMED8	Q6PL24	325 aa	Predicted RBP	12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	RAI14	Q9P0K7	980 aa		12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	AOX1	Q06278	1338 aa		12.86	□□□□□ -0.35
FXR1-222	ENST00000498658	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	IFIT2	P09913	472 aa	Known RBP	12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	MECOM	Q03112	1051 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	AAMP	Q13685	434 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	DCAF15	Q66K64	600 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	CDC42EP5	Q6NZY7	148 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	MOB2	Q70IA6	237 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	RASAL3	Q86YV0	1011 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	ANKRD13A	Q8IZ07	590 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	FAM151A	Q8WW52	585 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	SLC10A4	Q96EP9	437 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	NOL10	Q9BSC4	688 aa	Known RBP	12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	TMEM39B	Q9GZU3	492 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	USP40	Q9NVE5	1235 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	MYH2	Q9UKX2	1941 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	MROH7-TTC4	A0A0A0MT08	1334 aa		12.85	□□□□□ -0.35
FXR1-222	ENST00000498658	GPR75-ASB3	A0A0A6YYF3	556 aa		12.84	□□□□□ -0.35
FXR1-222	ENST00000498658	PRKG1	Q13976	671 aa		12.84	□□□□□ -0.35
FXR1-222	ENST00000498658	NSUN4	Q96CB9	384 aa	Known RBP	12.84	□□□□□ -0.35
FXR1-222	ENST00000498658	TEPSIN	Q96N21	525 aa		12.84	□□□□□ -0.35
FXR1-222	ENST00000498658	IDI2	Q9BXS1	227 aa		12.84	□□□□□ -0.35
FXR1-222	ENST00000498658	IL1RAPL2	Q9NP60	686 aa		12.84	□□□□□ -0.35
FXR1-222	ENST00000498658	PRDM10	Q9NQV6	1147 aa		12.84	□□□□□ -0.35
FXR1-222	ENST00000498658	APBB1	O00213	710 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	FOXN1	O15353	648 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	ENTPD3	O75355	529 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	USP2	O75604	605 aa	Predicted RBP	12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	BAG3	O95817	575 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	ZBTB48	P10074	688 aa	Predicted RBP	12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	CACNB3	P54284	484 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	KIF23	Q02241	960 aa	Predicted RBP	12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	SREBF2	Q12772	1141 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	TTF1	Q15361	905 aa	Predicted RBP	12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	NAA16	Q6N069	864 aa	Predicted RBP	12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	PI16	Q6UXB8	463 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	TBC1D9	Q6ZT07	1266 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	CERS3	Q8IU89	383 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	LRRCC1	Q9C099	1032 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	SAGE1	Q9NXZ1	904 aa		12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	TLR7	Q9NYK1	1049 aa	Known RBP	12.83	□□□□□ -0.36
FXR1-222	ENST00000498658	SSC5D	A1L4H1	1573 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	CYP2E1	P05181	493 aa	Predicted RBP	12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	PLCG2	P16885	1265 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	BTD	P43251	543 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	INHBE	P58166	350 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	MAP3K9	P80192	1104 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	DCTPP1	Q9H773	170 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	SNRK	Q9NRH2	765 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	CSAD	Q9Y600	493 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	AKAP11	Q9UKA4	1901 aa		12.82	□□□□□ -0.36
FXR1-222	ENST00000498658	ZAP70	P43403	619 aa		12.81	□□□□□ -0.36
FXR1-222	ENST00000498658	TCP10	Q12799	353 aa		12.81	□□□□□ -0.36
FXR1-222	ENST00000498658	MAP3K12	Q12852	859 aa		12.81	□□□□□ -0.36
FXR1-222	ENST00000498658	SPRYD7	Q5W111	196 aa		12.81	□□□□□ -0.36
FXR1-222	ENST00000498658	CSRNP1	Q96S65	589 aa		12.81	□□□□□ -0.36
FXR1-222	ENST00000498658	MANSC4	A6NHS7	340 aa	Predicted RBP	12.8	□□□□□ -0.36
FXR1-222	ENST00000498658	TM4SF4	P48230	202 aa		12.8	□□□□□ -0.36
FXR1-222	ENST00000498658	RGS3	P49796	1198 aa		12.8	□□□□□ -0.36
FXR1-222	ENST00000498658	NFIA	Q12857	509 aa		12.8	□□□□□ -0.36
FXR1-222	ENST00000498658	ZNF341	Q9BYN7	854 aa		12.8	□□□□□ -0.36
FXR1-222	ENST00000498658	FAM198A	Q9UFP1	575 aa		12.8	□□□□□ -0.36
FXR1-222	ENST00000498658	MAST2	Q6P0Q8	1798 aa		12.79	□□□□□ -0.36
FXR1-222	ENST00000498658	IDH1	O75874	414 aa	Known RBP	12.79	□□□□□ -0.36
FXR1-222	ENST00000498658	HSPA8	P11142	646 aa	Known RBP	12.79	□□□□□ -0.36
FXR1-222	ENST00000498658	LBX1	P52954	281 aa		12.79	□□□□□ -0.36
FXR1-222	ENST00000498658	PPP4C	P60510	307 aa		12.79	□□□□□ -0.36
FXR1-222	ENST00000498658	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.79	□□□□□ -0.36
FXR1-222	ENST00000498658	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
FXR1-222	ENST00000498658	ZNF384	Q8TF68	577 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms