RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SPDYE2BA6NHP3 402 aa16.33■□□□□ 0.2
CPNE1-227ENST00000498056 SPDYE6P0CI01 402 aa16.33■□□□□ 0.2
CPNE1-227ENST00000498056 CHMLP26374 656 aa16.33■□□□□ 0.2
CPNE1-227ENST00000498056 ZMYM1Q5SVZ6 1142 aa16.33■□□□□ 0.2
CPNE1-227ENST00000498056 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-227ENST00000498056 CCDC129Q6ZRS4 1044 aa16.33■□□□□ 0.2
CPNE1-227ENST00000498056 LCORLQ8N3X6 602 aa16.33■□□□□ 0.2
CPNE1-227ENST00000498056 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
CPNE1-227ENST00000498056 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
CPNE1-227ENST00000498056 PUS7LQ9H0K6 701 aaKnown RBP16.33■□□□□ 0.2
CPNE1-227ENST00000498056 ADARB2Q9NS39 739 aaKnown RBP16.33■□□□□ 0.2
CPNE1-227ENST00000498056 RAD50Q92878 1312 aa16.33■□□□□ 0.2
CPNE1-227ENST00000498056 CLRN2A0PK11 232 aa16.32■□□□□ 0.2
CPNE1-227ENST00000498056 BAG3O95817 575 aa16.32■□□□□ 0.2
CPNE1-227ENST00000498056 EPHX2P34913 555 aa16.32■□□□□ 0.2
CPNE1-227ENST00000498056 DYNLL1P63167 89 aaKnown RBP16.32■□□□□ 0.2
CPNE1-227ENST00000498056 OSBP2Q969R2 916 aa16.32■□□□□ 0.2
CPNE1-227ENST00000498056 ARMT1Q9H993 441 aa16.32■□□□□ 0.2
CPNE1-227ENST00000498056 TMOD2Q9NZR1 351 aa16.32■□□□□ 0.2
CPNE1-227ENST00000498056 TRPM7Q96QT4 1865 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 ATAD5Q96QE3 1844 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 GPR75-ASB3A0A0A6YYF3 556 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 GPAA1O43292 621 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 MYO1BO43795 1136 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 MMP14P50281 582 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 EAPPQ56P03 285 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-227ENST00000498056 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-227ENST00000498056 RUFY2Q8WXA3 655 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
CPNE1-227ENST00000498056 NMRK2Q9NPI5 230 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 HELLSQ9NRZ9 838 aa16.31■□□□□ 0.2
CPNE1-227ENST00000498056 WNT10BO00744 389 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 PLCG2P16885 1265 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 NBPF9Q3BBW0 867 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 APOBEC3HQ6NTF7 200 aaKnown RBP16.3■□□□□ 0.2
CPNE1-227ENST00000498056 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
CPNE1-227ENST00000498056 TICAM2Q86XR7 235 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 TEX11Q8IYF3 940 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 MTMR14Q8NCE2 650 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 FAM163AQ96GL9 167 aaPredicted RBP16.3■□□□□ 0.2
CPNE1-227ENST00000498056 PRMT6Q96LA8 375 aaPredicted RBP16.3■□□□□ 0.2
CPNE1-227ENST00000498056 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
CPNE1-227ENST00000498056 IL25Q9H293 177 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 TAF1DQ9H5J8 278 aaPredicted RBP16.3■□□□□ 0.2
CPNE1-227ENST00000498056 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 GGA3Q9NZ52 723 aa16.3■□□□□ 0.2
CPNE1-227ENST00000498056 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
CPNE1-227ENST00000498056 ASTN2O75129 1339 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-227ENST00000498056 CACNB3P54284 484 aa16.29■□□□□ 0.2
CPNE1-227ENST00000498056 CDC42EP5Q6NZY7 148 aa16.29■□□□□ 0.2
CPNE1-227ENST00000498056 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
CPNE1-227ENST00000498056 MRIQ9BWK5 157 aa16.29■□□□□ 0.2
CPNE1-227ENST00000498056 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
CPNE1-227ENST00000498056 RRAGCQ9HB90 399 aa16.29■□□□□ 0.2
CPNE1-227ENST00000498056 USP40Q9NVE5 1235 aa16.29■□□□□ 0.2
CPNE1-227ENST00000498056 POTECB2RU33 542 aa16.28■□□□□ 0.2
CPNE1-227ENST00000498056 YY1P25490 414 aa16.28■□□□□ 0.2
CPNE1-227ENST00000498056 USP5P45974 858 aa16.28■□□□□ 0.2
CPNE1-227ENST00000498056 MFAP1P55081 439 aaKnown RBP16.28■□□□□ 0.2
CPNE1-227ENST00000498056 RHBDL3P58872 404 aa16.28■□□□□ 0.2
CPNE1-227ENST00000498056 PICALMQ13492 652 aa16.28■□□□□ 0.2
CPNE1-227ENST00000498056 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
CPNE1-227ENST00000498056 USP50Q70EL3 339 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-227ENST00000498056 ZBED3Q96IU2 234 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-227ENST00000498056 ESYT1Q9BSJ8 1104 aa16.28■□□□□ 0.2
CPNE1-227ENST00000498056 GPBP1L1Q9HC44 474 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-227ENST00000498056 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
CPNE1-227ENST00000498056 VEGFAP15692 232 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-227ENST00000498056 ANGEL2Q5VTE6 544 aaKnown RBP16.27■□□□□ 0.2
CPNE1-227ENST00000498056 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
CPNE1-227ENST00000498056 ZNF70Q9UC06 446 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-227ENST00000498056 FLT1P17948 1338 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 SGSM2O43147 1006 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 PRKAB2O43741 272 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 GNAT2P19087 354 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-227ENST00000498056 PPP4CP60510 307 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 PNMA8AQ86V59 439 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-227ENST00000498056 MAPKAPK5Q8IW41 473 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 TGFBRAP1Q8WUH2 860 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 STRBPQ96SI9 672 aaKnown RBP16.26■□□□□ 0.19
CPNE1-227ENST00000498056 ANO2Q9NQ90 1003 aa16.26■□□□□ 0.19
CPNE1-227ENST00000498056 SCAF8Q9UPN6 1271 aaKnown RBP16.26■□□□□ 0.19
CPNE1-227ENST00000498056 WDHD1O75717 1129 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-227ENST00000498056 APPP05067 770 aa16.25■□□□□ 0.19
CPNE1-227ENST00000498056 TDO2P48775 406 aa16.25■□□□□ 0.19
CPNE1-227ENST00000498056 NFIAQ12857 509 aa16.25■□□□□ 0.19
CPNE1-227ENST00000498056 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
CPNE1-227ENST00000498056 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
CPNE1-227ENST00000498056 DDRGK1Q96HY6 314 aa16.25■□□□□ 0.19
CPNE1-227ENST00000498056 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
CPNE1-227ENST00000498056 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
CPNE1-227ENST00000498056 COL2A1P02458 1487 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-227ENST00000498056 POTEIP0CG38 1075 aa16.24■□□□□ 0.19
CPNE1-227ENST00000498056 POTEJP0CG39 1038 aa16.24■□□□□ 0.19
CPNE1-227ENST00000498056 TCP10Q12799 353 aa16.24■□□□□ 0.19
CPNE1-227ENST00000498056 TNFAIP1Q13829 316 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms