RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 CERS5Q8N5B7 392 aa13.14□□□□□ -0.31
PKP4-215ENST00000494945 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
PKP4-215ENST00000494945 ZNF277Q9NRM2 450 aaPredicted RBP13.14□□□□□ -0.31
PKP4-215ENST00000494945 GAKO14976 1311 aa13.13□□□□□ -0.31
PKP4-215ENST00000494945 GSG1L2A8MUP6 293 aa13.13□□□□□ -0.31
PKP4-215ENST00000494945 NFKBIEO00221 500 aa13.13□□□□□ -0.31
PKP4-215ENST00000494945 PLCG2P16885 1265 aa13.13□□□□□ -0.31
PKP4-215ENST00000494945 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
PKP4-215ENST00000494945 NIM1KQ8IY84 436 aa13.13□□□□□ -0.31
PKP4-215ENST00000494945 CRNKL1Q9BZJ0 848 aaKnown RBP13.13□□□□□ -0.31
PKP4-215ENST00000494945 NAPBQ9H115 298 aa13.13□□□□□ -0.31
PKP4-215ENST00000494945 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
PKP4-215ENST00000494945 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
PKP4-215ENST00000494945 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
PKP4-215ENST00000494945 MYH6P13533 1939 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 YDJCA8MPS7 323 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 MCM2P49736 904 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 NEK4P51957 841 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 DYNLL1P63167 89 aaKnown RBP13.12□□□□□ -0.31
PKP4-215ENST00000494945 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
PKP4-215ENST00000494945 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 HHIPL2Q6UWX4 724 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
PKP4-215ENST00000494945 MRIQ9BWK5 157 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 EPB41L4AQ9HCS5 686 aaPredicted RBP13.12□□□□□ -0.31
PKP4-215ENST00000494945 ATP8A2Q9NTI2 1148 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 ZNRF3Q9ULT6 936 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
PKP4-215ENST00000494945 CYP46A1Q9Y6A2 500 aa13.12□□□□□ -0.31
PKP4-215ENST00000494945 ZNF213O14771 459 aa13.11□□□□□ -0.31
PKP4-215ENST00000494945 PRKAB2O43741 272 aa13.11□□□□□ -0.31
PKP4-215ENST00000494945 HMGB1P09429 215 aaKnown RBP13.11□□□□□ -0.31
PKP4-215ENST00000494945 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
PKP4-215ENST00000494945 TDO2P48775 406 aa13.11□□□□□ -0.31
PKP4-215ENST00000494945 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
PKP4-215ENST00000494945 BLOC1S2Q6QNY1 142 aa13.11□□□□□ -0.31
PKP4-215ENST00000494945 RUFY3Q7L099 469 aa13.11□□□□□ -0.31
PKP4-215ENST00000494945 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
PKP4-215ENST00000494945 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
PKP4-215ENST00000494945 E7EWF7 191 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 BTDP43251 543 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 SDR42E1Q8WUS8 393 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 JDP2Q8WYK2 163 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 TEKT1Q969V4 418 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 SYT17Q9BSW7 474 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 MXD3Q9BW11 206 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 UPF3BQ9BZI7 483 aaKnown RBP13.1□□□□□ -0.31
PKP4-215ENST00000494945 DAGLAQ9Y4D2 1042 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 TAF6LQ9Y6J9 622 aa13.1□□□□□ -0.31
PKP4-215ENST00000494945 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
PKP4-215ENST00000494945 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
PKP4-215ENST00000494945 VIL1P09327 827 aaKnown RBP13.09□□□□□ -0.31
PKP4-215ENST00000494945 RPS6KB1P23443 525 aa13.09□□□□□ -0.31
PKP4-215ENST00000494945 HAND2P61296 217 aa13.09□□□□□ -0.31
PKP4-215ENST00000494945 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
PKP4-215ENST00000494945 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
PKP4-215ENST00000494945 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
PKP4-215ENST00000494945 TTC14Q96N46 770 aa13.09□□□□□ -0.31
PKP4-215ENST00000494945 ALDH8A1Q9H2A2 487 aaPredicted RBP13.09□□□□□ -0.31
PKP4-215ENST00000494945 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
PKP4-215ENST00000494945 MYH4Q9Y623 1939 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
PKP4-215ENST00000494945 USP5P45974 858 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 CRKP46108 304 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 MMP14P50281 582 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 SBK1Q52WX2 424 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 KIAA0825Q8IV33 1275 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 TEX11Q8IYF3 940 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 ZDHHC15Q96MV8 337 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 NBPF3Q9H094 633 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 DCP1AQ9NPI6 582 aaPredicted RBP13.08□□□□□ -0.32
PKP4-215ENST00000494945 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 ARPP21Q9UBL0 812 aaPredicted RBP13.08□□□□□ -0.32
PKP4-215ENST00000494945 SERPINA10Q9UK55 444 aa13.08□□□□□ -0.32
PKP4-215ENST00000494945 POLR2AP24928 1970 aaKnown RBP13.08□□□□□ -0.32
PKP4-215ENST00000494945 PSMD14O00487 310 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 RAD17O75943 681 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 SCNN1DP51172 638 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 RHBDL3P58872 404 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 RASSF7Q02833 373 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 TRDNQ13061 729 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 TNIP1Q15025 636 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 CIAPIN1Q6FI81 312 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 DHX32Q7L7V1 743 aaKnown RBP13.07□□□□□ -0.32
PKP4-215ENST00000494945 AGBL3Q8NEM8 1001 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 NCOA7Q8NI08 942 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 GMLQ99445 158 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 CNNM2Q9H8M5 875 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 WDR19Q8NEZ3 1342 aa13.07□□□□□ -0.32
PKP4-215ENST00000494945 GREB1LQ9C091 1923 aaPredicted RBP13.06□□□□□ -0.32
PKP4-215ENST00000494945 PCP11498 1178 aaKnown RBP13.06□□□□□ -0.32
PKP4-215ENST00000494945 CPA1P15085 419 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 CXCL9Q07325 125 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 PPARAQ07869 468 aa13.06□□□□□ -0.32
PKP4-215ENST00000494945 AKNAD1Q5T1N1 836 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms