RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 CACNB3P54284 484 aa25.36■■□□□ 1.65
CCDC12-207ENST00000494655 MAP2K1Q02750 393 aaPredicted RBP25.36■■□□□ 1.65
CCDC12-207ENST00000494655 AAMPQ13685 434 aa25.36■■□□□ 1.65
CCDC12-207ENST00000494655 PRKG1Q13976 671 aa25.36■■□□□ 1.65
CCDC12-207ENST00000494655 TBC1D9Q6ZT07 1266 aa25.36■■□□□ 1.65
CCDC12-207ENST00000494655 FAM83AQ86UY5 434 aa25.36■■□□□ 1.65
CCDC12-207ENST00000494655 BEGAINQ9BUH8 593 aa25.36■■□□□ 1.65
CCDC12-207ENST00000494655 ANGEL1Q9UNK9 670 aaKnown RBP25.36■■□□□ 1.65
CCDC12-207ENST00000494655 RPAP1Q9BWH6 1393 aaPredicted RBP25.35■■□□□ 1.65
CCDC12-207ENST00000494655 USP40Q9NVE5 1235 aa25.35■■□□□ 1.65
CCDC12-207ENST00000494655 SSC5DA1L4H1 1573 aa25.35■■□□□ 1.65
CCDC12-207ENST00000494655 HSPA1AP0DMV8 641 aaKnown RBP25.34■■□□□ 1.65
CCDC12-207ENST00000494655 HSPA1BP0DMV9 641 aaKnown RBP25.34■■□□□ 1.65
CCDC12-207ENST00000494655 IREB2P48200 963 aaKnown RBP25.34■■□□□ 1.65
CCDC12-207ENST00000494655 CDC42EP5Q6NZY7 148 aa25.34■■□□□ 1.65
CCDC12-207ENST00000494655 TMEM39BQ9GZU3 492 aa25.34■■□□□ 1.65
CCDC12-207ENST00000494655 UBE2Q2LH0YL09 131 aa25.33■■□□□ 1.65
CCDC12-207ENST00000494655 BTDP43251 543 aa25.33■■□□□ 1.65
CCDC12-207ENST00000494655 ZAP70P43403 619 aa25.33■■□□□ 1.65
CCDC12-207ENST00000494655 NBPF12Q5TAG4 269 aaPredicted RBP25.33■■□□□ 1.65
CCDC12-207ENST00000494655 MOB2Q70IA6 237 aa25.33■■□□□ 1.65
CCDC12-207ENST00000494655 FAM163AQ96GL9 167 aaPredicted RBP25.33■■□□□ 1.65
CCDC12-207ENST00000494655 AK9Q5TCS8 1911 aa25.32■■□□□ 1.64
CCDC12-207ENST00000494655 SLC10A3P09131 477 aa25.32■■□□□ 1.64
CCDC12-207ENST00000494655 NAA16Q6N069 864 aaPredicted RBP25.32■■□□□ 1.64
CCDC12-207ENST00000494655 NSUN4Q96CB9 384 aaKnown RBP25.32■■□□□ 1.64
CCDC12-207ENST00000494655 ZBTB47Q9UFB7 747 aaPredicted RBP25.32■■□□□ 1.64
CCDC12-207ENST00000494655 DOCK2Q92608 1830 aa25.32■■□□□ 1.64
CCDC12-207ENST00000494655 AOC2O75106 756 aa25.31■■□□□ 1.64
CCDC12-207ENST00000494655 CYP2E1P05181 493 aaPredicted RBP25.31■■□□□ 1.64
CCDC12-207ENST00000494655 TTF1Q15361 905 aaPredicted RBP25.31■■□□□ 1.64
CCDC12-207ENST00000494655 GPATCH3Q96I76 525 aa25.31■■□□□ 1.64
CCDC12-207ENST00000494655 DCTPP1Q9H773 170 aa25.31■■□□□ 1.64
CCDC12-207ENST00000494655 MAP4K4O95819 1239 aaPredicted RBP25.3■■□□□ 1.64
CCDC12-207ENST00000494655 RASAL3Q86YV0 1011 aa25.3■■□□□ 1.64
CCDC12-207ENST00000494655 FAM151AQ8WW52 585 aa25.3■■□□□ 1.64
CCDC12-207ENST00000494655 PCDHB15Q9Y5E8 787 aa25.3■■□□□ 1.64
CCDC12-207ENST00000494655 OTOFQ9HC10 1997 aa25.29■■□□□ 1.64
CCDC12-207ENST00000494655 UNCXA6NJT0 531 aa25.29■■□□□ 1.64
CCDC12-207ENST00000494655 IDH1O75874 414 aaKnown RBP25.29■■□□□ 1.64
CCDC12-207ENST00000494655 BAG3O95817 575 aa25.29■■□□□ 1.64
CCDC12-207ENST00000494655 MAP3K11Q16584 847 aa25.29■■□□□ 1.64
CCDC12-207ENST00000494655 DCAF15Q66K64 600 aa25.29■■□□□ 1.64
CCDC12-207ENST00000494655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.29■■□□□ 1.64
CCDC12-207ENST00000494655 TEPSINQ96N21 525 aa25.29■■□□□ 1.64
CCDC12-207ENST00000494655 MYO5AQ9Y4I1 1855 aaKnown RBP25.29■■□□□ 1.64
CCDC12-207ENST00000494655 GPR75-ASB3A0A0A6YYF3 556 aa25.28■■□□□ 1.64
CCDC12-207ENST00000494655 TCP10Q12799 353 aa25.28■■□□□ 1.64
CCDC12-207ENST00000494655 MAP3K12Q12852 859 aa25.28■■□□□ 1.64
CCDC12-207ENST00000494655 TMED8Q6PL24 325 aaPredicted RBP25.28■■□□□ 1.64
CCDC12-207ENST00000494655 SUPT16HQ9Y5B9 1047 aaKnown RBP25.28■■□□□ 1.64
CCDC12-207ENST00000494655 FAM155AB1AL88 458 aaPredicted RBP25.27■■□□□ 1.64
CCDC12-207ENST00000494655 PLCG2P16885 1265 aa25.27■■□□□ 1.64
CCDC12-207ENST00000494655 REM2Q8IYK8 340 aaPredicted RBP25.27■■□□□ 1.64
CCDC12-207ENST00000494655 ANKRD13AQ8IZ07 590 aa25.27■■□□□ 1.64
CCDC12-207ENST00000494655 DNAJC2Q99543 621 aaKnown RBP25.27■■□□□ 1.64
CCDC12-207ENST00000494655 IDI2Q9BXS1 227 aa25.27■■□□□ 1.64
CCDC12-207ENST00000494655 PIH1D3Q9NQM4 214 aaKnown RBP25.27■■□□□ 1.64
CCDC12-207ENST00000494655 SMARCA5O60264 1052 aaPredicted RBP25.26■■□□□ 1.63
CCDC12-207ENST00000494655 ENTPD3O75355 529 aa25.26■■□□□ 1.63
CCDC12-207ENST00000494655 NFIAQ12857 509 aa25.26■■□□□ 1.63
CCDC12-207ENST00000494655 LDLRAD1Q5T700 205 aa25.26■■□□□ 1.63
CCDC12-207ENST00000494655 WBP1LQ9NX94 342 aa25.26■■□□□ 1.63
CCDC12-207ENST00000494655 FZD1Q9UP38 647 aa25.26■■□□□ 1.63
CCDC12-207ENST00000494655 CA12O43570 354 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 RGS3P49796 1198 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 PICALMQ13492 652 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 CERS3Q8IU89 383 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 ZSCAN29Q8IWY8 852 aaPredicted RBP25.25■■□□□ 1.63
CCDC12-207ENST00000494655 CDAN1Q8IWY9 1227 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 ZNF384Q8TF68 577 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 SLC10A4Q96EP9 437 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.25■■□□□ 1.63
CCDC12-207ENST00000494655 CSADQ9Y600 493 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 RFX7Q2KHR2 1363 aa25.25■■□□□ 1.63
CCDC12-207ENST00000494655 FAM198AQ9UFP1 575 aa25.24■■□□□ 1.63
CCDC12-207ENST00000494655 NDUFB9Q9Y6M9 179 aa25.24■■□□□ 1.63
CCDC12-207ENST00000494655 USP2O75604 605 aaPredicted RBP25.23■■□□□ 1.63
CCDC12-207ENST00000494655 ATP5JP18859 108 aa25.23■■□□□ 1.63
CCDC12-207ENST00000494655 KIF23Q02241 960 aaPredicted RBP25.23■■□□□ 1.63
CCDC12-207ENST00000494655 TEX11Q8IYF3 940 aa25.23■■□□□ 1.63
CCDC12-207ENST00000494655 AATFQ9NY61 560 aaKnown RBP eCLIP25.23■■□□□ 1.63
CCDC12-207ENST00000494655 GOLIM4O00461 696 aa25.22■■□□□ 1.63
CCDC12-207ENST00000494655 WDHD1O75717 1129 aaPredicted RBP25.22■■□□□ 1.63
CCDC12-207ENST00000494655 CYP7A1P22680 504 aa25.22■■□□□ 1.63
CCDC12-207ENST00000494655 CTCFP49711 727 aaPredicted RBP25.22■■□□□ 1.63
CCDC12-207ENST00000494655 HDAC1Q13547 482 aaPredicted RBP25.22■■□□□ 1.63
CCDC12-207ENST00000494655 MAGEB6Q8N7X4 407 aa25.22■■□□□ 1.63
CCDC12-207ENST00000494655 GCC1Q96CN9 775 aa25.22■■□□□ 1.63
CCDC12-207ENST00000494655 CSRNP1Q96S65 589 aa25.22■■□□□ 1.63
CCDC12-207ENST00000494655 ZNF341Q9BYN7 854 aa25.22■■□□□ 1.63
CCDC12-207ENST00000494655 ECHDC1Q9NTX5 307 aa25.22■■□□□ 1.63
CCDC12-207ENST00000494655 PCNTO95613 3336 aa25.21■■□□□ 1.63
CCDC12-207ENST00000494655 RHBDL3P58872 404 aa25.21■■□□□ 1.63
CCDC12-207ENST00000494655 SREBF2Q12772 1141 aa25.21■■□□□ 1.63
CCDC12-207ENST00000494655 WRNIP1Q96S55 665 aa25.21■■□□□ 1.63
CCDC12-207ENST00000494655 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.21■■□□□ 1.634e-12■□□□□ 8.4
CCDC12-207ENST00000494655 ANTXR1Q9H6X2 564 aa25.21■■□□□ 1.63
CCDC12-207ENST00000494655 PAG1Q9NWQ8 432 aa25.21■■□□□ 1.63
CCDC12-207ENST00000494655 FOCADQ5VW36 1801 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms