RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 ZSCAN25Q6NSZ9 544 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 HHIPL2Q6UWX4 724 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 CNPY4Q8N129 248 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 ZBED3Q96IU2 234 aaPredicted RBP11.28□□□□□ -0.6
CSTF1-206ENST00000493039 PRMT6Q96LA8 375 aaPredicted RBP11.28□□□□□ -0.6
CSTF1-206ENST00000493039 ESYT1Q9BSJ8 1104 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 DIAPH3Q9NSV4 1193 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 CNOT7Q9UIV1 285 aaKnown RBP11.28□□□□□ -0.6
CSTF1-206ENST00000493039 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 MROH7-TTC4A0A0A0MT08 1334 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
CSTF1-206ENST00000493039 GLTPD2A6NH11 291 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 POTECB2RU33 542 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 EPS15P42566 896 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 RHBDL3P58872 404 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 ZDHHC15Q96MV8 337 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 STRBPQ96SI9 672 aaKnown RBP11.28□□□□□ -0.6
CSTF1-206ENST00000493039 HELLSQ9NRZ9 838 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
CSTF1-206ENST00000493039 PPP4CP60510 307 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 MCMDC2Q4G0Z9 681 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 VPS53Q5VIR6 699 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 SAMD7Q7Z3H4 446 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 LCORLQ8N3X6 602 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 SECISBP2LQ93073 1101 aaKnown RBP11.27□□□□□ -0.61
CSTF1-206ENST00000493039 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.61
CSTF1-206ENST00000493039 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 HIP1O00291 1037 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 GPAA1O43292 621 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 CLSTN1O94985 981 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 CFAP100Q494V2 611 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
CSTF1-206ENST00000493039 TEKT1Q969V4 418 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
CSTF1-206ENST00000493039 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
CSTF1-206ENST00000493039 PRKAB2O43741 272 aa11.26□□□□□ -0.61
CSTF1-206ENST00000493039 MBD4O95243 580 aa11.26□□□□□ -0.61
CSTF1-206ENST00000493039 BTDP43251 543 aa11.26□□□□□ -0.61
CSTF1-206ENST00000493039 HIRAP54198 1017 aaPredicted RBP11.26□□□□□ -0.61
CSTF1-206ENST00000493039 GSTO1P78417 241 aa11.26□□□□□ -0.61
CSTF1-206ENST00000493039 LRRFIP1Q32MZ4 808 aaKnown RBP11.26□□□□□ -0.61
CSTF1-206ENST00000493039 NBPF9Q3BBW0 867 aa11.26□□□□□ -0.61
CSTF1-206ENST00000493039 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
CSTF1-206ENST00000493039 MYOZ2Q9NPC6 264 aa11.26□□□□□ -0.61
CSTF1-206ENST00000493039 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
CSTF1-206ENST00000493039 MAGEB6P1A0A0J9YX57 407 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 WNT10BO00744 389 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 LDHCP07864 332 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 PTH1RQ03431 593 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 OGFOD1Q8N543 542 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 TRPM4Q8TD43 1214 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
CSTF1-206ENST00000493039 BACH2Q9BYV9 841 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 PRDM10Q9NQV6 1147 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 ASTN2O75129 1339 aaPredicted RBP11.25□□□□□ -0.61
CSTF1-206ENST00000493039 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
CSTF1-206ENST00000493039 TBC1D10BQ4KMP7 808 aaPredicted RBP11.25□□□□□ -0.61
CSTF1-206ENST00000493039 LSG1Q9H089 658 aaKnown RBP11.25□□□□□ -0.61
CSTF1-206ENST00000493039 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
CSTF1-206ENST00000493039 CCDC171Q6TFL3 1326 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 WDHD1O75717 1129 aaPredicted RBP11.24□□□□□ -0.61
CSTF1-206ENST00000493039 HSPD1P10809 573 aaKnown RBP11.24□□□□□ -0.61
CSTF1-206ENST00000493039 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
CSTF1-206ENST00000493039 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 TDRD3Q9H7E2 651 aaKnown RBP11.24□□□□□ -0.61
CSTF1-206ENST00000493039 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 MYH7P12883 1935 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 MYH2Q9UKX2 1941 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 RAD50Q92878 1312 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 RBM5P52756 815 aaKnown RBP eCLIP11.24□□□□□ -0.61
CSTF1-206ENST00000493039 CACNB3P54284 484 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 NFIAQ12857 509 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 SDR42E1Q8WUS8 393 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 RUFY2Q8WXA3 655 aa11.24□□□□□ -0.61
CSTF1-206ENST00000493039 EPB41L4AQ9HCS5 686 aaPredicted RBP11.24□□□□□ -0.61
CSTF1-206ENST00000493039 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
CSTF1-206ENST00000493039 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 MMP14P50281 582 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
CSTF1-206ENST00000493039 USP40Q9NVE5 1235 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 MAST2Q6P0Q8 1798 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 H7C1D1 291 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 BAG3O95817 575 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 CASC1Q6TDU7 716 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 ZFPM1Q8IX07 1006 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
CSTF1-206ENST00000493039 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
CSTF1-206ENST00000493039 EVX2Q03828 476 aa11.22□□□□□ -0.61
CSTF1-206ENST00000493039 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
CSTF1-206ENST00000493039 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
CSTF1-206ENST00000493039 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms