RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ALX1Q15699 326 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 C9orf131Q5VYM1 1079 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 NOL10Q9BSC4 688 aaKnown RBP16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 NACAP1Q9BZK3 213 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.27
PDZRN3-210ENST00000492909 PRKAB2O43741 272 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 BAG3O95817 575 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 PSMA5P28066 241 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 DACT2Q5SW24 774 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 CERS3Q8IU89 383 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 HSCBQ8IWL3 235 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 NIM1KQ8IY84 436 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 IFNL3Q8IZI9 196 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 JAKMIP1Q96N16 626 aaKnown RBP16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 NAPBQ9H115 298 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 RNF181Q9P0P0 153 aa16.76■□□□□ 0.27
PDZRN3-210ENST00000492909 LTBP3Q9NS15 1303 aa16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 LMNB1P20700 586 aa16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 CASTP20810 708 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 FAM163AQ96GL9 167 aaPredicted RBP16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 MXD3Q9BW11 206 aa16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 UPF3BQ9BZI7 483 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 CRNKL1Q9BZJ0 848 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 TTF2Q9UNY4 1162 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 COL4A5P29400 1685 aa16.75■□□□□ 0.27
PDZRN3-210ENST00000492909 ZNF213O14771 459 aa16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 EPB41L4AQ9HCS5 686 aaPredicted RBP16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 TAF6LQ9Y6J9 622 aa16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 BAZ2AQ9UIF9 1905 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 GAKO14976 1311 aa16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 F8W031 263 aaPredicted RBP16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 TDO2P48775 406 aa16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 PPP4CP60510 307 aa16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 SDR42E1Q8WUS8 393 aa16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 ZNRF3Q9ULT6 936 aa16.74■□□□□ 0.27
PDZRN3-210ENST00000492909 GPR75-ASB3A0A0A6YYF3 556 aa16.73■□□□□ 0.27
PDZRN3-210ENST00000492909 CD2BP2O95400 341 aaKnown RBP16.73■□□□□ 0.27
PDZRN3-210ENST00000492909 HAND2P61296 217 aa16.73■□□□□ 0.27
PDZRN3-210ENST00000492909 GIMAP6Q6P9H5 292 aa16.73■□□□□ 0.27
PDZRN3-210ENST00000492909 JDP2Q8WYK2 163 aa16.73■□□□□ 0.27
PDZRN3-210ENST00000492909 CDK5RAP2Q96SN8 1893 aa16.73■□□□□ 0.27
PDZRN3-210ENST00000492909 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
PDZRN3-210ENST00000492909 PLCG2P16885 1265 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 BTDP43251 543 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 BLOC1S2Q6QNY1 142 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 RUFY3Q7L099 469 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 ATP8A2Q9NTI2 1148 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 DAGLAQ9Y4D2 1042 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 E7EWF7 191 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 RAD17O75943 681 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 HHIPL2Q6UWX4 724 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 KIAA0825Q8IV33 1275 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 TEKT1Q969V4 418 aa16.72■□□□□ 0.27
PDZRN3-210ENST00000492909 MYO3BQ8WXR4 1341 aa16.71■□□□□ 0.27
PDZRN3-210ENST00000492909 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
PDZRN3-210ENST00000492909 MCM2P49736 904 aa16.71■□□□□ 0.27
PDZRN3-210ENST00000492909 SCNN1DP51172 638 aa16.71■□□□□ 0.27
PDZRN3-210ENST00000492909 GSE1Q14687 1217 aa16.71■□□□□ 0.27
PDZRN3-210ENST00000492909 STOX1Q6ZVD7 989 aa16.71■□□□□ 0.27
PDZRN3-210ENST00000492909 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.27
PDZRN3-210ENST00000492909 MRIQ9BWK5 157 aa16.71■□□□□ 0.27
PDZRN3-210ENST00000492909 ADAMTSL1Q8N6G6 1762 aa16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 K7ELQ4 463 aaPredicted RBP16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 VIL1P09327 827 aaKnown RBP16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 CPA1P15085 419 aa16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 HDLBPQ00341 1268 aaKnown RBP16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 TTC14Q96N46 770 aa16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 DCP1AQ9NPI6 582 aaPredicted RBP16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 LAMB1P07942 1786 aa16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 NAV1Q8NEY1 1877 aa16.7■□□□□ 0.26
PDZRN3-210ENST00000492909 PSMD14O00487 310 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 RPS6KB1P23443 525 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 USP5P45974 858 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 RSBN1LQ6PCB5 846 aaPredicted RBP16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 NBPF3Q9H094 633 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 PDRG1Q9NUG6 133 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 TIAM2Q8IVF5 1701 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 CRKP46108 304 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 SERPINA10Q9UK55 444 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 ECM29Q5VYK3 1845 aa16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 DICER1Q9UPY3 1922 aaKnown RBP16.69■□□□□ 0.26
PDZRN3-210ENST00000492909 RHBDL3P58872 404 aa16.68■□□□□ 0.26
PDZRN3-210ENST00000492909 CXCL9Q07325 125 aa16.68■□□□□ 0.26
PDZRN3-210ENST00000492909 TEX11Q8IYF3 940 aa16.68■□□□□ 0.26
PDZRN3-210ENST00000492909 ZDHHC15Q96MV8 337 aa16.68■□□□□ 0.26
PDZRN3-210ENST00000492909 MINDY4BA8MYZ0 360 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 AK2P54819 239 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 PPARAQ07869 468 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 TRDNQ13061 729 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 CIAPIN1Q6FI81 312 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 CTR9Q6PD62 1173 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 RALYLQ86SE5 291 aaKnown RBP16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 TBC1D10CQ8IV04 446 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms