RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CXCL9Q07325 125 aa26.99■■□□□ 1.91
USF3-203ENST00000491165 ZMYM1Q5SVZ6 1142 aa26.99■■□□□ 1.91
USF3-203ENST00000491165 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.99■■□□□ 1.91
USF3-203ENST00000491165 LDHBP07195 334 aaKnown RBP26.99■■□□□ 1.91
USF3-203ENST00000491165 DIXDC1Q155Q3 683 aa26.99■■□□□ 1.91
USF3-203ENST00000491165 CCDC129Q6ZRS4 1044 aa26.99■■□□□ 1.91
USF3-203ENST00000491165 TIAM2Q8IVF5 1701 aa26.99■■□□□ 1.91
USF3-203ENST00000491165 F8W031 263 aaPredicted RBP26.98■■□□□ 1.91
USF3-203ENST00000491165 TBC1D22AQ8WUA7 517 aa26.98■■□□□ 1.91
USF3-203ENST00000491165 RBM27Q9P2N5 1060 aaKnown RBP26.98■■□□□ 1.91
USF3-203ENST00000491165 M0R2C6 588 aa26.98■■□□□ 1.91
USF3-203ENST00000491165 MBD3O95983 291 aa26.98■■□□□ 1.91
USF3-203ENST00000491165 FOXD4L5Q5VV16 416 aaPredicted RBP26.98■■□□□ 1.91
USF3-203ENST00000491165 FOXD4L4Q8WXT5 416 aaPredicted RBP26.98■■□□□ 1.91
USF3-203ENST00000491165 MAST3O60307 1309 aa26.97■■□□□ 1.91
USF3-203ENST00000491165 FZD9O00144 591 aa26.97■■□□□ 1.91
USF3-203ENST00000491165 SGSM2O43147 1006 aa26.97■■□□□ 1.91
USF3-203ENST00000491165 UBE3CQ15386 1083 aa26.97■■□□□ 1.91
USF3-203ENST00000491165 RBSNQ9H1K0 784 aa26.97■■□□□ 1.91
USF3-203ENST00000491165 ZBTB12Q9Y330 459 aaPredicted RBP26.97■■□□□ 1.91
USF3-203ENST00000491165 NOL8Q76FK4 1167 aaKnown RBP26.96■■□□□ 1.91
USF3-203ENST00000491165 CHAMP1Q96JM3 812 aa26.96■■□□□ 1.91
USF3-203ENST00000491165 HSPA4P34932 840 aa26.96■■□□□ 1.91
USF3-203ENST00000491165 KIAA0825Q8IV33 1275 aa26.96■■□□□ 1.91
USF3-203ENST00000491165 HIP1O00291 1037 aa26.95■■□□□ 1.91
USF3-203ENST00000491165 ZFYP08048 801 aaPredicted RBP26.95■■□□□ 1.91
USF3-203ENST00000491165 VIL1P09327 827 aaKnown RBP26.95■■□□□ 1.91
USF3-203ENST00000491165 ZSCAN30Q86W11 494 aa26.95■■□□□ 1.91
USF3-203ENST00000491165 APPBP2Q92624 585 aa26.95■■□□□ 1.91
USF3-203ENST00000491165 UPF3BQ9BZI7 483 aaKnown RBP26.95■■□□□ 1.91
USF3-203ENST00000491165 CYP7A1P22680 504 aa26.95■■□□□ 1.9
USF3-203ENST00000491165 NAA16Q6N069 864 aaPredicted RBP26.95■■□□□ 1.9
USF3-203ENST00000491165 DZIP1Q86YF9 867 aaKnown RBP26.95■■□□□ 1.9
USF3-203ENST00000491165 MIGA1Q8NAN2 632 aa26.95■■□□□ 1.9
USF3-203ENST00000491165 TMEM63CQ9P1W3 806 aa26.95■■□□□ 1.9
USF3-203ENST00000491165 ZNF541Q9H0D2 1346 aa26.95■■□□□ 1.9
USF3-203ENST00000491165 SPTY2D1Q68D10 685 aaPredicted RBP26.94■■□□□ 1.9
USF3-203ENST00000491165 ZSCAN25Q6NSZ9 544 aa26.94■■□□□ 1.9
USF3-203ENST00000491165 LRSAM1Q6UWE0 723 aa26.93■■□□□ 1.9
USF3-203ENST00000491165 RNF181Q9P0P0 153 aa26.93■■□□□ 1.9
USF3-203ENST00000491165 TTF2Q9UNY4 1162 aaKnown RBP26.93■■□□□ 1.9
USF3-203ENST00000491165 SCNN1DP51172 638 aa26.93■■□□□ 1.9
USF3-203ENST00000491165 MCMDC2Q4G0Z9 681 aa26.93■■□□□ 1.9
USF3-203ENST00000491165 RSBN1LQ6PCB5 846 aaPredicted RBP26.93■■□□□ 1.9
USF3-203ENST00000491165 TICAM2Q86XR7 235 aa26.93■■□□□ 1.9
USF3-203ENST00000491165 FKBP1AP62942 108 aaKnown RBP26.92■■□□□ 1.9
USF3-203ENST00000491165 GMLQ99445 158 aa26.92■■□□□ 1.9
USF3-203ENST00000491165 HELLSQ9NRZ9 838 aa26.92■■□□□ 1.9
USF3-203ENST00000491165 PCDHAC2Q9Y5I4 1007 aa26.92■■□□□ 1.9
USF3-203ENST00000491165 RAD50Q92878 1312 aa26.92■■□□□ 1.9
USF3-203ENST00000491165 VPS53Q5VIR6 699 aa26.92■■□□□ 1.9
USF3-203ENST00000491165 C9orf131Q5VYM1 1079 aa26.92■■□□□ 1.9
USF3-203ENST00000491165 CIAPIN1Q6FI81 312 aa26.92■■□□□ 1.9
USF3-203ENST00000491165 LRRFIP1Q32MZ4 808 aaKnown RBP26.91■■□□□ 1.9
USF3-203ENST00000491165 HS1BP3Q53T59 392 aa26.91■■□□□ 1.9
USF3-203ENST00000491165 SUGT1Q9Y2Z0 365 aa26.9■■□□□ 1.9
USF3-203ENST00000491165 SYCE3A1L190 88 aa26.9■■□□□ 1.9
USF3-203ENST00000491165 FOXP2O15409 715 aa26.9■■□□□ 1.9
USF3-203ENST00000491165 GPAA1O43292 621 aa26.9■■□□□ 1.9
USF3-203ENST00000491165 DYNLL1P63167 89 aaKnown RBP26.9■■□□□ 1.9
USF3-203ENST00000491165 PTH1RQ03431 593 aa26.9■■□□□ 1.9
USF3-203ENST00000491165 LCORLQ8N3X6 602 aa26.9■■□□□ 1.9
USF3-203ENST00000491165 RUFY2Q8WXA3 655 aa26.9■■□□□ 1.9
USF3-203ENST00000491165 RIOK1Q9BRS2 568 aaKnown RBP26.9■■□□□ 1.9
USF3-203ENST00000491165 SHTN1A0MZ66 631 aa26.89■■□□□ 1.9
USF3-203ENST00000491165 GRIN3BO60391 1043 aa26.89■■□□□ 1.9
USF3-203ENST00000491165 PDLIM2Q96JY6 352 aa26.89■■□□□ 1.9
USF3-203ENST00000491165 AATFQ9NY61 560 aaKnown RBP eCLIP26.89■■□□□ 1.9
USF3-203ENST00000491165 CCDC171Q6TFL3 1326 aa26.89■■□□□ 1.89
USF3-203ENST00000491165 MBD4O95243 580 aa26.89■■□□□ 1.89
USF3-203ENST00000491165 ARMT1Q9H993 441 aa26.89■■□□□ 1.89
USF3-203ENST00000491165 MROH7-TTC4A0A0A0MT08 1334 aa26.88■■□□□ 1.89
USF3-203ENST00000491165 MSNP26038 577 aaKnown RBP26.88■■□□□ 1.89
USF3-203ENST00000491165 LSG1Q9H089 658 aaKnown RBP26.88■■□□□ 1.89
USF3-203ENST00000491165 WDR33Q9C0J8 1336 aaKnown RBP26.88■■□□□ 1.89
USF3-203ENST00000491165 CDK5RAP2Q96SN8 1893 aa26.88■■□□□ 1.89
USF3-203ENST00000491165 DAGLAQ9Y4D2 1042 aa26.87■■□□□ 1.89
USF3-203ENST00000491165 EIF6P56537 245 aaKnown RBP26.87■■□□□ 1.89
USF3-203ENST00000491165 GJA3Q9Y6H8 435 aa26.87■■□□□ 1.89
USF3-203ENST00000491165 GAKO14976 1311 aa26.86■■□□□ 1.89
USF3-203ENST00000491165 AIDAQ96BJ3 306 aa26.86■■□□□ 1.89
USF3-203ENST00000491165 STRBPQ96SI9 672 aaKnown RBP26.86■■□□□ 1.89
USF3-203ENST00000491165 MYO3BQ8WXR4 1341 aa26.85■■□□□ 1.89
USF3-203ENST00000491165 PRKAB2O43741 272 aa26.85■■□□□ 1.89
USF3-203ENST00000491165 SYAP1Q96A49 352 aaPredicted RBP26.85■■□□□ 1.89
USF3-203ENST00000491165 SNX14Q9Y5W7 946 aa26.85■■□□□ 1.89
USF3-203ENST00000491165 MAGEB6P1A0A0J9YX57 407 aa26.84■■□□□ 1.89
USF3-203ENST00000491165 CRKP46108 304 aa26.84■■□□□ 1.89
USF3-203ENST00000491165 TNIP1Q15025 636 aa26.84■■□□□ 1.89
USF3-203ENST00000491165 AGBL3Q8NEM8 1001 aa26.84■■□□□ 1.89
USF3-203ENST00000491165 FAM163AQ96GL9 167 aaPredicted RBP26.84■■□□□ 1.89
USF3-203ENST00000491165 HSPD1P10809 573 aaKnown RBP26.84■■□□□ 1.89
USF3-203ENST00000491165 KIAA1211Q6ZU35 1233 aa26.84■■□□□ 1.89
USF3-203ENST00000491165 BTDP43251 543 aa26.83■■□□□ 1.89
USF3-203ENST00000491165 GSTO1P78417 241 aa26.83■■□□□ 1.89
USF3-203ENST00000491165 GPR75-ASB3A0A0A6YYF3 556 aa26.83■■□□□ 1.88
USF3-203ENST00000491165 IGSF3O75054 1194 aa26.83■■□□□ 1.88
USF3-203ENST00000491165 GMPSP49915 693 aaPredicted RBP26.83■■□□□ 1.88
USF3-203ENST00000491165 APOBEC3HQ6NTF7 200 aaKnown RBP26.83■■□□□ 1.88
USF3-203ENST00000491165 BAZ2AQ9UIF9 1905 aaKnown RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms