RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
RBM39-236ENST00000490484 ABCF2Q9UG63 623 aa12.79□□□□□ -0.36
RBM39-236ENST00000490484 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
RBM39-236ENST00000490484 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 IGF2BP3O00425 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
RBM39-236ENST00000490484 NFIAQ12857 509 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 POLA2Q14181 598 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 FKBP1CQ5VVH2 108 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 PI16Q6UXB8 463 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 IFNL1Q8IU54 200 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 CSADQ9Y600 493 aa12.78□□□□□ -0.36
RBM39-236ENST00000490484 DOCK2Q92608 1830 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 GPR25O00155 361 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 ZBTB22O15209 634 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 ALDH1A1P00352 501 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 CTU1Q7Z7A3 348 aaKnown RBP12.77□□□□□ -0.37
RBM39-236ENST00000490484 SPATA5Q8NB90 893 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 SSH3Q8TE77 659 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 HOOK2Q96ED9 719 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 GAKO14976 1311 aa12.77□□□□□ -0.37
RBM39-236ENST00000490484 MAST2Q6P0Q8 1798 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 ZBTB7BO15156 539 aaPredicted RBP12.76□□□□□ -0.37
RBM39-236ENST00000490484 SURF6O75683 361 aaKnown RBP12.76□□□□□ -0.37
RBM39-236ENST00000490484 INHBEP58166 350 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 ATP8B2P98198 1209 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 DCAF15Q66K64 600 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 FAM151AQ8WW52 585 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 CFHR5Q9BXR6 569 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 HMG20BQ9P0W2 317 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 RFX7Q2KHR2 1363 aa12.76□□□□□ -0.37
RBM39-236ENST00000490484 HTTP42858 3142 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 MROH7-TTC4A0A0A0MT08 1334 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 SPDYE5A6NIY4 337 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 ARID4AP29374 1257 aaPredicted RBP12.75□□□□□ -0.37
RBM39-236ENST00000490484 MCAMP43121 646 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 BTDP43251 543 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 MECOMQ03112 1051 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 TNNI3KQ59H18 835 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 AK9Q5TCS8 1911 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 SPTY2D1Q68D10 685 aaPredicted RBP12.75□□□□□ -0.37
RBM39-236ENST00000490484 CEP85Q6P2H3 762 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 ZKSCAN4Q969J2 545 aaPredicted RBP12.75□□□□□ -0.37
RBM39-236ENST00000490484 ZNF341Q9BYN7 854 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 FPGT-TNNI3KV9GXZ4 949 aa12.75□□□□□ -0.37
RBM39-236ENST00000490484 FKTNO75072 461 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 RGS3P49796 1198 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 CRHR2Q13324 411 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 NOM1Q5C9Z4 860 aaKnown RBP12.74□□□□□ -0.37
RBM39-236ENST00000490484 TTC39AQ5SRH9 613 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 OTUD7BQ6GQQ9 843 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 ZFPM1Q8IX07 1006 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 SLF2Q8IX21 1173 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 PTPN18Q99952 460 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 DBNDD2Q9BQY9 259 aa12.74□□□□□ -0.37
RBM39-236ENST00000490484 CCL15-CCL14A0A0B4J2E2 113 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
RBM39-236ENST00000490484 UQCRFS1P1P0C7P4 283 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 INPP5BP32019 993 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 GTF2A2P52657 109 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 PICALMQ13492 652 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 CCL15Q16663 113 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 ERO1BQ86YB8 467 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 BRI3BPQ8WY22 251 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 GPR108Q9NPR9 543 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 TLR7Q9NYK1 1049 aaKnown RBP12.73□□□□□ -0.37
RBM39-236ENST00000490484 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
RBM39-236ENST00000490484 ATRNL1Q5VV63 1379 aa12.72□□□□□ -0.37
RBM39-236ENST00000490484 ENTPD3O75355 529 aa12.72□□□□□ -0.37
RBM39-236ENST00000490484 WDHD1O75717 1129 aaPredicted RBP12.72□□□□□ -0.37
RBM39-236ENST00000490484 CCDC158Q5M9N0 1113 aa12.72□□□□□ -0.37
RBM39-236ENST00000490484 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
RBM39-236ENST00000490484 NSUN4Q96CB9 384 aaKnown RBP12.72□□□□□ -0.37
RBM39-236ENST00000490484 IDI2Q9BXS1 227 aa12.72□□□□□ -0.37
RBM39-236ENST00000490484 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
RBM39-236ENST00000490484 SNRKQ9NRH2 765 aa12.72□□□□□ -0.37
RBM39-236ENST00000490484 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
RBM39-236ENST00000490484 DBNLQ9UJU6 430 aaKnown RBP12.72□□□□□ -0.37
RBM39-236ENST00000490484 RCAN3Q9UKA8 241 aa12.72□□□□□ -0.37
RBM39-236ENST00000490484 EXOC6BQ9Y2D4 811 aa12.72□□□□□ -0.37
RBM39-236ENST00000490484 NOP58Q9Y2X3 529 aaKnown RBP12.72□□□□□ -0.37
RBM39-236ENST00000490484 CENPFP49454 3210 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 GPR75-ASB3A0A0A6YYF3 556 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 IRF6O14896 467 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 MS4A1P11836 297 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 GSTO1P78417 241 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 PPIL2Q13356 520 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms