RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TLL2Q9Y6L7 1015 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 AOX1Q06278 1338 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 RASSF10A6NK89 507 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 GLRX3O76003 335 aaKnown RBP13.46□□□□□ -0.25
CPSF7-212ENST00000489728 BAG3O95817 575 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 IGHDP01880 384 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 MX1P20591 662 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 BTDP43251 543 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.25
CPSF7-212ENST00000489728 NUCB1Q02818 461 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 SUPT20HL1Q3ZLR7 823 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 C2orf69Q8N8R5 385 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 IDI2Q9BXS1 227 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 GBA2Q9HCG7 927 aaPredicted RBP13.46□□□□□ -0.25
CPSF7-212ENST00000489728 STAP2Q9UGK3 403 aa13.46□□□□□ -0.25
CPSF7-212ENST00000489728 COL2A1P02458 1487 aaPredicted RBP13.46□□□□□ -0.25
CPSF7-212ENST00000489728 MYO5AQ9Y4I1 1855 aaKnown RBP13.45□□□□□ -0.26
CPSF7-212ENST00000489728 UNCXA6NJT0 531 aa13.45□□□□□ -0.26
CPSF7-212ENST00000489728 ENTPD3O75355 529 aa13.45□□□□□ -0.26
CPSF7-212ENST00000489728 IDH1O75874 414 aaKnown RBP13.45□□□□□ -0.26
CPSF7-212ENST00000489728 PPP4CP60510 307 aa13.45□□□□□ -0.26
CPSF7-212ENST00000489728 RASA3Q14644 834 aa13.45□□□□□ -0.26
CPSF7-212ENST00000489728 SAPCD2Q86UD0 394 aa13.45□□□□□ -0.26
CPSF7-212ENST00000489728 CHD1LQ86WJ1 897 aa13.45□□□□□ -0.26
CPSF7-212ENST00000489728 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
CPSF7-212ENST00000489728 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
CPSF7-212ENST00000489728 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.26
CPSF7-212ENST00000489728 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
CPSF7-212ENST00000489728 GOLIM4O00461 696 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 RHBDL3P58872 404 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 FMR1Q06787 632 aaKnown RBP eCLIP13.44□□□□□ -0.26
CPSF7-212ENST00000489728 LRRFIP1Q32MZ4 808 aaKnown RBP13.44□□□□□ -0.26
CPSF7-212ENST00000489728 ZSCAN25Q6NSZ9 544 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 PI4K2BQ8TCG2 481 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 FAM151AQ8WW52 585 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 BOLA2Q9H3K6 86 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 ANTXR1Q9H6X2 564 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 ZNF408Q9H9D4 720 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 USP40Q9NVE5 1235 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 ABT1Q9ULW3 272 aaKnown RBP13.44□□□□□ -0.26
CPSF7-212ENST00000489728 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 MYH7P12883 1935 aa13.44□□□□□ -0.26
CPSF7-212ENST00000489728 SSC5DA1L4H1 1573 aa13.43□□□□□ -0.26
CPSF7-212ENST00000489728 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
CPSF7-212ENST00000489728 PPP1R12BO60237 982 aaPredicted RBP13.43□□□□□ -0.26
CPSF7-212ENST00000489728 NEFLP07196 543 aa13.43□□□□□ -0.26
CPSF7-212ENST00000489728 MAP3K11Q16584 847 aa13.43□□□□□ -0.26
CPSF7-212ENST00000489728 TEPSINQ96N21 525 aa13.43□□□□□ -0.26
CPSF7-212ENST00000489728 BCL11AQ9H165 835 aa13.43□□□□□ -0.26
CPSF7-212ENST00000489728 FOCADQ5VW36 1801 aa13.43□□□□□ -0.26
CPSF7-212ENST00000489728 THSD7BQ9C0I4 1608 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 PDE6AP16499 860 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 CYP7A1P22680 504 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 ECE1P42892 770 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 DEFB115Q30KQ5 88 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 SLC9C2Q5TAH2 1124 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 ARMC9Q7Z3E5 817 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 MAGEB6Q8N7X4 407 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 KBTBD3Q8NAB2 608 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 KLRG1Q96E93 195 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 LNPKQ9C0E8 428 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 OSBPL3Q9H4L5 887 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 NDUFB9Q9Y6M9 179 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 ATRNL1Q5VV63 1379 aa13.42□□□□□ -0.26
CPSF7-212ENST00000489728 TCRBV5S4A2TA0A5A2 114 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-212ENST00000489728 ZFYP08048 801 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-212ENST00000489728 ADD2P35612 726 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 CACNB3P54284 484 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 PDE1AP54750 535 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 HUNKP57058 714 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 UBE3CQ15386 1083 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 ERICH6BQ5W0A0 696 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 DCAF15Q66K64 600 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 FAM198AQ9UFP1 575 aa13.41□□□□□ -0.26
CPSF7-212ENST00000489728 IREB2P48200 963 aaKnown RBP13.4□□□□□ -0.26
CPSF7-212ENST00000489728 RGS3P49796 1198 aa13.4□□□□□ -0.26
CPSF7-212ENST00000489728 NFIAQ12857 509 aa13.4□□□□□ -0.26
CPSF7-212ENST00000489728 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-212ENST00000489728 ADGRA1Q86SQ6 560 aa13.4□□□□□ -0.26
CPSF7-212ENST00000489728 TEX11Q8IYF3 940 aa13.4□□□□□ -0.26
CPSF7-212ENST00000489728 OTUD7AQ8TE49 926 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-212ENST00000489728 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
CPSF7-212ENST00000489728 SCAF8Q9UPN6 1271 aaKnown RBP13.4□□□□□ -0.26
CPSF7-212ENST00000489728 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
CPSF7-212ENST00000489728 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
CPSF7-212ENST00000489728 HTRA3P83110 453 aa13.39□□□□□ -0.27
CPSF7-212ENST00000489728 LDLRAD1Q5T700 205 aa13.39□□□□□ -0.27
CPSF7-212ENST00000489728 PRAMEF18Q5VWM3 479 aa13.39□□□□□ -0.27
CPSF7-212ENST00000489728 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
CPSF7-212ENST00000489728 RGMBQ6NW40 437 aa13.39□□□□□ -0.27
CPSF7-212ENST00000489728 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-212ENST00000489728 SH3RF3Q8TEJ3 882 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-212ENST00000489728 CCDC102AQ96A19 550 aa13.39□□□□□ -0.27
CPSF7-212ENST00000489728 EDC3Q96F86 508 aaKnown RBP13.39□□□□□ -0.27
CPSF7-212ENST00000489728 RIOK1Q9BRS2 568 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms