RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TMPRSS13Q9BYE2 586 aa7.34□□□□□ -1.23
ITGB1-214ENST00000488427 CBX8Q9HC52 389 aa7.34□□□□□ -1.23
ITGB1-214ENST00000488427 RNF112Q9ULX5 631 aa7.34□□□□□ -1.23
ITGB1-214ENST00000488427 CYP8B1Q9UNU6 501 aa7.34□□□□□ -1.23
ITGB1-214ENST00000488427 TM4SF5O14894 197 aa7.33□□□□□ -1.24
ITGB1-214ENST00000488427 DHX15O43143 795 aaKnown RBP7.33□□□□□ -1.24
ITGB1-214ENST00000488427 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-214ENST00000488427 FAAP100Q0VG06 881 aa7.33□□□□□ -1.24
ITGB1-214ENST00000488427 PWP1Q13610 501 aa7.33□□□□□ -1.24
ITGB1-214ENST00000488427 DZIP1LQ8IYY4 767 aaKnown RBP7.33□□□□□ -1.24
ITGB1-214ENST00000488427 C12orf50Q8NA57 414 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-214ENST00000488427 UTP4Q969X6 686 aaKnown RBP7.33□□□□□ -1.24
ITGB1-214ENST00000488427 WISP1O95388 367 aa7.32□□□□□ -1.24
ITGB1-214ENST00000488427 ZNF157P51786 506 aaPredicted RBP7.32□□□□□ -1.24
ITGB1-214ENST00000488427 RPS26P62854 115 aaKnown RBP7.32□□□□□ -1.24
ITGB1-214ENST00000488427 HGSNATQ68CP4 663 aa7.32□□□□□ -1.24
ITGB1-214ENST00000488427 LLGL2Q6P1M3 1020 aa7.32□□□□□ -1.24
ITGB1-214ENST00000488427 AGGF1Q8N302 714 aaeCLIP7.32□□□□□ -1.24
ITGB1-214ENST00000488427 KCNB2Q92953 911 aa7.32□□□□□ -1.24
ITGB1-214ENST00000488427 ACSBG1Q96GR2 724 aa7.32□□□□□ -1.24
ITGB1-214ENST00000488427 TRIM56Q9BRZ2 755 aaKnown RBP7.32□□□□□ -1.24
ITGB1-214ENST00000488427 NRSN2Q9GZP1 204 aa7.32□□□□□ -1.24
ITGB1-214ENST00000488427 PODXL2Q9NZ53 605 aa7.32□□□□□ -1.24
ITGB1-214ENST00000488427 GSC2O15499 205 aa7.31□□□□□ -1.24
ITGB1-214ENST00000488427 USP11P51784 963 aa7.31□□□□□ -1.24
ITGB1-214ENST00000488427 SLC51AQ86UW1 340 aa7.31□□□□□ -1.24
ITGB1-214ENST00000488427 ENC1O14682 589 aa7.3□□□□□ -1.24
ITGB1-214ENST00000488427 TRIM37O94972 964 aa7.3□□□□□ -1.24
ITGB1-214ENST00000488427 ALX3O95076 343 aa7.3□□□□□ -1.24
ITGB1-214ENST00000488427 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.3□□□□□ -1.24
ITGB1-214ENST00000488427 USP31Q70CQ4 1352 aa7.3□□□□□ -1.24
ITGB1-214ENST00000488427 NISCHQ9Y2I1 1504 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 BTBD11A6QL63 1104 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 FBXO24O75426 580 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 SOX4Q06945 474 aaPredicted RBP7.29□□□□□ -1.24
ITGB1-214ENST00000488427 AKAP4Q5JQC9 854 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 PCNX4Q63HM2 1172 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 PRR23CQ6ZRP0 262 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 GIMAP7Q8NHV1 300 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 FAM46AQ96IP4 442 aaKnown RBP7.29□□□□□ -1.24
ITGB1-214ENST00000488427 MEGF10Q96KG7 1140 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 MYRFLQ96LU7 910 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 FAM161BQ96MY7 647 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 ATXN3LQ9H3M9 355 aa7.29□□□□□ -1.24
ITGB1-214ENST00000488427 AOC2O75106 756 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 ADH5P11766 374 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 ID3Q02535 119 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 KIF4BQ2VIQ3 1234 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 MAP1SQ66K74 1059 aaPredicted RBP7.28□□□□□ -1.24
ITGB1-214ENST00000488427 TTBK2Q6IQ55 1244 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 PIDD1Q9HB75 910 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 GOLGA2P5Q9HBQ8 144 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 PCMTD2Q9NV79 361 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 AP4E1Q9UPM8 1137 aa7.28□□□□□ -1.24
ITGB1-214ENST00000488427 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.27□□□□□ -1.25
ITGB1-214ENST00000488427 TIAF1O95411 115 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 VAMP1P23763 118 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 PREPP48147 710 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 MRPL58Q14197 206 aaKnown RBP7.27□□□□□ -1.25
ITGB1-214ENST00000488427 MAP7Q14244 749 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 MCTP1Q6DN14 999 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 RELL1Q8IUW5 271 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 RGS22Q8NE09 1264 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 PICK1Q9NRD5 415 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 STOML1Q9UBI4 398 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 RAXQ9Y2V3 346 aa7.27□□□□□ -1.25
ITGB1-214ENST00000488427 CELA3AP09093 270 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 RXRBP28702 533 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 TAGLNQ01995 201 aaKnown RBP7.26□□□□□ -1.25
ITGB1-214ENST00000488427 ZNF252P-AS1Q0IIN9 211 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 PAOXQ6QHF9 649 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 HS2ST1Q7LGA3 356 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 DYMQ7RTS9 669 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 PDZD3Q86UT5 571 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 CLEC10AQ8IUN9 316 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 FAM20CQ8IXL6 584 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 WDR18Q9BV38 432 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 ZC3H12CQ9C0D7 883 aaKnown RBP7.26□□□□□ -1.25
ITGB1-214ENST00000488427 MIR1-1HGQ9H1L0 117 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 KCNF1Q9H3M0 494 aa7.26□□□□□ -1.25
ITGB1-214ENST00000488427 CCDC86Q9H6F5 360 aaKnown RBP7.26□□□□□ -1.25
ITGB1-214ENST00000488427 BMP3P12645 472 aa7.25□□□□□ -1.25
ITGB1-214ENST00000488427 LIG3P49916 1009 aa7.25□□□□□ -1.25
ITGB1-214ENST00000488427 MEI1Q5TIA1 1274 aa7.25□□□□□ -1.25
ITGB1-214ENST00000488427 CCDC84Q86UT8 332 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-214ENST00000488427 UBL7Q96S82 380 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-214ENST00000488427 METTL5Q9NRN9 209 aaKnown RBP7.25□□□□□ -1.25
ITGB1-214ENST00000488427 DLGAP3O95886 979 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 CTSHP09668 335 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 LIG1P18858 919 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 FSTP19883 344 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 BMP6P22004 513 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 MAP4P27816 1152 aaKnown RBP7.24□□□□□ -1.25
ITGB1-214ENST00000488427 ASPAP45381 313 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 ERVK-24P63145 666 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 AGMOQ6ZNB7 445 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 BEND4Q6ZU67 534 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 HDXQ7Z353 690 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 TMEM87AQ8NBN3 555 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms