RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 F8W031 263 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-242ENST00000488013 LMOD1P29536 600 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-242ENST00000488013 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
HDLBP-242ENST00000488013 DLGAP5Q15398 846 aa13.2□□□□□ -0.3
HDLBP-242ENST00000488013 DIXDC1Q155Q3 683 aa13.2□□□□□ -0.3
HDLBP-242ENST00000488013 ALX1Q15699 326 aa13.2□□□□□ -0.3
HDLBP-242ENST00000488013 AMOTL1Q8IY63 956 aa13.2□□□□□ -0.3
HDLBP-242ENST00000488013 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
HDLBP-242ENST00000488013 AATFQ9NY61 560 aaKnown RBP eCLIP13.2□□□□□ -0.3
HDLBP-242ENST00000488013 TMOD2Q9NZR1 351 aa13.2□□□□□ -0.3
HDLBP-242ENST00000488013 DAGLAQ9Y4D2 1042 aa13.2□□□□□ -0.3
HDLBP-242ENST00000488013 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
HDLBP-242ENST00000488013 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 M0R2C6 588 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 APPP05067 770 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-242ENST00000488013 BTDP43251 543 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 NT5C2P49902 561 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 GMPSP49915 693 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-242ENST00000488013 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 ZNF384Q8TF68 577 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 MAP4K1Q92918 833 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 MXD3Q9BW11 206 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 FER1L6Q2WGJ9 1857 aa13.19□□□□□ -0.3
HDLBP-242ENST00000488013 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 HSPD1P10809 573 aaKnown RBP13.18□□□□□ -0.3
HDLBP-242ENST00000488013 SCNN1DP51172 638 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 ANAPC15P60006 121 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 GRIK5Q16478 980 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 CFAP100Q494V2 611 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 FKBP1CQ5VVH2 108 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
HDLBP-242ENST00000488013 ADGRA1Q86SQ6 560 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 ZNF589Q86UQ0 364 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-242ENST00000488013 L3MBTL3Q96JM7 780 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-242ENST00000488013 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
HDLBP-242ENST00000488013 USP26Q9BXU7 913 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 LSG1Q9H089 658 aaKnown RBP13.18□□□□□ -0.3
HDLBP-242ENST00000488013 ARMT1Q9H993 441 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
HDLBP-242ENST00000488013 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
HDLBP-242ENST00000488013 ZNF541Q9H0D2 1346 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
HDLBP-242ENST00000488013 GLTPD2A6NH11 291 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
HDLBP-242ENST00000488013 USP5P45974 858 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 IMMTQ16891 758 aaKnown RBP13.17□□□□□ -0.3
HDLBP-242ENST00000488013 MICALL2Q8IY33 904 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 LCORLQ8N3X6 602 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 NAPBQ9H115 298 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 MYOZ2Q9NPC6 264 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 USP40Q9NVE5 1235 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
HDLBP-242ENST00000488013 COL4A5P29400 1685 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
HDLBP-242ENST00000488013 TDO2P48775 406 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 RHBDL3P58872 404 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 KRT32Q14532 448 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 IDI2Q9BXS1 227 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 C22orf23Q9BZE7 217 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
HDLBP-242ENST00000488013 AKAP11Q9UKA4 1901 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 ZNF213O14771 459 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 ENTPD3O75355 529 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 CHGBP05060 677 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 HSPA4P34932 840 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
HDLBP-242ENST00000488013 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
HDLBP-242ENST00000488013 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-242ENST00000488013 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-242ENST00000488013 DHX36Q9H2U1 1008 aaKnown RBP13.15□□□□□ -0.3
HDLBP-242ENST00000488013 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-242ENST00000488013 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
HDLBP-242ENST00000488013 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-242ENST00000488013 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
HDLBP-242ENST00000488013 DDNO94850 711 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-242ENST00000488013 FGAP02671 866 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 PSMA5P28066 241 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 TNNI2P48788 182 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 DYNLL1P63167 89 aaKnown RBP13.14□□□□□ -0.31
HDLBP-242ENST00000488013 NECTIN1Q15223 517 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 TSGA10IPQ3SY00 556 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 TTC6Q86TZ1 520 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 SH3RF3Q8TEJ3 882 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-242ENST00000488013 PRMT6Q96LA8 375 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-242ENST00000488013 TBC1D32Q96NH3 1257 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 IL25Q9H293 177 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 DCP1AQ9NPI6 582 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-242ENST00000488013 HACL1Q9UJ83 578 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 CACNA1SQ13698 1873 aa13.14□□□□□ -0.31
HDLBP-242ENST00000488013 WNT10BO00744 389 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms