RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ASTN2O75129 1339 aaPredicted RBP23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 ZNF532Q9HCE3 1301 aa23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 BAG3O95817 575 aa23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 BTDP43251 543 aa23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 ANGEL2Q5VTE6 544 aaKnown RBP23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 ADGRA1Q86SQ6 560 aa23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 CERS3Q8IU89 383 aa23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 DCPSQ96C86 337 aaKnown RBP23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 GGA3Q9NZ52 723 aa23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 ZNF70Q9UC06 446 aaPredicted RBP23.43■■□□□ 1.34
PCOLCE-208ENST00000487172 TRIM6-TRIM34B2RNG4 842 aa23.42■■□□□ 1.34
PCOLCE-208ENST00000487172 GSPT1P15170 499 aaKnown RBP23.42■■□□□ 1.34
PCOLCE-208ENST00000487172 FKBP1CQ5VVH2 108 aa23.42■■□□□ 1.34
PCOLCE-208ENST00000487172 CDC42EP5Q6NZY7 148 aa23.42■■□□□ 1.34
PCOLCE-208ENST00000487172 APOBEC3FQ8IUX4 373 aaKnown RBP23.42■■□□□ 1.34
PCOLCE-208ENST00000487172 SMC1BQ8NDV3 1235 aa23.42■■□□□ 1.34
PCOLCE-208ENST00000487172 NOL10Q9BSC4 688 aaKnown RBP23.42■■□□□ 1.34
PCOLCE-208ENST00000487172 FSD1Q9BTV5 496 aa23.42■■□□□ 1.34
PCOLCE-208ENST00000487172 POLR2AP24928 1970 aaKnown RBP23.41■■□□□ 1.34
PCOLCE-208ENST00000487172 RFX7Q2KHR2 1363 aa23.41■■□□□ 1.34
PCOLCE-208ENST00000487172 RNF113AO15541 343 aaKnown RBP23.41■■□□□ 1.34
PCOLCE-208ENST00000487172 USP40Q9NVE5 1235 aa23.41■■□□□ 1.34
PCOLCE-208ENST00000487172 CLRN2A0PK11 232 aa23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 PLCG2P16885 1265 aa23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 RHBDL3P58872 404 aa23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 MAP1SQ66K74 1059 aaPredicted RBP23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 CDC37L1Q7L3B6 337 aa23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 SKAP1Q86WV1 359 aa23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 RILPL2Q969X0 211 aa23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 AATFQ9NY61 560 aaKnown RBP eCLIP23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 TMOD2Q9NZR1 351 aa23.4■■□□□ 1.34
PCOLCE-208ENST00000487172 RGS3P49796 1198 aa23.39■■□□□ 1.33
PCOLCE-208ENST00000487172 FSTL1Q12841 308 aa23.39■■□□□ 1.33
PCOLCE-208ENST00000487172 APPBP2Q92624 585 aa23.39■■□□□ 1.33
PCOLCE-208ENST00000487172 AK9Q5TCS8 1911 aa23.38■■□□□ 1.33
PCOLCE-208ENST00000487172 SDSP20132 328 aa23.38■■□□□ 1.33
PCOLCE-208ENST00000487172 TNFAIP1Q13829 316 aa23.38■■□□□ 1.33
PCOLCE-208ENST00000487172 SULF1Q8IWU6 871 aa23.38■■□□□ 1.33
PCOLCE-208ENST00000487172 RIOK1Q9BRS2 568 aaKnown RBP23.38■■□□□ 1.33
PCOLCE-208ENST00000487172 IDI2Q9BXS1 227 aa23.38■■□□□ 1.33
PCOLCE-208ENST00000487172 VEZTQ9HBM0 779 aa23.38■■□□□ 1.33
PCOLCE-208ENST00000487172 GTF3C3Q9Y5Q9 886 aa23.38■■□□□ 1.33
PCOLCE-208ENST00000487172 NPM3O75607 178 aaKnown RBP23.37■■□□□ 1.33
PCOLCE-208ENST00000487172 ITGBL1O95965 494 aaPredicted RBP23.37■■□□□ 1.33
PCOLCE-208ENST00000487172 CHGBP05060 677 aa23.37■■□□□ 1.33
PCOLCE-208ENST00000487172 KRT26Q7Z3Y9 468 aa23.37■■□□□ 1.33
PCOLCE-208ENST00000487172 FAM83AQ86UY5 434 aa23.37■■□□□ 1.33
PCOLCE-208ENST00000487172 PPP2R3BQ9Y5P8 575 aa23.37■■□□□ 1.33
PCOLCE-208ENST00000487172 MAGEB6P1A0A0J9YX57 407 aa23.36■■□□□ 1.33
PCOLCE-208ENST00000487172 WDHD1O75717 1129 aaPredicted RBP23.36■■□□□ 1.33
PCOLCE-208ENST00000487172 TNNI2P48788 182 aa23.36■■□□□ 1.33
PCOLCE-208ENST00000487172 DYNLL1P63167 89 aaKnown RBP23.36■■□□□ 1.33
PCOLCE-208ENST00000487172 SLFNL1Q499Z3 407 aa23.36■■□□□ 1.33
PCOLCE-208ENST00000487172 ZMYM1Q5SVZ6 1142 aa23.36■■□□□ 1.33
PCOLCE-208ENST00000487172 USP48Q86UV5 1035 aa23.36■■□□□ 1.33
PCOLCE-208ENST00000487172 MIGA1Q8NAN2 632 aa23.36■■□□□ 1.33
PCOLCE-208ENST00000487172 HIP1O00291 1037 aa23.35■■□□□ 1.33
PCOLCE-208ENST00000487172 BMP2KLQ5H9B9 411 aa23.35■■□□□ 1.33
PCOLCE-208ENST00000487172 SH3RF3Q8TEJ3 882 aaPredicted RBP23.35■■□□□ 1.33
PCOLCE-208ENST00000487172 GLIS2Q9BZE0 524 aaPredicted RBP23.35■■□□□ 1.33
PCOLCE-208ENST00000487172 PUS7LQ9H0K6 701 aaKnown RBP23.35■■□□□ 1.33
PCOLCE-208ENST00000487172 DEFB129Q9H1M3 183 aa23.35■■□□□ 1.33
PCOLCE-208ENST00000487172 TCP10L2B9ZVM9 353 aa23.34■■□□□ 1.33
PCOLCE-208ENST00000487172 ENTPD3O75355 529 aa23.34■■□□□ 1.33
PCOLCE-208ENST00000487172 CACNB3P54284 484 aa23.34■■□□□ 1.33
PCOLCE-208ENST00000487172 TEX11Q8IYF3 940 aa23.34■■□□□ 1.33
PCOLCE-208ENST00000487172 OSBP2Q969R2 916 aa23.34■■□□□ 1.33
PCOLCE-208ENST00000487172 FAM198AQ9UFP1 575 aa23.34■■□□□ 1.33
PCOLCE-208ENST00000487172 CNTNAP1P78357 1384 aa23.33■■□□□ 1.33
PCOLCE-208ENST00000487172 ADM5C9JUS6 153 aa23.33■■□□□ 1.33
PCOLCE-208ENST00000487172 NFIAQ12857 509 aa23.33■■□□□ 1.33
PCOLCE-208ENST00000487172 RASA3Q14644 834 aa23.33■■□□□ 1.33
PCOLCE-208ENST00000487172 FAM151AQ8WW52 585 aa23.33■■□□□ 1.33
PCOLCE-208ENST00000487172 HELLSQ9NRZ9 838 aa23.33■■□□□ 1.33
PCOLCE-208ENST00000487172 LCORLQ8N3X6 602 aa23.32■■□□□ 1.32
PCOLCE-208ENST00000487172 AIDAQ96BJ3 306 aa23.32■■□□□ 1.32
PCOLCE-208ENST00000487172 SCAF8Q9UPN6 1271 aaKnown RBP23.32■■□□□ 1.32
PCOLCE-208ENST00000487172 CDK5RAP2Q96SN8 1893 aa23.32■■□□□ 1.32
PCOLCE-208ENST00000487172 PASKQ96RG2 1323 aa23.32■■□□□ 1.32
PCOLCE-208ENST00000487172 FOCADQ5VW36 1801 aa23.31■■□□□ 1.32
PCOLCE-208ENST00000487172 MBD4O95243 580 aa23.31■■□□□ 1.32
PCOLCE-208ENST00000487172 CRNKL1Q9BZJ0 848 aaKnown RBP23.31■■□□□ 1.32
PCOLCE-208ENST00000487172 ARMT1Q9H993 441 aa23.31■■□□□ 1.32
PCOLCE-208ENST00000487172 DDX4Q9NQI0 724 aaKnown RBP23.31■■□□□ 1.32
PCOLCE-208ENST00000487172 RPAP1Q9BWH6 1393 aaPredicted RBP23.3■■□□□ 1.32
PCOLCE-208ENST00000487172 M0R2C6 588 aa23.3■■□□□ 1.32
PCOLCE-208ENST00000487172 TGFBRAP1Q8WUH2 860 aa23.3■■□□□ 1.32
PCOLCE-208ENST00000487172 TEPSINQ96N21 525 aa23.3■■□□□ 1.32
PCOLCE-208ENST00000487172 STRBPQ96SI9 672 aaKnown RBP23.3■■□□□ 1.32
PCOLCE-208ENST00000487172 SEC62Q99442 399 aaKnown RBP23.3■■□□□ 1.32
PCOLCE-208ENST00000487172 TRAF5O00463 557 aa23.29■■□□□ 1.32
PCOLCE-208ENST00000487172 GPAA1O43292 621 aa23.29■■□□□ 1.32
PCOLCE-208ENST00000487172 NMIQ13287 307 aaPredicted RBP23.29■■□□□ 1.32
PCOLCE-208ENST00000487172 MCMDC2Q4G0Z9 681 aa23.29■■□□□ 1.32
PCOLCE-208ENST00000487172 CDCA5Q96FF9 252 aa23.29■■□□□ 1.32
PCOLCE-208ENST00000487172 A0A0D9SFI3 127 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 GNAT2P19087 354 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 USP5P45974 858 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 TCP10Q12799 353 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 PICALMQ13492 652 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms