RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 ZSCAN30Q86W11 494 aa6.71□□□□□ -1.34
SF1-217ENST00000486960 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
SF1-217ENST00000486960 FLAD1Q8NFF5 587 aa6.71□□□□□ -1.34
SF1-217ENST00000486960 C1orf216Q8TAB5 229 aa6.71□□□□□ -1.34
SF1-217ENST00000486960 RNPC3Q96LT9 517 aaKnown RBP6.71□□□□□ -1.34
SF1-217ENST00000486960 MYCBPQ99417 103 aaPredicted RBP6.71□□□□□ -1.34
SF1-217ENST00000486960 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.71□□□□□ -1.34
SF1-217ENST00000486960 ARNT2Q9HBZ2 717 aa6.71□□□□□ -1.34
SF1-217ENST00000486960 GPHNQ9NQX3 736 aaPredicted RBP6.71□□□□□ -1.34
SF1-217ENST00000486960 CWC25Q9NXE8 425 aaPredicted RBP6.71□□□□□ -1.34
SF1-217ENST00000486960 SYNPO2Q9UMS6 1093 aa6.71□□□□□ -1.34
SF1-217ENST00000486960 PPP1R3GB7ZBB8 358 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 TNFRSF10BO14763 440 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 SORBS3O60504 671 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 HIP1RO75146 1068 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 NR1I2O75469 434 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 BPNT1O95861 308 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 FAM163BP0C2L3 166 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 CT47B1P0C2W7 299 aaPredicted RBP6.7□□□□□ -1.34
SF1-217ENST00000486960 HLTFQ14527 1009 aaKnown RBP eCLIP6.7□□□□□ -1.34
SF1-217ENST00000486960 CDC37Q16543 378 aaPredicted RBP6.7□□□□□ -1.34
SF1-217ENST00000486960 NBPF6Q5VWK0 638 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 SYTL4Q96C24 671 aaPredicted RBP6.7□□□□□ -1.34
SF1-217ENST00000486960 NBPF4Q96M43 638 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 ZNF700Q9H0M5 742 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 PARP2Q9UGN5 583 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 STXBP5LQ9Y2K9 1186 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 TLL2Q9Y6L7 1015 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 USP34Q70CQ2 3546 aa6.7□□□□□ -1.34
SF1-217ENST00000486960 SETXQ7Z333 2677 aaKnown RBP6.7□□□□□ -1.34
SF1-217ENST00000486960 CPSF1Q10570 1443 aaKnown RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L15C9J2P7 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L10C9JJH3 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L13C9JLJ4 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L12C9JPN9 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L11C9JVI0 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L21D6R901 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L18D6R9N7 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L22D6RA61 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L17D6RBQ6 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L19D6RCP7 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L20D6RJB6 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 TRAF5O00463 557 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 SPTLC1O15269 473 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 CDC45O75419 566 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 P4HBP07237 508 aaKnown RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 PDE6BP35913 854 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 CHMP4BP1P59074 171 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 IRX5P78411 483 aaPredicted RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 EXOSC10Q01780 885 aaKnown RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 USP17L24Q0WX57 530 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 MAP3K12Q12852 859 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 ZNF211Q13398 564 aaPredicted RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 CCDC92Q53HC0 331 aaPredicted RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 ARSHQ5FYA8 562 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 RPAINQ86UA6 219 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 COL26A1Q96A83 441 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.69□□□□□ -1.34
SF1-217ENST00000486960 SRRTQ9BXP5 876 aaKnown RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 AS3MTQ9HBK9 375 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 VTI1BQ9UEU0 232 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 ISY1Q9ULR0 285 aaKnown RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 CHD8Q9HCK8 2581 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 C5orf42Q9H799 3197 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 KMT2BQ9UMN6 2715 aaPredicted RBP6.69□□□□□ -1.34
SF1-217ENST00000486960 CCDC7Q96M83 1385 aa6.69□□□□□ -1.34
SF1-217ENST00000486960 DYTNA2CJ06 578 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 C21orf2O43822 256 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 NDUFV2P19404 249 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 CDC27P30260 824 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 SCNN1AP37088 669 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 TMEM95Q3KNT9 176 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 CCDC70Q6NSX1 233 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 HDGFL2Q7Z4V5 671 aaPredicted RBP6.68□□□□□ -1.34
SF1-217ENST00000486960 ZNF654Q8IZM8 581 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 RSPH1Q8WYR4 309 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 FAM161BQ96MY7 647 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 PRAM1Q96QH2 718 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 MUC3BQ9H195 1237 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 RETREG1Q9H6L5 497 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 ANO2Q9NQ90 1003 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 ZNF69Q9UC07 566 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 CHMP3Q9Y3E7 222 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 ROCK1Q13464 1354 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 RAB3GAP2Q9H2M9 1393 aa6.68□□□□□ -1.34
SF1-217ENST00000486960 CFAP47Q6ZTR5 3102 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 RGPD2P0DJD1 1756 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 TMEM265A0A087WTH1 108 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 GPR37L1O60883 481 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 LILRB3O75022 631 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 MYL3P08590 195 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 EN2P19622 333 aaPredicted RBP6.67□□□□□ -1.34
SF1-217ENST00000486960 CTHP32929 405 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 NEXNQ0ZGT2 675 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 QPCTQ16769 361 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 SLFNL1Q499Z3 407 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 C10orf62Q5T681 223 aaPredicted RBP6.67□□□□□ -1.34
SF1-217ENST00000486960 DPY19L2Q6NUT2 758 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 TMC4Q7Z404 712 aa6.67□□□□□ -1.34
SF1-217ENST00000486960 ABTB2Q8N961 1025 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms