RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 DBNDD2Q9BQY9 259 aa15.88■□□□□ 0.13
HDAC1-209ENST00000484305 RNF186Q9NXI6 227 aa15.88■□□□□ 0.13
HDAC1-209ENST00000484305 EXOC6BQ9Y2D4 811 aa15.88■□□□□ 0.13
HDAC1-209ENST00000484305 AK9Q5TCS8 1911 aa15.88■□□□□ 0.13
HDAC1-209ENST00000484305 TRPA1O75762 1119 aa15.87■□□□□ 0.13
HDAC1-209ENST00000484305 IREB2P48200 963 aaKnown RBP15.87■□□□□ 0.13
HDAC1-209ENST00000484305 SPTY2D1Q68D10 685 aaPredicted RBP15.87■□□□□ 0.13
HDAC1-209ENST00000484305 TBC1D9Q6ZT07 1266 aa15.87■□□□□ 0.13
HDAC1-209ENST00000484305 FAM83AQ86UY5 434 aa15.87■□□□□ 0.13
HDAC1-209ENST00000484305 DZIP1Q86YF9 867 aaKnown RBP15.87■□□□□ 0.13
HDAC1-209ENST00000484305 MYO5AQ9Y4I1 1855 aaKnown RBP15.86■□□□□ 0.13
HDAC1-209ENST00000484305 UQCRFS1P1P0C7P4 283 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 MECOMQ03112 1051 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 PDE3AQ14432 1141 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 SPRYD7Q5W111 196 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 SIRT2Q8IXJ6 389 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 RPAP2Q8IXW5 612 aaPredicted RBP15.86■□□□□ 0.13
HDAC1-209ENST00000484305 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
HDAC1-209ENST00000484305 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.86■□□□□ 0.13
HDAC1-209ENST00000484305 ZNF384Q8TF68 577 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 EAF2Q96CJ1 260 aaPredicted RBP15.86■□□□□ 0.13
HDAC1-209ENST00000484305 USP40Q9NVE5 1235 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
HDAC1-209ENST00000484305 GAKO14976 1311 aa15.86■□□□□ 0.13
HDAC1-209ENST00000484305 UNCXA6NJT0 531 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 TCP10Q12799 353 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 NFIAQ12857 509 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 CCDC158Q5M9N0 1113 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 TTC39AQ5SRH9 613 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 ANKRD13AQ8IZ07 590 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 CCDC8Q9H0W5 538 aaPredicted RBP15.85■□□□□ 0.13
HDAC1-209ENST00000484305 SNRKQ9NRH2 765 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 SAGE1Q9NXZ1 904 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 DBNLQ9UJU6 430 aaKnown RBP15.85■□□□□ 0.13
HDAC1-209ENST00000484305 LAMB1P07942 1786 aa15.85■□□□□ 0.13
HDAC1-209ENST00000484305 TM4SF4P48230 202 aa15.84■□□□□ 0.13
HDAC1-209ENST00000484305 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.84■□□□□ 0.13
HDAC1-209ENST00000484305 ERC1Q8IUD2 1116 aa15.84■□□□□ 0.13
HDAC1-209ENST00000484305 FAM151AQ8WW52 585 aa15.84■□□□□ 0.13
HDAC1-209ENST00000484305 FAM163AQ96GL9 167 aaPredicted RBP15.84■□□□□ 0.13
HDAC1-209ENST00000484305 WNK4Q96J92 1243 aa15.84■□□□□ 0.13
HDAC1-209ENST00000484305 YTHDC1Q96MU7 727 aaKnown RBP15.84■□□□□ 0.13
HDAC1-209ENST00000484305 CHMP4BQ9H444 224 aaKnown RBP15.84■□□□□ 0.13
HDAC1-209ENST00000484305 FAM198AQ9UFP1 575 aa15.84■□□□□ 0.13
HDAC1-209ENST00000484305 RPAP1Q9BWH6 1393 aaPredicted RBP15.84■□□□□ 0.13
HDAC1-209ENST00000484305 GJA5P36382 358 aa15.83■□□□□ 0.12
HDAC1-209ENST00000484305 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
HDAC1-209ENST00000484305 SLF2Q8IX21 1173 aa15.83■□□□□ 0.12
HDAC1-209ENST00000484305 RHPN1Q8TCX5 695 aa15.83■□□□□ 0.12
HDAC1-209ENST00000484305 NSUN4Q96CB9 384 aaKnown RBP15.83■□□□□ 0.12
HDAC1-209ENST00000484305 ZNF512BQ96KM6 892 aaPredicted RBP15.83■□□□□ 0.12
HDAC1-209ENST00000484305 ELP3Q9H9T3 547 aa15.83■□□□□ 0.12
HDAC1-209ENST00000484305 RAI14Q9P0K7 980 aa15.83■□□□□ 0.12
HDAC1-209ENST00000484305 MROH7-TTC4A0A0A0MT08 1334 aa15.83■□□□□ 0.12
HDAC1-209ENST00000484305 HMMRO75330 724 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 ZBTB48P10074 688 aaPredicted RBP15.82■□□□□ 0.12
HDAC1-209ENST00000484305 BTDP43251 543 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 MAP3K9P80192 1104 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 SREBF2Q12772 1141 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 VGLL4Q14135 290 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 HSP90AB4PQ58FF6 505 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 MIGA2Q7L4E1 593 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.12
HDAC1-209ENST00000484305 IL1RAPL2Q9NP60 686 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 LRP2BPQ9P2M1 347 aa15.82■□□□□ 0.12
HDAC1-209ENST00000484305 GPR75-ASB3A0A0A6YYF3 556 aa15.81■□□□□ 0.12
HDAC1-209ENST00000484305 APBB1O00213 710 aa15.81■□□□□ 0.12
HDAC1-209ENST00000484305 CYP2E1P05181 493 aaPredicted RBP15.81■□□□□ 0.12
HDAC1-209ENST00000484305 RGS3P49796 1198 aa15.81■□□□□ 0.12
HDAC1-209ENST00000484305 AACSQ86V21 672 aa15.81■□□□□ 0.12
HDAC1-209ENST00000484305 CNKSR2Q8WXI2 1034 aa15.81■□□□□ 0.12
HDAC1-209ENST00000484305 OPTNQ96CV9 577 aa15.81■□□□□ 0.12
HDAC1-209ENST00000484305 HOOK2Q96ED9 719 aa15.81■□□□□ 0.12
HDAC1-209ENST00000484305 IDI2Q9BXS1 227 aa15.81■□□□□ 0.12
HDAC1-209ENST00000484305 DOCK2Q92608 1830 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 MAST2Q6P0Q8 1798 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 RFX7Q2KHR2 1363 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 MANSC4A6NHS7 340 aaPredicted RBP15.8■□□□□ 0.12
HDAC1-209ENST00000484305 WDHD1O75717 1129 aaPredicted RBP15.8■□□□□ 0.12
HDAC1-209ENST00000484305 TBC1D8O95759 1140 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 LDHCP07864 332 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 ZAP70P43403 619 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 RHBDL3P58872 404 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 GSTO1P78417 241 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 DCAF15Q66K64 600 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 WRNIP1Q96S55 665 aa15.8■□□□□ 0.12
HDAC1-209ENST00000484305 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
HDAC1-209ENST00000484305 ENTPD3O75355 529 aa15.79■□□□□ 0.12
HDAC1-209ENST00000484305 CAPN15O75808 1086 aa15.79■□□□□ 0.12
HDAC1-209ENST00000484305 ZKSCAN4Q969J2 545 aaPredicted RBP15.79■□□□□ 0.12
HDAC1-209ENST00000484305 KIF1BPQ96EK5 621 aa15.79■□□□□ 0.12
HDAC1-209ENST00000484305 ZNF341Q9BYN7 854 aa15.79■□□□□ 0.12
HDAC1-209ENST00000484305 PIH1D3Q9NQM4 214 aaKnown RBP15.79■□□□□ 0.12
HDAC1-209ENST00000484305 CSADQ9Y600 493 aa15.79■□□□□ 0.12
HDAC1-209ENST00000484305 SNCAIPQ9Y6H5 919 aa15.79■□□□□ 0.12
HDAC1-209ENST00000484305 NDUFB9Q9Y6M9 179 aa15.79■□□□□ 0.12
HDAC1-209ENST00000484305 INHBEP58166 350 aa15.78■□□□□ 0.12
HDAC1-209ENST00000484305 PICALMQ13492 652 aa15.78■□□□□ 0.12
HDAC1-209ENST00000484305 SH3BP5LQ7L8J4 393 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms