RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 LDHCP07864 332 aa19.38■□□□□ 0.69
UPF3A-208ENST00000484246 TNNI2P48788 182 aa19.38■□□□□ 0.69
UPF3A-208ENST00000484246 RASA3Q14644 834 aa19.38■□□□□ 0.69
UPF3A-208ENST00000484246 CDC42EP5Q6NZY7 148 aa19.38■□□□□ 0.69
UPF3A-208ENST00000484246 ZNF408Q9H9D4 720 aa19.38■□□□□ 0.69
UPF3A-208ENST00000484246 PIH1D3Q9NQM4 214 aaKnown RBP19.38■□□□□ 0.69
UPF3A-208ENST00000484246 LRP2BPQ9P2M1 347 aa19.38■□□□□ 0.69
UPF3A-208ENST00000484246 ABT1Q9ULW3 272 aaKnown RBP19.38■□□□□ 0.69
UPF3A-208ENST00000484246 NF2P35240 595 aa19.37■□□□□ 0.69
UPF3A-208ENST00000484246 C2orf69Q8N8R5 385 aa19.37■□□□□ 0.69
UPF3A-208ENST00000484246 JMYQ8N9B5 988 aa19.37■□□□□ 0.69
UPF3A-208ENST00000484246 TEPSINQ96N21 525 aa19.37■□□□□ 0.69
UPF3A-208ENST00000484246 RWDD1Q9H446 243 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-208ENST00000484246 ECHDC1Q9NTX5 307 aa19.37■□□□□ 0.69
UPF3A-208ENST00000484246 RAI14Q9P0K7 980 aa19.37■□□□□ 0.69
UPF3A-208ENST00000484246 SCAF8Q9UPN6 1271 aaKnown RBP19.37■□□□□ 0.69
UPF3A-208ENST00000484246 TTF1Q15361 905 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-208ENST00000484246 HAUS7Q99871 368 aa19.36■□□□□ 0.69
UPF3A-208ENST00000484246 IDI2Q9BXS1 227 aa19.36■□□□□ 0.69
UPF3A-208ENST00000484246 SALL3Q9BXA9 1300 aa19.35■□□□□ 0.69
UPF3A-208ENST00000484246 BTDP43251 543 aa19.35■□□□□ 0.69
UPF3A-208ENST00000484246 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
UPF3A-208ENST00000484246 MAP3K11Q16584 847 aa19.35■□□□□ 0.69
UPF3A-208ENST00000484246 DEFB115Q30KQ5 88 aa19.35■□□□□ 0.69
UPF3A-208ENST00000484246 SUPT20HL1Q3ZLR7 823 aa19.35■□□□□ 0.69
UPF3A-208ENST00000484246 NAA16Q6N069 864 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-208ENST00000484246 GPATCH3Q96I76 525 aa19.35■□□□□ 0.69
UPF3A-208ENST00000484246 TTC41PQ6P2S7 1318 aa19.34■□□□□ 0.69
UPF3A-208ENST00000484246 THSD7BQ9C0I4 1608 aa19.34■□□□□ 0.69
UPF3A-208ENST00000484246 TCP10L2B9ZVM9 353 aa19.34■□□□□ 0.69
UPF3A-208ENST00000484246 RHBDL3P58872 404 aa19.34■□□□□ 0.69
UPF3A-208ENST00000484246 PPP4CP60510 307 aa19.34■□□□□ 0.69
UPF3A-208ENST00000484246 PRAMEF18Q5VWM3 479 aa19.34■□□□□ 0.69
UPF3A-208ENST00000484246 ANTXR1Q9H6X2 564 aa19.34■□□□□ 0.69
UPF3A-208ENST00000484246 USP40Q9NVE5 1235 aa19.34■□□□□ 0.69
UPF3A-208ENST00000484246 UNCXA6NJT0 531 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 ENTPD3O75355 529 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 WDHD1O75717 1129 aaPredicted RBP19.33■□□□□ 0.68
UPF3A-208ENST00000484246 ECE1P42892 770 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 CACNB3P54284 484 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 HUNKP57058 714 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 MAP3K12Q12852 859 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 CERS3Q8IU89 383 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 FAM151AQ8WW52 585 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 FAM198AQ9UFP1 575 aa19.33■□□□□ 0.68
UPF3A-208ENST00000484246 MKRN1Q9UHC7 482 aaKnown RBP19.33■□□□□ 0.68
UPF3A-208ENST00000484246 COL2A1P02458 1487 aaPredicted RBP19.33■□□□□ 0.68
UPF3A-208ENST00000484246 IDH1O75874 414 aaKnown RBP19.32■□□□□ 0.68
UPF3A-208ENST00000484246 IGHDP01880 384 aa19.32■□□□□ 0.68
UPF3A-208ENST00000484246 NFIAQ12857 509 aa19.32■□□□□ 0.68
UPF3A-208ENST00000484246 NBPF12Q5TAG4 269 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-208ENST00000484246 TMEM39BQ9GZU3 492 aa19.32■□□□□ 0.68
UPF3A-208ENST00000484246 BOLA2Q9H3K6 86 aa19.32■□□□□ 0.68
UPF3A-208ENST00000484246 NDUFB9Q9Y6M9 179 aa19.32■□□□□ 0.68
UPF3A-208ENST00000484246 DOCK2Q92608 1830 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 GOLIM4O00461 696 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 PLCG2P16885 1265 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 VEGFBP49765 207 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 LDLRAD1Q5T700 205 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 ARMC9Q7Z3E5 817 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 CDAN1Q8IWY9 1227 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 HOOK2Q96ED9 719 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 DNAJC2Q99543 621 aaKnown RBP19.31■□□□□ 0.68
UPF3A-208ENST00000484246 PAG1Q9NWQ8 432 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 ATRNL1Q5VV63 1379 aa19.31■□□□□ 0.68
UPF3A-208ENST00000484246 PPP1R12BO60237 982 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-208ENST00000484246 BAG3O95817 575 aa19.3■□□□□ 0.68
UPF3A-208ENST00000484246 IRX6P78412 446 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-208ENST00000484246 COL13A1Q5TAT6 717 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-208ENST00000484246 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
UPF3A-208ENST00000484246 RGMBQ6NW40 437 aa19.3■□□□□ 0.68
UPF3A-208ENST00000484246 ADGRA1Q86SQ6 560 aa19.3■□□□□ 0.68
UPF3A-208ENST00000484246 PI4K2BQ8TCG2 481 aa19.3■□□□□ 0.68
UPF3A-208ENST00000484246 CAPNS2Q96L46 248 aa19.3■□□□□ 0.68
UPF3A-208ENST00000484246 STAP2Q9UGK3 403 aa19.3■□□□□ 0.68
UPF3A-208ENST00000484246 POLR2AP24928 1970 aaKnown RBP19.3■□□□□ 0.68
UPF3A-208ENST00000484246 WDR33Q9C0J8 1336 aaKnown RBP19.29■□□□□ 0.68
UPF3A-208ENST00000484246 GLRX3O76003 335 aaKnown RBP19.29■□□□□ 0.68
UPF3A-208ENST00000484246 MX1P20591 662 aa19.29■□□□□ 0.68
UPF3A-208ENST00000484246 CYP7A1P22680 504 aa19.29■□□□□ 0.68
UPF3A-208ENST00000484246 RGS3P49796 1198 aa19.29■□□□□ 0.68
UPF3A-208ENST00000484246 MAGEB6Q8N7X4 407 aa19.29■□□□□ 0.68
UPF3A-208ENST00000484246 NOL10Q9BSC4 688 aaKnown RBP19.29■□□□□ 0.68
UPF3A-208ENST00000484246 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
UPF3A-208ENST00000484246 MYH2Q9UKX2 1941 aa19.28■□□□□ 0.68
UPF3A-208ENST00000484246 ERC2O15083 957 aa19.28■□□□□ 0.68
UPF3A-208ENST00000484246 SLC10A3P09131 477 aa19.28■□□□□ 0.68
UPF3A-208ENST00000484246 PDE6AP16499 860 aa19.28■□□□□ 0.68
UPF3A-208ENST00000484246 NUCB1Q02818 461 aa19.28■□□□□ 0.68
UPF3A-208ENST00000484246 CYP4F22Q6NT55 531 aa19.28■□□□□ 0.68
UPF3A-208ENST00000484246 MOB2Q70IA6 237 aa19.28■□□□□ 0.68
UPF3A-208ENST00000484246 OTUD7AQ8TE49 926 aaPredicted RBP19.28■□□□□ 0.68
UPF3A-208ENST00000484246 CCDC102AQ96A19 550 aa19.28■□□□□ 0.68
UPF3A-208ENST00000484246 EDC3Q96F86 508 aaKnown RBP19.28■□□□□ 0.68
UPF3A-208ENST00000484246 TCRBV5S4A2TA0A5A2 114 aa19.27■□□□□ 0.68
UPF3A-208ENST00000484246 FAM155AB1AL88 458 aaPredicted RBP19.27■□□□□ 0.68
UPF3A-208ENST00000484246 MAP2K2P36507 400 aa19.27■□□□□ 0.68
UPF3A-208ENST00000484246 NOGQ13253 232 aa19.27■□□□□ 0.68
UPF3A-208ENST00000484246 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.27■□□□□ 0.68
UPF3A-208ENST00000484246 BCL11AQ9H165 835 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms