RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	NBPF9	Q3BBW0	867 aa		33.28	■■■□□ 2.92
TPRA1-208	ENST00000483868	LCORL	Q8N3X6	602 aa		33.28	■■■□□ 2.92
TPRA1-208	ENST00000483868	ARMT1	Q9H993	441 aa		33.28	■■■□□ 2.92
TPRA1-208	ENST00000483868	HELLS	Q9NRZ9	838 aa		33.28	■■■□□ 2.92
TPRA1-208	ENST00000483868	WDR90	Q96KV7	1748 aa		33.27	■■■□□ 2.92
TPRA1-208	ENST00000483868	MAGEB6P1	A0A0J9YX57	407 aa		33.27	■■■□□ 2.92
TPRA1-208	ENST00000483868	WNT10B	O00744	389 aa		33.27	■■■□□ 2.92
TPRA1-208	ENST00000483868	HIRA	P54198	1017 aa	Predicted RBP	33.27	■■■□□ 2.92
TPRA1-208	ENST00000483868	KIF4B	Q2VIQ3	1234 aa		33.27	■■■□□ 2.92
TPRA1-208	ENST00000483868	TMED8	Q6PL24	325 aa	Predicted RBP	33.27	■■■□□ 2.92
TPRA1-208	ENST00000483868	MTMR14	Q8NCE2	650 aa		33.27	■■■□□ 2.92
TPRA1-208	ENST00000483868	ASTN2	O75129	1339 aa	Predicted RBP	33.26	■■■□□ 2.92
TPRA1-208	ENST00000483868	RHBDL3	P58872	404 aa		33.26	■■■□□ 2.92
TPRA1-208	ENST00000483868	MCMDC2	Q4G0Z9	681 aa		33.26	■■■□□ 2.92
TPRA1-208	ENST00000483868	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	33.26	■■■□□ 2.92
TPRA1-208	ENST00000483868	TDRD3	Q9H7E2	651 aa	Known RBP	33.26	■■■□□ 2.92
TPRA1-208	ENST00000483868	HACL1	Q9UJ83	578 aa		33.26	■■■□□ 2.92
TPRA1-208	ENST00000483868	GPAA1	O43292	621 aa		33.25	■■■□□ 2.91
TPRA1-208	ENST00000483868	PPP4C	P60510	307 aa		33.25	■■■□□ 2.91
TPRA1-208	ENST00000483868	CDC42EP5	Q6NZY7	148 aa		33.25	■■■□□ 2.91
TPRA1-208	ENST00000483868	AIDA	Q96BJ3	306 aa		33.25	■■■□□ 2.91
TPRA1-208	ENST00000483868	MMP14	P50281	582 aa		33.24	■■■□□ 2.91
TPRA1-208	ENST00000483868	STRBP	Q96SI9	672 aa	Known RBP	33.24	■■■□□ 2.91
TPRA1-208	ENST00000483868	ESYT1	Q9BSJ8	1104 aa		33.24	■■■□□ 2.91
TPRA1-208	ENST00000483868	RRAGC	Q9HB90	399 aa		33.24	■■■□□ 2.91
TPRA1-208	ENST00000483868	ADARB2	Q9NS39	739 aa	Known RBP	33.24	■■■□□ 2.91
TPRA1-208	ENST00000483868	C8orf34	Q49A92	452 aa		33.23	■■■□□ 2.91
TPRA1-208	ENST00000483868	USP40	Q9NVE5	1235 aa		33.23	■■■□□ 2.91
TPRA1-208	ENST00000483868	SGSM2	O43147	1006 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	PRKAB2	O43741	272 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	BAG3	O95817	575 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	EPHX2	P34913	555 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	CACNB3	P54284	484 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	NMRK2	Q9NPI5	230 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	SCN4A	P35499	1836 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	CLRN2	A0PK11	232 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	VPS53	Q5VIR6	699 aa		33.22	■■■□□ 2.91
TPRA1-208	ENST00000483868	NOL10	Q9BSC4	688 aa	Known RBP	33.21	■■■□□ 2.91
TPRA1-208	ENST00000483868	RUFY2	Q8WXA3	655 aa		33.2	■■■□□ 2.91
TPRA1-208	ENST00000483868	SCAF8	Q9UPN6	1271 aa	Known RBP	33.2	■■■□□ 2.91
TPRA1-208	ENST00000483868	FOXP2	O15409	715 aa		33.19	■■■□□ 2.9
TPRA1-208	ENST00000483868	CASC1	Q6TDU7	716 aa		33.19	■■■□□ 2.9
TPRA1-208	ENST00000483868	CCDC171	Q6TFL3	1326 aa		33.19	■■■□□ 2.9
TPRA1-208	ENST00000483868	IQCA1L	A6NCM1	817 aa		33.19	■■■□□ 2.9
TPRA1-208	ENST00000483868	NFIA	Q12857	509 aa		33.19	■■■□□ 2.9
TPRA1-208	ENST00000483868	SDR42E1	Q8WUS8	393 aa		33.19	■■■□□ 2.9
TPRA1-208	ENST00000483868	ZNF70	Q9UC06	446 aa	Predicted RBP	33.19	■■■□□ 2.9
TPRA1-208	ENST00000483868	WDHD1	O75717	1129 aa	Predicted RBP	33.18	■■■□□ 2.9
TPRA1-208	ENST00000483868	TEX11	Q8IYF3	940 aa		33.18	■■■□□ 2.9
TPRA1-208	ENST00000483868	SPDYE2	Q495Y8	402 aa		33.17	■■■□□ 2.9
TPRA1-208	ENST00000483868	RAD50	Q92878	1312 aa		33.17	■■■□□ 2.9
TPRA1-208	ENST00000483868	DDX4	Q9NQI0	724 aa	Known RBP	33.17	■■■□□ 2.9
TPRA1-208	ENST00000483868	TGFBRAP1	Q8WUH2	860 aa		33.16	■■■□□ 2.9
TPRA1-208	ENST00000483868	SLC4A4	Q9Y6R1	1079 aa		33.16	■■■□□ 2.9
TPRA1-208	ENST00000483868	CDK5RAP2	Q96SN8	1893 aa		33.16	■■■□□ 2.9
TPRA1-208	ENST00000483868	VEGFA	P15692	232 aa	Predicted RBP	33.16	■■■□□ 2.9
TPRA1-208	ENST00000483868	ECM29	Q5VYK3	1845 aa		33.16	■■■□□ 2.9
TPRA1-208	ENST00000483868	SEC24B	O95487	1268 aa		33.15	■■■□□ 2.9
TPRA1-208	ENST00000483868	POTEI	P0CG38	1075 aa		33.15	■■■□□ 2.9
TPRA1-208	ENST00000483868	POTEJ	P0CG39	1038 aa		33.15	■■■□□ 2.9
TPRA1-208	ENST00000483868	PLCG2	P16885	1265 aa		33.15	■■■□□ 2.9
TPRA1-208	ENST00000483868	GSG1L2	A8MUP6	293 aa		33.14	■■■□□ 2.9
TPRA1-208	ENST00000483868	PTH1R	Q03431	593 aa		33.14	■■■□□ 2.9
TPRA1-208	ENST00000483868	EAPP	Q56P03	285 aa	Predicted RBP	33.14	■■■□□ 2.9
TPRA1-208	ENST00000483868	USP50	Q70EL3	339 aa	Predicted RBP	33.14	■■■□□ 2.9
TPRA1-208	ENST00000483868	CRNKL1	Q9BZJ0	848 aa	Known RBP	33.14	■■■□□ 2.9
TPRA1-208	ENST00000483868	VEZT	Q9HBM0	779 aa		33.14	■■■□□ 2.9
TPRA1-208	ENST00000483868	HSPD1	P10809	573 aa	Known RBP	33.14	■■■□□ 2.89
TPRA1-208	ENST00000483868	MAPKAPK5	Q8IW41	473 aa		33.14	■■■□□ 2.89
TPRA1-208	ENST00000483868	FAM198A	Q9UFP1	575 aa		33.14	■■■□□ 2.89
TPRA1-208	ENST00000483868	TCP10L2	B9ZVM9	353 aa		33.13	■■■□□ 2.89
TPRA1-208	ENST00000483868	MYO1B	O43795	1136 aa		33.13	■■■□□ 2.89
TPRA1-208	ENST00000483868	PICALM	Q13492	652 aa		33.13	■■■□□ 2.89
TPRA1-208	ENST00000483868	ANGEL2	Q5VTE6	544 aa	Known RBP	33.13	■■■□□ 2.89
TPRA1-208	ENST00000483868	ZFPM1	Q8IX07	1006 aa		33.13	■■■□□ 2.89
TPRA1-208	ENST00000483868	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	33.13	■■■□□ 2.89
TPRA1-208	ENST00000483868	GGA3	Q9NZ52	723 aa		33.13	■■■□□ 2.89
TPRA1-208	ENST00000483868	TCP10	Q12799	353 aa		33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	CERS3	Q8IU89	383 aa		33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	IDI2	Q9BXS1	227 aa		33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	MKRN1	Q9UHC7	482 aa	Known RBP	33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	PATL2	C9JE40	543 aa	Known RBP	33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	USP5	P45974	858 aa		33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	LSG1	Q9H089	658 aa	Known RBP	33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	DCP1A	Q9NPI6	582 aa	Predicted RBP	33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	POLR2A	P24928	1970 aa	Known RBP	33.11	■■■□□ 2.89
TPRA1-208	ENST00000483868	FLT1	P17948	1338 aa		33.1	■■■□□ 2.89
TPRA1-208	ENST00000483868	APP	P05067	770 aa		33.1	■■■□□ 2.89
TPRA1-208	ENST00000483868	MFAP1	P55081	439 aa	Known RBP	33.1	■■■□□ 2.89
TPRA1-208	ENST00000483868	ANO2	Q9NQ90	1003 aa		33.1	■■■□□ 2.89
TPRA1-208	ENST00000483868	GNAT2	P19087	354 aa		33.09	■■■□□ 2.89
TPRA1-208	ENST00000483868	FOCAD	Q5VW36	1801 aa		33.09	■■■□□ 2.89
TPRA1-208	ENST00000483868	BAZ2A	Q9UIF9	1905 aa	Known RBP	33.08	■■■□□ 2.89
TPRA1-208	ENST00000483868	PNMA8A	Q86V59	439 aa	Predicted RBP	33.08	■■■□□ 2.89
TPRA1-208	ENST00000483868	TMOD2	Q9NZR1	351 aa		33.08	■■■□□ 2.89
TPRA1-208	ENST00000483868	CNTNAP1	P78357	1384 aa		33.08	■■■□□ 2.89
TPRA1-208	ENST00000483868	YY1	P25490	414 aa		33.08	■■■□□ 2.89
TPRA1-208	ENST00000483868	EVX2	Q03828	476 aa		33.08	■■■□□ 2.89
TPRA1-208	ENST00000483868	IFNL3	Q8IZI9	196 aa		33.08	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms