RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 PIH1D3Q9NQM4 214 aaKnown RBP16.36■□□□□ 0.21
SSR1-208ENST00000483409 MROH7-TTC4A0A0A0MT08 1334 aa16.36■□□□□ 0.21
SSR1-208ENST00000483409 CDK5RAP2Q96SN8 1893 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 MYH7P12883 1935 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 OTOFQ9HC10 1997 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 BTDP43251 543 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 TNNI2P48788 182 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 AAMPQ13685 434 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 CDAN1Q8IWY9 1227 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 FZD1Q9UP38 647 aa16.35■□□□□ 0.21
SSR1-208ENST00000483409 WDR33Q9C0J8 1336 aaKnown RBP16.35■□□□□ 0.21
SSR1-208ENST00000483409 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
SSR1-208ENST00000483409 UBE2Q2LH0YL09 131 aa16.34■□□□□ 0.21
SSR1-208ENST00000483409 ECE1P42892 770 aa16.34■□□□□ 0.21
SSR1-208ENST00000483409 FKBP1BP68106 108 aa16.34■□□□□ 0.21
SSR1-208ENST00000483409 GSTO1P78417 241 aa16.34■□□□□ 0.21
SSR1-208ENST00000483409 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
SSR1-208ENST00000483409 HHIPL1Q96JK4 782 aa16.34■□□□□ 0.21
SSR1-208ENST00000483409 DNAJC2Q99543 621 aaKnown RBP16.34■□□□□ 0.21
SSR1-208ENST00000483409 ANTXR1Q9H6X2 564 aa16.34■□□□□ 0.21
SSR1-208ENST00000483409 IDH1O75874 414 aaKnown RBP16.33■□□□□ 0.2
SSR1-208ENST00000483409 TCP10Q12799 353 aa16.33■□□□□ 0.2
SSR1-208ENST00000483409 NFIAQ12857 509 aa16.33■□□□□ 0.2
SSR1-208ENST00000483409 HDAC1Q13547 482 aaPredicted RBP16.33■□□□□ 0.2
SSR1-208ENST00000483409 SUPT20HL1Q3ZLR7 823 aa16.33■□□□□ 0.2
SSR1-208ENST00000483409 FKBP1CQ5VVH2 108 aa16.33■□□□□ 0.2
SSR1-208ENST00000483409 NAA16Q6N069 864 aaPredicted RBP16.33■□□□□ 0.2
SSR1-208ENST00000483409 ARMC9Q7Z3E5 817 aa16.33■□□□□ 0.2
SSR1-208ENST00000483409 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
SSR1-208ENST00000483409 TEPSINQ96N21 525 aa16.33■□□□□ 0.2
SSR1-208ENST00000483409 ANGEL1Q9UNK9 670 aaKnown RBP16.33■□□□□ 0.2
SSR1-208ENST00000483409 FOCADQ5VW36 1801 aa16.33■□□□□ 0.2
SSR1-208ENST00000483409 GPR75-ASB3A0A0A6YYF3 556 aa16.32■□□□□ 0.2
SSR1-208ENST00000483409 AOC2O75106 756 aa16.32■□□□□ 0.2
SSR1-208ENST00000483409 LDHCP07864 332 aa16.32■□□□□ 0.2
SSR1-208ENST00000483409 ZNF157P51786 506 aaPredicted RBP16.32■□□□□ 0.2
SSR1-208ENST00000483409 RGMBQ6NW40 437 aa16.32■□□□□ 0.2
SSR1-208ENST00000483409 FAM83AQ86UY5 434 aa16.32■□□□□ 0.2
SSR1-208ENST00000483409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.32■□□□□ 0.2
SSR1-208ENST00000483409 BOLA2Q9H3K6 86 aa16.32■□□□□ 0.2
SSR1-208ENST00000483409 GOLIM4O00461 696 aa16.31■□□□□ 0.2
SSR1-208ENST00000483409 ATP5JP18859 108 aa16.31■□□□□ 0.2
SSR1-208ENST00000483409 EDC3Q96F86 508 aaKnown RBP16.31■□□□□ 0.2
SSR1-208ENST00000483409 FAM198AQ9UFP1 575 aa16.31■□□□□ 0.2
SSR1-208ENST00000483409 RFX7Q2KHR2 1363 aa16.3■□□□□ 0.2
SSR1-208ENST00000483409 PPP1R12BO60237 982 aaPredicted RBP16.3■□□□□ 0.2
SSR1-208ENST00000483409 RGS3P49796 1198 aa16.3■□□□□ 0.2
SSR1-208ENST00000483409 RHBDL3P58872 404 aa16.3■□□□□ 0.2
SSR1-208ENST00000483409 ANKRD45Q5TZF3 282 aa16.3■□□□□ 0.2
SSR1-208ENST00000483409 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
SSR1-208ENST00000483409 ADGRA1Q86SQ6 560 aa16.3■□□□□ 0.2
SSR1-208ENST00000483409 MAGEB6Q8N7X4 407 aa16.3■□□□□ 0.2
SSR1-208ENST00000483409 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
SSR1-208ENST00000483409 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
SSR1-208ENST00000483409 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
SSR1-208ENST00000483409 RPAP1Q9BWH6 1393 aaPredicted RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 FAM155AB1AL88 458 aaPredicted RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 WDHD1O75717 1129 aaPredicted RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 MAP3K12Q12852 859 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 PICALMQ13492 652 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 RASAL3Q86YV0 1011 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 ZFPM1Q8IX07 1006 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 OTUD7AQ8TE49 926 aaPredicted RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 FAM151AQ8WW52 585 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 HAUS7Q99871 368 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 DDX4Q9NQI0 724 aaKnown RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
SSR1-208ENST00000483409 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
SSR1-208ENST00000483409 IGHDP01880 384 aa16.28■□□□□ 0.2
SSR1-208ENST00000483409 SLC10A3P09131 477 aa16.28■□□□□ 0.2
SSR1-208ENST00000483409 CYP7A1P22680 504 aa16.28■□□□□ 0.2
SSR1-208ENST00000483409 IREB2P48200 963 aaKnown RBP16.28■□□□□ 0.2
SSR1-208ENST00000483409 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
SSR1-208ENST00000483409 LDLRAD1Q5T700 205 aa16.28■□□□□ 0.2
SSR1-208ENST00000483409 SH3RF3Q8TEJ3 882 aaPredicted RBP16.28■□□□□ 0.2
SSR1-208ENST00000483409 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
SSR1-208ENST00000483409 ZIC5Q96T25 663 aa16.28■□□□□ 0.2
SSR1-208ENST00000483409 IDI2Q9BXS1 227 aa16.28■□□□□ 0.2
SSR1-208ENST00000483409 MYH1P12882 1939 aa16.27■□□□□ 0.2
SSR1-208ENST00000483409 BAG3O95817 575 aa16.27■□□□□ 0.2
SSR1-208ENST00000483409 HSPA1AP0DMV8 641 aaKnown RBP16.27■□□□□ 0.2
SSR1-208ENST00000483409 HSPA1BP0DMV9 641 aaKnown RBP16.27■□□□□ 0.2
SSR1-208ENST00000483409 NOGQ13253 232 aa16.27■□□□□ 0.2
SSR1-208ENST00000483409 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
SSR1-208ENST00000483409 CLMNQ96JQ2 1002 aa16.27■□□□□ 0.2
SSR1-208ENST00000483409 IGSF3O75054 1194 aa16.26■□□□□ 0.19
SSR1-208ENST00000483409 ENTPD3O75355 529 aa16.26■□□□□ 0.19
SSR1-208ENST00000483409 PDE6AP16499 860 aa16.26■□□□□ 0.19
SSR1-208ENST00000483409 MAP2K2P36507 400 aa16.26■□□□□ 0.19
SSR1-208ENST00000483409 DYNLL1P63167 89 aaKnown RBP16.26■□□□□ 0.19
SSR1-208ENST00000483409 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
SSR1-208ENST00000483409 MIGA2Q7L4E1 593 aa16.26■□□□□ 0.19
SSR1-208ENST00000483409 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms