RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
COPA-203ENST00000481040 CERS3Q8IU89 383 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 REXO1Q8N1G1 1221 aaKnown RBP7.37□□□□□ -1.23
COPA-203ENST00000481040 NXPE3Q969Y0 559 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 ABHD17AQ96GS6 310 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 PNMA5Q96PV4 448 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 HHIPQ96QV1 700 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 TNKS2Q9H2K2 1166 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 BRMS1Q9HCU9 246 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 CHPF2Q9P2E5 772 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 ZNRF3Q9ULT6 936 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 NFKBIEO00221 500 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 BNIP3LO60238 219 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 IMPDH2P12268 514 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 HOXD8P13378 290 aaPredicted RBP7.36□□□□□ -1.23
COPA-203ENST00000481040 HOXB4P17483 251 aaPredicted RBP7.36□□□□□ -1.23
COPA-203ENST00000481040 NFKB1P19838 968 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 CTBSQ01459 385 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 PLAURQ03405 335 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 MTERF2Q49AM1 385 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 GK5Q6ZS86 529 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 REC114Q7Z4M0 266 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 TMEM102Q8N9M5 508 aaPredicted RBP7.36□□□□□ -1.23
COPA-203ENST00000481040 RBBP8NLQ8NC74 664 aaPredicted RBP7.36□□□□□ -1.23
COPA-203ENST00000481040 NEDD1Q8NHV4 660 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 THAP3Q8WTV1 239 aaPredicted RBP7.36□□□□□ -1.23
COPA-203ENST00000481040 DCAF5Q96JK2 942 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 TMEM39AQ9NV64 488 aa7.36□□□□□ -1.23
COPA-203ENST00000481040 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.36□□□□□ -1.23
COPA-203ENST00000481040 ATXN7O15265 892 aaPredicted RBP7.35□□□□□ -1.23
COPA-203ENST00000481040 CILPO75339 1184 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 MAP3K6O95382 1288 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 S100BP04271 92 aaPredicted RBP7.35□□□□□ -1.23
COPA-203ENST00000481040 CASP7P55210 303 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 CLCQ05315 142 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 TKFCQ3LXA3 575 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 HSP90AB2PQ58FF8 381 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 LSRQ86X29 649 aaPredicted RBP7.35□□□□□ -1.23
COPA-203ENST00000481040 ASAP3Q8TDY4 903 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 ENAMQ9NRM1 1142 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 SLC52A1Q9NWF4 448 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 G3BP2Q9UN86 482 aaKnown RBP7.35□□□□□ -1.23
COPA-203ENST00000481040 SAMM50Q9Y512 469 aa7.35□□□□□ -1.23
COPA-203ENST00000481040 KDM2BQ8NHM5 1336 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 KHNYNO15037 678 aaKnown RBP7.34□□□□□ -1.23
COPA-203ENST00000481040 GJB6O95452 261 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 BMP6P22004 513 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 MAP2K3P46734 347 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 ZNF157P51786 506 aaPredicted RBP7.34□□□□□ -1.23
COPA-203ENST00000481040 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 PLA2G4EQ3MJ16 856 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 RASIP1Q5U651 963 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.23
COPA-203ENST00000481040 FIGNL1Q6PIW4 674 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 NSUN5Q96P11 429 aaKnown RBP7.34□□□□□ -1.23
COPA-203ENST00000481040 EFCC1Q9HA90 598 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 TYW1Q9NV66 732 aaKnown RBP7.34□□□□□ -1.23
COPA-203ENST00000481040 CYP8B1Q9UNU6 501 aa7.34□□□□□ -1.23
COPA-203ENST00000481040 DCDC2BA2VCK2 349 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 PDE2AO00408 941 aaPredicted RBP7.33□□□□□ -1.24
COPA-203ENST00000481040 BPNT1O95861 308 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 PDGFRBP09619 1106 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 HCLS1P14317 486 aaPredicted RBP7.33□□□□□ -1.24
COPA-203ENST00000481040 LAMC2Q13753 1193 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 LBRQ14739 615 aaKnown RBP7.33□□□□□ -1.24
COPA-203ENST00000481040 TCEA2Q15560 299 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 PPP2R5EQ16537 467 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 DHX32Q7L7V1 743 aaKnown RBP7.33□□□□□ -1.24
COPA-203ENST00000481040 STRN4Q9NRL3 753 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 LRRC4BQ9NT99 713 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 PFDN2Q9UHV9 154 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 FAN1Q9Y2M0 1017 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 PCDHGC4Q9Y5F7 938 aa7.33□□□□□ -1.24
COPA-203ENST00000481040 DIAPH1O60610 1272 aaKnown RBP7.32□□□□□ -1.24
COPA-203ENST00000481040 DDAH1O94760 285 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 VIL1P09327 827 aaKnown RBP7.32□□□□□ -1.24
COPA-203ENST00000481040 NME2P22392 152 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 FGFR3P22607 806 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 NRLP54845 237 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 SPEM2Q0P670 501 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 LRRC14Q15048 493 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 SPATC1Q76KD6 591 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 GALNT6Q8NCL4 622 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 MUC3BQ9H195 1237 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 EHMT1Q9H9B1 1298 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 ATXN7L1Q9ULK2 861 aaPredicted RBP7.32□□□□□ -1.24
COPA-203ENST00000481040 PTCH2Q9Y6C5 1203 aa7.32□□□□□ -1.24
COPA-203ENST00000481040 ASMTLO95671 621 aa7.31□□□□□ -1.24
COPA-203ENST00000481040 COL8A1P27658 744 aa7.31□□□□□ -1.24
COPA-203ENST00000481040 TNP2Q05952 138 aa7.31□□□□□ -1.24
COPA-203ENST00000481040 SYNPOQ8N3V7 929 aa7.31□□□□□ -1.24
COPA-203ENST00000481040 BEND7Q8N7W2 519 aaPredicted RBP7.31□□□□□ -1.24
COPA-203ENST00000481040 C19orf47Q8N9M1 422 aaKnown RBP7.31□□□□□ -1.24
COPA-203ENST00000481040 BHMTQ93088 406 aa7.31□□□□□ -1.24
COPA-203ENST00000481040 PBX4Q9BYU1 374 aa7.31□□□□□ -1.24
COPA-203ENST00000481040 RASSF4Q9H2L5 321 aa7.31□□□□□ -1.24
COPA-203ENST00000481040 CLEC4MQ9H2X3 399 aaPredicted RBP7.31□□□□□ -1.24
COPA-203ENST00000481040 ZMYM5Q9UJ78 669 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms