RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 LAMB4A4D0S4 1761 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 BIN1O00499 593 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 ATP1A3P13637 1013 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 KRBA2Q6ZNG9 492 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 CEP112Q8N8E3 955 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 GOLGA5Q8TBA6 731 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 APPBP2Q92624 585 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 CCDC34Q96HJ3 373 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 PANX2Q96RD6 677 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 STK36Q9NRP7 1315 aa16.44■□□□□ 0.22
NR1H3-220ENST00000481020 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-220ENST00000481020 USP5P45974 858 aa16.43■□□□□ 0.22
NR1H3-220ENST00000481020 HSPA2P54652 639 aa16.43■□□□□ 0.22
NR1H3-220ENST00000481020 GNG11P61952 73 aa16.43■□□□□ 0.22
NR1H3-220ENST00000481020 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
NR1H3-220ENST00000481020 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
NR1H3-220ENST00000481020 NEUROD6Q96NK8 337 aa16.43■□□□□ 0.22
NR1H3-220ENST00000481020 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
NR1H3-220ENST00000481020 MAP2K7O14733 419 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 ERLIN1O75477 346 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 PHKG2P15735 406 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 ZNF18P17022 549 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 OAS2P29728 719 aaKnown RBP16.42■□□□□ 0.22
NR1H3-220ENST00000481020 TRDNQ13061 729 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 SHC4Q6S5L8 630 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 ZNF579Q8NAF0 562 aaKnown RBP16.42■□□□□ 0.22
NR1H3-220ENST00000481020 WASF1Q92558 559 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 FBXW7Q969H0 707 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 MAP3K14Q99558 947 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 FUT8Q9BYC5 575 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 C4AP0C0L4 1744 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 KIF28PB7ZC32 967 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 M0R2C6 588 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 ZNF213O14771 459 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
NR1H3-220ENST00000481020 IVLP07476 585 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 CCDC175P0C221 793 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 ERCC5P28715 1186 aaPredicted RBP16.42■□□□□ 0.22
NR1H3-220ENST00000481020 TRIM29Q14134 588 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 GORABQ5T7V8 394 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 IFNL2Q8IZJ0 200 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 ZNF496Q96IT1 587 aaPredicted RBP16.42■□□□□ 0.22
NR1H3-220ENST00000481020 GBP3Q9H0R5 595 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
NR1H3-220ENST00000481020 KCNH3Q9ULD8 1083 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 ANGEL1Q9UNK9 670 aaKnown RBP16.42■□□□□ 0.22
NR1H3-220ENST00000481020 NDUFB9Q9Y6M9 179 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 WDR17Q8IZU2 1322 aa16.42■□□□□ 0.22
NR1H3-220ENST00000481020 CCDC191Q8NCU4 936 aa16.41■□□□□ 0.22
NR1H3-220ENST00000481020 OSBP2Q969R2 916 aa16.41■□□□□ 0.22
NR1H3-220ENST00000481020 CCDC51Q96ER9 411 aa16.41■□□□□ 0.22
NR1H3-220ENST00000481020 ALG1Q9BT22 464 aa16.41■□□□□ 0.22
NR1H3-220ENST00000481020 FANCLQ9NW38 375 aa16.41■□□□□ 0.22
NR1H3-220ENST00000481020 RAB21Q9UL25 225 aa16.41■□□□□ 0.22
NR1H3-220ENST00000481020 ATRNO75882 1429 aa16.41■□□□□ 0.22
NR1H3-220ENST00000481020 A0A1B0GUL7 405 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 SEMA3EO15041 775 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 RPS6KA5O75582 802 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 FGAP02671 866 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 CHGBP05060 677 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
NR1H3-220ENST00000481020 RAD51AP2Q09MP3 1159 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 SRGAP1Q7Z6B7 1085 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 METTL16Q86W50 562 aaKnown RBP16.4■□□□□ 0.22
NR1H3-220ENST00000481020 KRI1Q8N9T8 703 aaKnown RBP16.4■□□□□ 0.22
NR1H3-220ENST00000481020 TC2NQ8N9U0 490 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 DPF2Q92785 391 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 PARD6BQ9BYG5 372 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.22
NR1H3-220ENST00000481020 NID2Q14112 1375 aa16.4■□□□□ 0.22
NR1H3-220ENST00000481020 FANCGO15287 622 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
NR1H3-220ENST00000481020 ANTXR2P58335 489 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-220ENST00000481020 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
NR1H3-220ENST00000481020 KRT40Q6A162 431 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 CTR9Q6PD62 1173 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 MSANTD4Q8NCY6 345 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 RBM33Q96EV2 1170 aaKnown RBP16.39■□□□□ 0.21
NR1H3-220ENST00000481020 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 MYO1AQ9UBC5 1043 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-220ENST00000481020 SASH3O75995 380 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
NR1H3-220ENST00000481020 ZSCAN26Q16670 478 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 HDXQ7Z353 690 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 ZNF512BQ96KM6 892 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-220ENST00000481020 CTAGE1Q96RT6 745 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 ACBD3Q9H3P7 528 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 INTS13Q9NVM9 706 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 PCDHA5Q9Y5H7 936 aa16.39■□□□□ 0.21
NR1H3-220ENST00000481020 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms