RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	FCGRT	P55899	365 aa		19.66	■□□□□ 0.74
HDLBP-238	ENST00000479894	HDLBP	Q00341	1268 aa	Known RBP	19.66	■□□□□ 0.74
HDLBP-238	ENST00000479894	PRKCZ	Q05513	592 aa		19.66	■□□□□ 0.74
HDLBP-238	ENST00000479894	IFIT5	Q13325	482 aa	Known RBP	19.66	■□□□□ 0.74
HDLBP-238	ENST00000479894	STK31	Q9BXU1	1019 aa		19.66	■□□□□ 0.74
HDLBP-238	ENST00000479894	UNC93B1	Q9H1C4	597 aa		19.66	■□□□□ 0.74
HDLBP-238	ENST00000479894	RPAP1	Q9BWH6	1393 aa	Predicted RBP	19.66	■□□□□ 0.74
HDLBP-238	ENST00000479894	LRIT3	Q3SXY7	679 aa		19.65	■□□□□ 0.74
HDLBP-238	ENST00000479894	FKBP1C	Q5VVH2	108 aa		19.65	■□□□□ 0.74
HDLBP-238	ENST00000479894	DCAF15	Q66K64	600 aa		19.65	■□□□□ 0.74
HDLBP-238	ENST00000479894	KCNH4	Q9UQ05	1017 aa		19.65	■□□□□ 0.74
HDLBP-238	ENST00000479894	ZBED9	Q6R2W3	1325 aa		19.65	■□□□□ 0.74
HDLBP-238	ENST00000479894	ZNF521	Q96K83	1311 aa		19.65	■□□□□ 0.74
HDLBP-238	ENST00000479894	PXYLP1	Q8TE99	480 aa		19.64	■□□□□ 0.73
HDLBP-238	ENST00000479894	COL25A1	Q9BXS0	654 aa	Predicted RBP	19.64	■□□□□ 0.73
HDLBP-238	ENST00000479894	BCR	P11274	1271 aa		19.63	■□□□□ 0.73
HDLBP-238	ENST00000479894	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	19.63	■□□□□ 0.73
HDLBP-238	ENST00000479894	PARK7	Q99497	189 aa	Known RBP	19.63	■□□□□ 0.73
HDLBP-238	ENST00000479894	MTMR10	Q9NXD2	777 aa		19.63	■□□□□ 0.73
HDLBP-238	ENST00000479894	TFRC	P02786	760 aa	Known RBP	19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	HIBADH	P31937	336 aa	Known RBP	19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	UBE4A	Q14139	1066 aa		19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	LINS1	Q8NG48	757 aa		19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	MRI	Q9BWK5	157 aa		19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	ZNF341	Q9BYN7	854 aa		19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	CRISPLD2	Q9H0B8	497 aa		19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	PAK6	Q9NQU5	681 aa	Predicted RBP	19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	TMOD2	Q9NZR1	351 aa		19.62	■□□□□ 0.73
HDLBP-238	ENST00000479894	ADCY3	O60266	1144 aa		19.61	■□□□□ 0.73
HDLBP-238	ENST00000479894	IRF5	Q13568	498 aa		19.61	■□□□□ 0.73
HDLBP-238	ENST00000479894	NECAB2	Q7Z6G3	386 aa		19.61	■□□□□ 0.73
HDLBP-238	ENST00000479894	TSPYL6	Q8N831	410 aa		19.61	■□□□□ 0.73
HDLBP-238	ENST00000479894	FOXO4	P98177	505 aa		19.6	■□□□□ 0.73
HDLBP-238	ENST00000479894	MOGS	Q13724	837 aa		19.6	■□□□□ 0.73
HDLBP-238	ENST00000479894	LDHAL6A	Q6ZMR3	332 aa		19.6	■□□□□ 0.73
HDLBP-238	ENST00000479894	TBC1D22A	Q8WUA7	517 aa		19.6	■□□□□ 0.73
HDLBP-238	ENST00000479894	TEKT1	Q969V4	418 aa		19.6	■□□□□ 0.73
HDLBP-238	ENST00000479894	DEFB118	Q96PH6	123 aa		19.6	■□□□□ 0.73
HDLBP-238	ENST00000479894	GABRQ	Q9UN88	632 aa		19.6	■□□□□ 0.73
HDLBP-238	ENST00000479894	PTPRF	P10586	1907 aa		19.6	■□□□□ 0.73
HDLBP-238	ENST00000479894	INHA	P05111	366 aa		19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	CACNB3	P54284	484 aa		19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894		Q7L0L9	218 aa		19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	G2E3	Q7L622	706 aa		19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	ANKLE1	Q8NAG6	615 aa		19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	DNAAF4	Q8WXU2	420 aa		19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	PAWR	Q96IZ0	340 aa	Known RBP	19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	FAM84B	Q96KN1	310 aa	Predicted RBP	19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	ZDHHC15	Q96MV8	337 aa		19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	ZNF112	Q9UJU3	913 aa		19.59	■□□□□ 0.73
HDLBP-238	ENST00000479894	PLIN1	O60240	522 aa		19.58	■□□□□ 0.72
HDLBP-238	ENST00000479894	INPP5B	P32019	993 aa		19.58	■□□□□ 0.72
HDLBP-238	ENST00000479894	GYG1	P46976	350 aa		19.58	■□□□□ 0.72
HDLBP-238	ENST00000479894	SLFN5	Q08AF3	891 aa		19.58	■□□□□ 0.72
HDLBP-238	ENST00000479894	CCDC57	Q2TAC2	916 aa		19.58	■□□□□ 0.72
HDLBP-238	ENST00000479894	TDH	Q8IZJ6	230 aa		19.58	■□□□□ 0.72
HDLBP-238	ENST00000479894	CNNM1	Q9NRU3	951 aa		19.58	■□□□□ 0.72
HDLBP-238	ENST00000479894	CHMP3	Q9Y3E7	222 aa		19.58	■□□□□ 0.72
HDLBP-238	ENST00000479894	CXCL11	O14625	94 aa		19.57	■□□□□ 0.72
HDLBP-238	ENST00000479894	SLC4A2	P04920	1241 aa		19.57	■□□□□ 0.72
HDLBP-238	ENST00000479894	FLT3LG	P49771	235 aa		19.57	■□□□□ 0.72
HDLBP-238	ENST00000479894	BCAM	P50895	628 aa		19.57	■□□□□ 0.72
HDLBP-238	ENST00000479894	TAF7L	Q5H9L4	462 aa		19.57	■□□□□ 0.72
HDLBP-238	ENST00000479894	NOL9	Q5SY16	702 aa	Known RBP	19.57	■□□□□ 0.72
HDLBP-238	ENST00000479894	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	19.57	■□□□□ 0.72
HDLBP-238	ENST00000479894	FLII	Q13045	1269 aa		19.56	■□□□□ 0.72
HDLBP-238	ENST00000479894	GRIK5	Q16478	980 aa		19.56	■□□□□ 0.72
HDLBP-238	ENST00000479894	GPAT2	Q6NUI2	795 aa		19.56	■□□□□ 0.72
HDLBP-238	ENST00000479894	MYH13	Q9UKX3	1938 aa		19.56	■□□□□ 0.72
HDLBP-238	ENST00000479894	MAST3	O60307	1309 aa		19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	FANCI	Q9NVI1	1328 aa		19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	CT47B1	P0C2W7	299 aa	Predicted RBP	19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	ELN	P15502	786 aa		19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	DDX60L	Q5H9U9	1706 aa	Known RBP	19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	APOBEC3H	Q6NTF7	200 aa	Known RBP	19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	LMBR1L	Q6UX01	489 aa		19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	SLC45A1	Q9Y2W3	748 aa		19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	SUGT1	Q9Y2Z0	365 aa		19.55	■□□□□ 0.72
HDLBP-238	ENST00000479894	CYP2C8	P10632	490 aa		19.54	■□□□□ 0.72
HDLBP-238	ENST00000479894	FKBP5	Q13451	457 aa	Predicted RBP	19.54	■□□□□ 0.72
HDLBP-238	ENST00000479894	MIGA2	Q7L4E1	593 aa		19.54	■□□□□ 0.72
HDLBP-238	ENST00000479894	FASTKD5	Q7L8L6	764 aa	Known RBP	19.54	■□□□□ 0.72
HDLBP-238	ENST00000479894	C7orf61	Q8IZ16	206 aa		19.54	■□□□□ 0.72
HDLBP-238	ENST00000479894	FAM151A	Q8WW52	585 aa		19.54	■□□□□ 0.72
HDLBP-238	ENST00000479894	TSR2	Q969E8	191 aa	Known RBP	19.54	■□□□□ 0.72
HDLBP-238	ENST00000479894	ZNF594	Q96JF6	807 aa	Predicted RBP	19.54	■□□□□ 0.72
HDLBP-238	ENST00000479894	TNPO2	O14787	897 aa	Known RBP	19.53	■□□□□ 0.72
HDLBP-238	ENST00000479894	TWISTNB	Q3B726	338 aa	Predicted RBP	19.53	■□□□□ 0.72
HDLBP-238	ENST00000479894	HHIPL2	Q6UWX4	724 aa		19.53	■□□□□ 0.72
HDLBP-238	ENST00000479894	FBXO33	Q7Z6M2	555 aa		19.53	■□□□□ 0.72
HDLBP-238	ENST00000479894	TRMT2A	Q8IZ69	625 aa	Known RBP	19.53	■□□□□ 0.72
HDLBP-238	ENST00000479894	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	19.53	■□□□□ 0.72
HDLBP-238	ENST00000479894	MAGEA10	P43363	369 aa	Predicted RBP	19.52	■□□□□ 0.72
HDLBP-238	ENST00000479894	VPS37D	Q86XT2	251 aa		19.52	■□□□□ 0.72
HDLBP-238	ENST00000479894	DIS3L	Q8TF46	1054 aa	Known RBP	19.52	■□□□□ 0.72
HDLBP-238	ENST00000479894	NBPF3	Q9H094	633 aa		19.52	■□□□□ 0.72
HDLBP-238	ENST00000479894	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	19.52	■□□□□ 0.72	7e-8	■□□□□ 8.8
HDLBP-238	ENST00000479894	DOCK2	Q92608	1830 aa		19.52	■□□□□ 0.72
HDLBP-238	ENST00000479894	PHIP	Q8WWQ0	1821 aa		19.51	■□□□□ 0.71
HDLBP-238	ENST00000479894	FAM109B	Q6ICB4	259 aa	Predicted RBP	19.51	■□□□□ 0.71

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