RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 BOLA2Q9H3K6 86 aa32.61■■■□□ 2.81
CCM2-211ENST00000478582 PIH1D3Q9NQM4 214 aaKnown RBP32.61■■■□□ 2.81
CCM2-211ENST00000478582 MYO1BO43795 1136 aa32.6■■■□□ 2.81
CCM2-211ENST00000478582 MECOMQ03112 1051 aa32.6■■■□□ 2.81
CCM2-211ENST00000478582 TTF1Q15361 905 aaPredicted RBP32.6■■■□□ 2.81
CCM2-211ENST00000478582 SLF2Q8IX21 1173 aa32.6■■■□□ 2.81
CCM2-211ENST00000478582 NSUN4Q96CB9 384 aaKnown RBP32.6■■■□□ 2.81
CCM2-211ENST00000478582 LNPKQ9C0E8 428 aa32.6■■■□□ 2.81
CCM2-211ENST00000478582 NDUFB9Q9Y6M9 179 aa32.6■■■□□ 2.81
CCM2-211ENST00000478582 MX1P20591 662 aa32.59■■■□□ 2.81
CCM2-211ENST00000478582 DIXDC1Q155Q3 683 aa32.59■■■□□ 2.81
CCM2-211ENST00000478582 ANTXR1Q9H6X2 564 aa32.59■■■□□ 2.81
CCM2-211ENST00000478582 RAI14Q9P0K7 980 aa32.59■■■□□ 2.81
CCM2-211ENST00000478582 ECM29Q5VYK3 1845 aa32.58■■■□□ 2.81
CCM2-211ENST00000478582 GAKO14976 1311 aa32.58■■■□□ 2.81
CCM2-211ENST00000478582 COL13A1Q5TAT6 717 aaPredicted RBP32.58■■■□□ 2.81
CCM2-211ENST00000478582 ERICH6BQ5W0A0 696 aa32.58■■■□□ 2.81
CCM2-211ENST00000478582 APOBEC3HQ6NTF7 200 aaKnown RBP32.58■■■□□ 2.81
CCM2-211ENST00000478582 ZNF384Q8TF68 577 aa32.58■■■□□ 2.81
CCM2-211ENST00000478582 STAP2Q9UGK3 403 aa32.58■■■□□ 2.81
CCM2-211ENST00000478582 DAGLAQ9Y4D2 1042 aa32.58■■■□□ 2.81
CCM2-211ENST00000478582 GSTO1P78417 241 aa32.57■■■□□ 2.8
CCM2-211ENST00000478582 NOGQ13253 232 aa32.57■■■□□ 2.8
CCM2-211ENST00000478582 CCDC102AQ96A19 550 aa32.57■■■□□ 2.8
CCM2-211ENST00000478582 ERC2O15083 957 aa32.56■■■□□ 2.8
CCM2-211ENST00000478582 LDHCP07864 332 aa32.56■■■□□ 2.8
CCM2-211ENST00000478582 NF2P35240 595 aa32.56■■■□□ 2.8
CCM2-211ENST00000478582 CTCFP49711 727 aaPredicted RBP32.56■■■□□ 2.8
CCM2-211ENST00000478582 TMED8Q6PL24 325 aaPredicted RBP32.56■■■□□ 2.8
CCM2-211ENST00000478582 DNAJC2Q99543 621 aaKnown RBP32.56■■■□□ 2.8
CCM2-211ENST00000478582 PAG1Q9NWQ8 432 aa32.56■■■□□ 2.8
CCM2-211ENST00000478582 PAPPA2Q9BXP8 1791 aa32.55■■■□□ 2.8
CCM2-211ENST00000478582 AOX1Q06278 1338 aa32.55■■■□□ 2.8
CCM2-211ENST00000478582 ZNF157P51786 506 aaPredicted RBP32.55■■■□□ 2.8
CCM2-211ENST00000478582 SPDYE2Q495Y8 402 aa32.55■■■□□ 2.8
CCM2-211ENST00000478582 PI4K2BQ8TCG2 481 aa32.55■■■□□ 2.8
CCM2-211ENST00000478582 DEFB129Q9H1M3 183 aa32.55■■■□□ 2.8
CCM2-211ENST00000478582 TDRD3Q9H7E2 651 aaKnown RBP32.55■■■□□ 2.8
CCM2-211ENST00000478582 CLRN2A0PK11 232 aa32.54■■■□□ 2.8
CCM2-211ENST00000478582 FAM155AB1AL88 458 aaPredicted RBP32.54■■■□□ 2.8
CCM2-211ENST00000478582 GOLIM4O00461 696 aa32.54■■■□□ 2.8
CCM2-211ENST00000478582 GLRX3O76003 335 aaKnown RBP32.54■■■□□ 2.8
CCM2-211ENST00000478582 TSHZ3Q63HK5 1081 aa32.54■■■□□ 2.8
CCM2-211ENST00000478582 ZNF70Q9UC06 446 aaPredicted RBP32.54■■■□□ 2.8
CCM2-211ENST00000478582 MROH7-TTC4A0A0A0MT08 1334 aa32.53■■■□□ 2.8
CCM2-211ENST00000478582 PDE1AP54750 535 aa32.53■■■□□ 2.8
CCM2-211ENST00000478582 MAP3K12Q12852 859 aa32.53■■■□□ 2.8
CCM2-211ENST00000478582 BEGAINQ9BUH8 593 aa32.53■■■□□ 2.8
CCM2-211ENST00000478582 PPP2R3BQ9Y5P8 575 aa32.53■■■□□ 2.8
CCM2-211ENST00000478582 IDH1O75874 414 aaKnown RBP32.52■■■□□ 2.8
CCM2-211ENST00000478582 NAA16Q6N069 864 aaPredicted RBP32.52■■■□□ 2.8
CCM2-211ENST00000478582 MOB2Q70IA6 237 aa32.52■■■□□ 2.8
CCM2-211ENST00000478582 GPR75-ASB3A0A0A6YYF3 556 aa32.51■■■□□ 2.79
CCM2-211ENST00000478582 EDC3Q96F86 508 aaKnown RBP32.51■■■□□ 2.79
CCM2-211ENST00000478582 VEZTQ9HBM0 779 aa32.51■■■□□ 2.79
CCM2-211ENST00000478582 DOCK2Q92608 1830 aa32.51■■■□□ 2.79
CCM2-211ENST00000478582 MAST2Q6P0Q8 1798 aa32.5■■■□□ 2.79
CCM2-211ENST00000478582 MYH2Q9UKX2 1941 aa32.5■■■□□ 2.79
CCM2-211ENST00000478582 TTLL12Q14166 644 aaPredicted RBP32.5■■■□□ 2.79
CCM2-211ENST00000478582 CENPQQ7L2Z9 268 aaPredicted RBP32.5■■■□□ 2.79
CCM2-211ENST00000478582 ZIC5Q96T25 663 aa32.5■■■□□ 2.79
CCM2-211ENST00000478582 PRDM10Q9NQV6 1147 aa32.5■■■□□ 2.79
CCM2-211ENST00000478582 UBE2Q2LH0YL09 131 aa32.49■■■□□ 2.79
CCM2-211ENST00000478582 SLC10A3P09131 477 aa32.49■■■□□ 2.79
CCM2-211ENST00000478582 FKBP1CQ5VVH2 108 aa32.49■■■□□ 2.79
CCM2-211ENST00000478582 PLEKHM2Q8IWE5 1019 aa32.49■■■□□ 2.79
CCM2-211ENST00000478582 OSBPL3Q9H4L5 887 aa32.49■■■□□ 2.79
CCM2-211ENST00000478582 MYO5AQ9Y4I1 1855 aaKnown RBP32.48■■■□□ 2.79
CCM2-211ENST00000478582 CDC42EP5Q6NZY7 148 aa32.48■■■□□ 2.79
CCM2-211ENST00000478582 MAP4K4O95819 1239 aaPredicted RBP32.47■■■□□ 2.79
CCM2-211ENST00000478582 HSPA8P11142 646 aaKnown RBP32.47■■■□□ 2.79
CCM2-211ENST00000478582 BTDP43251 543 aa32.47■■■□□ 2.79
CCM2-211ENST00000478582 LBX1P52954 281 aa32.47■■■□□ 2.79
CCM2-211ENST00000478582 TNFAIP1Q13829 316 aa32.47■■■□□ 2.79
CCM2-211ENST00000478582 ARMC9Q7Z3E5 817 aa32.47■■■□□ 2.79
CCM2-211ENST00000478582 CCDC136Q96JN2 1154 aa32.47■■■□□ 2.79
CCM2-211ENST00000478582 RASA3Q14644 834 aa32.46■■■□□ 2.79
CCM2-211ENST00000478582 MAGEB6Q8N7X4 407 aa32.46■■■□□ 2.79
CCM2-211ENST00000478582 USP40Q9NVE5 1235 aa32.46■■■□□ 2.79
CCM2-211ENST00000478582 TMOD2Q9NZR1 351 aa32.46■■■□□ 2.79
CCM2-211ENST00000478582 CYP7A1P22680 504 aa32.45■■■□□ 2.79
CCM2-211ENST00000478582 PPP4CP60510 307 aa32.45■■■□□ 2.79
CCM2-211ENST00000478582 KIF23Q02241 960 aaPredicted RBP32.45■■■□□ 2.79
CCM2-211ENST00000478582 SUPT20HL1Q3ZLR7 823 aa32.45■■■□□ 2.79
CCM2-211ENST00000478582 RASAL3Q86YV0 1011 aa32.45■■■□□ 2.79
CCM2-211ENST00000478582 CA12O43570 354 aa32.44■■■□□ 2.78
CCM2-211ENST00000478582 PDE4AP27815 886 aa32.44■■■□□ 2.78
CCM2-211ENST00000478582 PRKG1Q13976 671 aa32.44■■■□□ 2.78
CCM2-211ENST00000478582 SLC9C2Q5TAH2 1124 aa32.44■■■□□ 2.78
CCM2-211ENST00000478582 ADGRA1Q86SQ6 560 aa32.44■■■□□ 2.78
CCM2-211ENST00000478582 KBTBD3Q8NAB2 608 aa32.44■■■□□ 2.78
CCM2-211ENST00000478582 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.44■■■□□ 2.78
CCM2-211ENST00000478582 BAG3O95817 575 aa32.43■■■□□ 2.78
CCM2-211ENST00000478582 PDE6AP16499 860 aa32.43■■■□□ 2.78
CCM2-211ENST00000478582 RHBDL3P58872 404 aa32.43■■■□□ 2.78
CCM2-211ENST00000478582 FAM83AQ86UY5 434 aa32.43■■■□□ 2.78
CCM2-211ENST00000478582 TNNI2P48788 182 aa32.42■■■□□ 2.78
CCM2-211ENST00000478582 LDLRAD1Q5T700 205 aa32.42■■■□□ 2.78
CCM2-211ENST00000478582 ZSCAN25Q6NSZ9 544 aa32.42■■■□□ 2.78
CCM2-211ENST00000478582 NOL10Q9BSC4 688 aaKnown RBP32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms