RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TTC39AQ5SRH9 613 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 LDLRAD1Q5T700 205 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 CDC42EP5Q6NZY7 148 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 TNS4Q8IZW8 715 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 ZGPATQ8N5A5 531 aaKnown RBP10.18□□□□□ -0.78
HDAC6-221ENST00000477561 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-221ENST00000477561 SPATA5Q8NB90 893 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 CLMNQ96JQ2 1002 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 TEPSINQ96N21 525 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 SNRKQ9NRH2 765 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 ZBTB40Q9NUA8 1239 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 TMOD2Q9NZR1 351 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 ECM29Q5VYK3 1845 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-221ENST00000477561 MCAMP43121 646 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 TCP10Q12799 353 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 ERICH6BQ5W0A0 696 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 ERICH6Q7L0X2 663 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 DZIP1Q86YF9 867 aaKnown RBP10.17□□□□□ -0.78
HDAC6-221ENST00000477561 SIRT2Q8IXJ6 389 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 EAF2Q96CJ1 260 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-221ENST00000477561 SLC10A4Q96EP9 437 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 GPR108Q9NPR9 543 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 PRDM10Q9NQV6 1147 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 USP40Q9NVE5 1235 aa10.17□□□□□ -0.78
HDAC6-221ENST00000477561 TLR7Q9NYK1 1049 aaKnown RBP10.17□□□□□ -0.78
HDAC6-221ENST00000477561 TRPA1O75762 1119 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 UQCRFS1P1P0C7P4 283 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 IREB2P48200 963 aaKnown RBP10.16□□□□□ -0.78
HDAC6-221ENST00000477561 RRP1P56182 461 aaKnown RBP10.16□□□□□ -0.78
HDAC6-221ENST00000477561 MECOMQ03112 1051 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 NFIAQ12857 509 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 PDE3AQ14432 1141 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 MAP3K11Q16584 847 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 CCDC158Q5M9N0 1113 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 SPTY2D1Q68D10 685 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-221ENST00000477561 RPAP2Q8IXW5 612 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-221ENST00000477561 IL1RAPL2Q9NP60 686 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 RNF186Q9NXI6 227 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 RAI14Q9P0K7 980 aa10.16□□□□□ -0.78
HDAC6-221ENST00000477561 DBNLQ9UJU6 430 aaKnown RBP10.16□□□□□ -0.78
HDAC6-221ENST00000477561 PDS5AQ29RF7 1337 aaKnown RBP10.15□□□□□ -0.78
HDAC6-221ENST00000477561 IFFO2Q5TF58 517 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 SPRYD7Q5W111 196 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 MIGA2Q7L4E1 593 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 FAM83AQ86UY5 434 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 AACSQ86V21 672 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 ZFPM1Q8IX07 1006 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 RHPN1Q8TCX5 695 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 ZNF384Q8TF68 577 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 ELP3Q9H9T3 547 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 LRP2BPQ9P2M1 347 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 FAM198AQ9UFP1 575 aa10.15□□□□□ -0.78
HDAC6-221ENST00000477561 CA12O43570 354 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 HMMRO75330 724 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 CAPN15O75808 1086 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 BTDP43251 543 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 ZAP70P43403 619 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 MAP3K9P80192 1104 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 FKBP1CQ5VVH2 108 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 ERC1Q8IUD2 1116 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 SLF2Q8IX21 1173 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 ANKRD13AQ8IZ07 590 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 FAM151AQ8WW52 585 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 NSUN4Q96CB9 384 aaKnown RBP10.14□□□□□ -0.79
HDAC6-221ENST00000477561 WNK4Q96J92 1243 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 CHMP4BQ9H444 224 aaKnown RBP10.14□□□□□ -0.79
HDAC6-221ENST00000477561 NDUFB9Q9Y6M9 179 aa10.14□□□□□ -0.79
HDAC6-221ENST00000477561 MROH7-TTC4A0A0A0MT08 1334 aa10.13□□□□□ -0.79
HDAC6-221ENST00000477561 GAKO14976 1311 aa10.13□□□□□ -0.79
HDAC6-221ENST00000477561 TBC1D8O95759 1140 aa10.13□□□□□ -0.79
HDAC6-221ENST00000477561 CYP2E1P05181 493 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-221ENST00000477561 GJA5P36382 358 aa10.13□□□□□ -0.79
HDAC6-221ENST00000477561 RGS3P49796 1198 aa10.13□□□□□ -0.79
HDAC6-221ENST00000477561 PICALMQ13492 652 aa10.13□□□□□ -0.79
HDAC6-221ENST00000477561 HSP90AB4PQ58FF6 505 aa10.13□□□□□ -0.79
HDAC6-221ENST00000477561 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-221ENST00000477561 GPR75-ASB3A0A0A6YYF3 556 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 LDHCP07864 332 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 SLURP2P0DP57 97 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 TM4SF4P48230 202 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 GSTO1P78417 241 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 VGLL4Q14135 290 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 NAA16Q6N069 864 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 ZSCAN29Q8IWY8 852 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 REM2Q8IYK8 340 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 ZKSCAN4Q969J2 545 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 OPTNQ96CV9 577 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 KIF1BPQ96EK5 621 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 FAM163AQ96GL9 167 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 ZNF512BQ96KM6 892 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 WRNIP1Q96S55 665 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 DDX4Q9NQI0 724 aaKnown RBP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 PIH1D3Q9NQM4 214 aaKnown RBP10.12□□□□□ -0.79
HDAC6-221ENST00000477561 SAGE1Q9NXZ1 904 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 CSADQ9Y600 493 aa10.12□□□□□ -0.79
HDAC6-221ENST00000477561 MYH2Q9UKX2 1941 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 MANSC4A6NHS7 340 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-221ENST00000477561 UNCXA6NJT0 531 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms