RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SH3RF1Q7Z6J0 888 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 DGKHQ86XP1 1220 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 CELF2-AS1Q8N7Q2 184 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 ST13P5Q8NFI4 369 aaPredicted RBP3.57□□□□□ -1.84
HMGN4-202ENST00000477243 SLC39A7Q92504 469 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 SHDQ96IW2 340 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 NEUROD6Q96NK8 337 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 KIAA0586Q9BVV6 1533 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 KCNQ5Q9NR82 932 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 STRN4Q9NRL3 753 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 ATG3Q9NT62 314 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 JCADQ9P266 1359 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 RABGEF1Q9UJ41 708 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 FBXO2Q9UK22 296 aaPredicted RBP3.57□□□□□ -1.84
HMGN4-202ENST00000477243 LRFN2Q9ULH4 789 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 GTF2A1LQ9UNN4 478 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 PTCH2Q9Y6C5 1203 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 TTC28Q96AY4 2481 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 PIK3C2AO00443 1686 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 BIVM-ERCC5R4GMW8 1640 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 EPRSP07814 1512 aaKnown RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 KDM5BQ9UGL1 1544 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 ATRNO75882 1429 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 POTEFA5A3E0 1075 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 GREM1O60565 184 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 PDE8AO60658 829 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 RFPL1O75677 317 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 DDIT3P35638 169 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 HTR3AP46098 478 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 WNT7BP56706 349 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 SSRP1Q08945 709 aaKnown RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 APOBRQ0VD83 1088 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 MLC1Q15049 377 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 AGERQ15109 404 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 LRRC41Q15345 812 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 CCDC85BQ15834 202 aaPredicted RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 ESCO1Q5FWF5 840 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 ARSIQ5FYB1 569 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 TMEM67Q5HYA8 995 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 USPL1Q5W0Q7 1092 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 NXPE4Q6UWF7 544 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 ANKRD13DQ6ZTN6 518 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 DDX46Q7L014 1031 aaKnown RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 ZNF354CQ86Y25 554 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 SPICE1Q8N0Z3 855 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 RIN3Q8TB24 985 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 EPS8L3Q8TE67 593 aaKnown RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 NUDT16Q96DE0 195 aaKnown RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 IFT43Q96FT9 208 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 HERPUD2Q9BSE4 406 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 CARD14Q9BXL6 1004 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 BCO2Q9BYV7 579 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 CDH19Q9H159 772 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 AS3MTQ9HBK9 375 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 PRDM11Q9NQV5 511 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 AASDHPPTQ9NRN7 309 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 SCHIP1Q9P0W5 487 aaPredicted RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 USP25Q9UHP3 1055 aa3.56□□□□□ -1.84
HMGN4-202ENST00000477243 FNDC3AQ9Y2H6 1198 aaKnown RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 SPTBN5Q9NRC6 3674 aaKnown RBP3.56□□□□□ -1.84
HMGN4-202ENST00000477243 RAD54L2Q9Y4B4 1467 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SOGA1O94964 1423 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 A0A087X0B3 334 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 BICDL2A1A5D9 508 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 C19orf67A6NJJ6 358 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 PRRT4C9JH25 899 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SLC26A4O43511 780 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 RNF40O75150 1001 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 GADD45BO75293 160 aaPredicted RBP3.55□□□□□ -1.84
HMGN4-202ENST00000477243 TCEA3O75764 348 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 F2P00734 622 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 HSP90AB1P08238 724 aaKnown RBP3.55□□□□□ -1.84
HMGN4-202ENST00000477243 IMPDH2P12268 514 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 TRIM27P14373 513 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 PHKG2P15735 406 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 BAG6P46379 1132 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 GIPRP48546 466 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SCNN1DP51172 638 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 ITKQ08881 620 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 PIN1Q13526 163 aaPredicted RBP3.55□□□□□ -1.84
HMGN4-202ENST00000477243 GRIN2CQ14957 1233 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 RTN1Q16799 776 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 ERFEQ4G0M1 354 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 MSS51Q4VC12 460 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 RNF219Q5W0B1 726 aaPredicted RBP3.55□□□□□ -1.84
HMGN4-202ENST00000477243 CXorf57Q6NSI4 855 aaKnown RBP3.55□□□□□ -1.84
HMGN4-202ENST00000477243 FBXL19Q6PCT2 694 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 XKR5Q6UX68 686 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SAMD7Q7Z3H4 446 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SLC9A9Q8IVB4 645 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SLITRK4Q8IW52 837 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SCUBE3Q8IX30 993 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 ETFBKMTQ8IXQ9 262 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 AHI1Q8N157 1196 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 MAGEB6Q8N7X4 407 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 ANKRD42Q8N9B4 389 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 ANKRD24Q8TF21 1146 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 CHMP4CQ96CF2 233 aa3.55□□□□□ -1.84
HMGN4-202ENST00000477243 SCLT1Q96NL6 688 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms