RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 HHIPL1Q96JK4 782 aa18.35■□□□□ 0.53
DFFA-203ENST00000476658 CAPNS2Q96L46 248 aa18.35■□□□□ 0.53
DFFA-203ENST00000476658 USP40Q9NVE5 1235 aa18.35■□□□□ 0.53
DFFA-203ENST00000476658 WDR33Q9C0J8 1336 aaKnown RBP18.34■□□□□ 0.53
DFFA-203ENST00000476658 LDHCP07864 332 aa18.34■□□□□ 0.53
DFFA-203ENST00000476658 BTDP43251 543 aa18.34■□□□□ 0.53
DFFA-203ENST00000476658 NBPF12Q5TAG4 269 aaPredicted RBP18.34■□□□□ 0.53
DFFA-203ENST00000476658 TMEM39BQ9GZU3 492 aa18.34■□□□□ 0.53
DFFA-203ENST00000476658 PIH1D3Q9NQM4 214 aaKnown RBP18.34■□□□□ 0.53
DFFA-203ENST00000476658 DOCK2Q92608 1830 aa18.34■□□□□ 0.53
DFFA-203ENST00000476658 FKBP1CQ5VVH2 108 aa18.33■□□□□ 0.52
DFFA-203ENST00000476658 NAA16Q6N069 864 aaPredicted RBP18.33■□□□□ 0.52
DFFA-203ENST00000476658 JMYQ8N9B5 988 aa18.33■□□□□ 0.52
DFFA-203ENST00000476658 ZNF384Q8TF68 577 aa18.33■□□□□ 0.52
DFFA-203ENST00000476658 FAM163AQ96GL9 167 aaPredicted RBP18.33■□□□□ 0.52
DFFA-203ENST00000476658 UBE2Q2LH0YL09 131 aa18.32■□□□□ 0.52
DFFA-203ENST00000476658 IDH1O75874 414 aaKnown RBP18.32■□□□□ 0.52
DFFA-203ENST00000476658 HDAC1Q13547 482 aaPredicted RBP18.32■□□□□ 0.52
DFFA-203ENST00000476658 RGMBQ6NW40 437 aa18.32■□□□□ 0.52
DFFA-203ENST00000476658 ARMC9Q7Z3E5 817 aa18.32■□□□□ 0.52
DFFA-203ENST00000476658 FAM83AQ86UY5 434 aa18.32■□□□□ 0.52
DFFA-203ENST00000476658 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
DFFA-203ENST00000476658 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
DFFA-203ENST00000476658 ANTXR1Q9H6X2 564 aa18.32■□□□□ 0.52
DFFA-203ENST00000476658 ZBTB47Q9UFB7 747 aaPredicted RBP18.32■□□□□ 0.52
DFFA-203ENST00000476658 ANGEL1Q9UNK9 670 aaKnown RBP18.32■□□□□ 0.52
DFFA-203ENST00000476658 FZD1Q9UP38 647 aa18.32■□□□□ 0.52
DFFA-203ENST00000476658 SSC5DA1L4H1 1573 aa18.32■□□□□ 0.52
DFFA-203ENST00000476658 GPR75-ASB3A0A0A6YYF3 556 aa18.31■□□□□ 0.52
DFFA-203ENST00000476658 PPP1R12BO60237 982 aaPredicted RBP18.31■□□□□ 0.52
DFFA-203ENST00000476658 ZNF157P51786 506 aaPredicted RBP18.31■□□□□ 0.52
DFFA-203ENST00000476658 TCP10Q12799 353 aa18.31■□□□□ 0.52
DFFA-203ENST00000476658 CDAN1Q8IWY9 1227 aa18.31■□□□□ 0.52
DFFA-203ENST00000476658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.31■□□□□ 0.52
DFFA-203ENST00000476658 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
DFFA-203ENST00000476658 ATP5JP18859 108 aa18.3■□□□□ 0.52
DFFA-203ENST00000476658 MAP3K12Q12852 859 aa18.3■□□□□ 0.52
DFFA-203ENST00000476658 NFIAQ12857 509 aa18.3■□□□□ 0.52
DFFA-203ENST00000476658 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
DFFA-203ENST00000476658 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
DFFA-203ENST00000476658 GPATCH3Q96I76 525 aa18.3■□□□□ 0.52
DFFA-203ENST00000476658 TEPSINQ96N21 525 aa18.3■□□□□ 0.52
DFFA-203ENST00000476658 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
DFFA-203ENST00000476658 PCNTO95613 3336 aa18.29■□□□□ 0.52
DFFA-203ENST00000476658 GOLIM4O00461 696 aa18.29■□□□□ 0.52
DFFA-203ENST00000476658 IGSF3O75054 1194 aa18.29■□□□□ 0.52
DFFA-203ENST00000476658 AOC2O75106 756 aa18.29■□□□□ 0.52
DFFA-203ENST00000476658 FAM151AQ8WW52 585 aa18.29■□□□□ 0.52
DFFA-203ENST00000476658 ECHDC1Q9NTX5 307 aa18.29■□□□□ 0.52
DFFA-203ENST00000476658 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
DFFA-203ENST00000476658 FAM198AQ9UFP1 575 aa18.29■□□□□ 0.52
DFFA-203ENST00000476658 MYH7P12883 1935 aa18.29■□□□□ 0.52
DFFA-203ENST00000476658 THSD7BQ9C0I4 1608 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 BAG3O95817 575 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 CYP7A1P22680 504 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 RGS3P49796 1198 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 PICALMQ13492 652 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 CCDC102AQ96A19 550 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 AATFQ9NY61 560 aaKnown RBP eCLIP18.28■□□□□ 0.52
DFFA-203ENST00000476658 CDK5RAP2Q96SN8 1893 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 RPAP1Q9BWH6 1393 aaPredicted RBP18.28■□□□□ 0.52
DFFA-203ENST00000476658 OTOFQ9HC10 1997 aa18.28■□□□□ 0.52
DFFA-203ENST00000476658 IREB2P48200 963 aaKnown RBP18.27■□□□□ 0.52
DFFA-203ENST00000476658 ADGRA1Q86SQ6 560 aa18.27■□□□□ 0.52
DFFA-203ENST00000476658 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
DFFA-203ENST00000476658 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
DFFA-203ENST00000476658 HAUS7Q99871 368 aa18.27■□□□□ 0.52
DFFA-203ENST00000476658 IDI2Q9BXS1 227 aa18.27■□□□□ 0.52
DFFA-203ENST00000476658 PAG1Q9NWQ8 432 aa18.27■□□□□ 0.52
DFFA-203ENST00000476658 ENTPD3O75355 529 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 USP2O75604 605 aaPredicted RBP18.26■□□□□ 0.51
DFFA-203ENST00000476658 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
DFFA-203ENST00000476658 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
DFFA-203ENST00000476658 MAP2K2P36507 400 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 RHBDL3P58872 404 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 NOGQ13253 232 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 MAP3K11Q16584 847 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 TSHZ3Q63HK5 1081 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 RASAL3Q86YV0 1011 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 TEX11Q8IYF3 940 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 SH3RF3Q8TEJ3 882 aaPredicted RBP18.26■□□□□ 0.51
DFFA-203ENST00000476658 RFX7Q2KHR2 1363 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 FOCADQ5VW36 1801 aa18.26■□□□□ 0.51
DFFA-203ENST00000476658 FAM155AB1AL88 458 aaPredicted RBP18.25■□□□□ 0.51
DFFA-203ENST00000476658 SLC10A3P09131 477 aa18.25■□□□□ 0.51
DFFA-203ENST00000476658 PLCG2P16885 1265 aa18.25■□□□□ 0.51
DFFA-203ENST00000476658 LDLRAD1Q5T700 205 aa18.25■□□□□ 0.51
DFFA-203ENST00000476658 ZSCAN29Q8IWY8 852 aaPredicted RBP18.25■□□□□ 0.51
DFFA-203ENST00000476658 ZFPM1Q8IX07 1006 aa18.25■□□□□ 0.51
DFFA-203ENST00000476658 MIGA1Q8NAN2 632 aa18.25■□□□□ 0.51
DFFA-203ENST00000476658 DDX4Q9NQI0 724 aaKnown RBP18.25■□□□□ 0.51
DFFA-203ENST00000476658 IGHDP01880 384 aa18.24■□□□□ 0.51
DFFA-203ENST00000476658 HSPA1AP0DMV8 641 aaKnown RBP18.24■□□□□ 0.51
DFFA-203ENST00000476658 HSPA1BP0DMV9 641 aaKnown RBP18.24■□□□□ 0.51
DFFA-203ENST00000476658 PPP4CP60510 307 aa18.24■□□□□ 0.51
DFFA-203ENST00000476658 MAP2K1Q02750 393 aaPredicted RBP18.24■□□□□ 0.51
DFFA-203ENST00000476658 SLC9C2Q5TAH2 1124 aa18.24■□□□□ 0.51
DFFA-203ENST00000476658 DCAF15Q66K64 600 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms