RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 TMED8Q6PL24 325 aaPredicted RBP18.43■□□□□ 0.54
SNX13-207ENST00000475800 PI16Q6UXB8 463 aa18.43■□□□□ 0.54
SNX13-207ENST00000475800 APOBEC3FQ8IUX4 373 aaKnown RBP18.43■□□□□ 0.54
SNX13-207ENST00000475800 CDCA5Q96FF9 252 aa18.43■□□□□ 0.54
SNX13-207ENST00000475800 LRP2BPQ9P2M1 347 aa18.43■□□□□ 0.54
SNX13-207ENST00000475800 MYO5AQ9Y4I1 1855 aaKnown RBP18.43■□□□□ 0.54
SNX13-207ENST00000475800 ATP5JP18859 108 aa18.42■□□□□ 0.54
SNX13-207ENST00000475800 ZAP70P43403 619 aa18.42■□□□□ 0.54
SNX13-207ENST00000475800 PRAMEF18Q5VWM3 479 aa18.42■□□□□ 0.54
SNX13-207ENST00000475800 SNRKQ9NRH2 765 aa18.42■□□□□ 0.54
SNX13-207ENST00000475800 ECHDC1Q9NTX5 307 aa18.42■□□□□ 0.54
SNX13-207ENST00000475800 DOCK2Q92608 1830 aa18.42■□□□□ 0.54
SNX13-207ENST00000475800 IGHDP01880 384 aa18.41■□□□□ 0.54
SNX13-207ENST00000475800 CYP2E1P05181 493 aaPredicted RBP18.41■□□□□ 0.54
SNX13-207ENST00000475800 LDHCP07864 332 aa18.41■□□□□ 0.54
SNX13-207ENST00000475800 KIF23Q02241 960 aaPredicted RBP18.41■□□□□ 0.54
SNX13-207ENST00000475800 TNFAIP1Q13829 316 aa18.41■□□□□ 0.54
SNX13-207ENST00000475800 FAM163AQ96GL9 167 aaPredicted RBP18.41■□□□□ 0.54
SNX13-207ENST00000475800 PRMT6Q96LA8 375 aaPredicted RBP18.41■□□□□ 0.54
SNX13-207ENST00000475800 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
SNX13-207ENST00000475800 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
SNX13-207ENST00000475800 FAM155AB1AL88 458 aaPredicted RBP18.4■□□□□ 0.54
SNX13-207ENST00000475800 SPDYE2Q495Y8 402 aa18.4■□□□□ 0.54
SNX13-207ENST00000475800 TBC1D9Q6ZT07 1266 aa18.4■□□□□ 0.54
SNX13-207ENST00000475800 MOB2Q70IA6 237 aa18.4■□□□□ 0.54
SNX13-207ENST00000475800 MCOLN1Q9GZU1 580 aa18.4■□□□□ 0.54
SNX13-207ENST00000475800 TMOD2Q9NZR1 351 aa18.4■□□□□ 0.54
SNX13-207ENST00000475800 ERC2O15083 957 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 CA12O43570 354 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 MECOMQ03112 1051 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 DGKZQ13574 1117 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 DIXDC1Q155Q3 683 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 NSUN4Q96CB9 384 aaKnown RBP18.39■□□□□ 0.53
SNX13-207ENST00000475800 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.39■□□□□ 0.53
SNX13-207ENST00000475800 DAGLAQ9Y4D2 1042 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 PPP2R3BQ9Y5P8 575 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 GAKO14976 1311 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 MYH7P12883 1935 aa18.39■□□□□ 0.53
SNX13-207ENST00000475800 TRPA1O75762 1119 aa18.38■□□□□ 0.53
SNX13-207ENST00000475800 MAP3K12Q12852 859 aa18.38■□□□□ 0.53
SNX13-207ENST00000475800 TTLL12Q14166 644 aaPredicted RBP18.38■□□□□ 0.53
SNX13-207ENST00000475800 APOBEC3HQ6NTF7 200 aaKnown RBP18.38■□□□□ 0.53
SNX13-207ENST00000475800 HAUS7Q99871 368 aa18.38■□□□□ 0.53
SNX13-207ENST00000475800 BOLA2Q9H3K6 86 aa18.38■□□□□ 0.53
SNX13-207ENST00000475800 TDRD3Q9H7E2 651 aaKnown RBP18.38■□□□□ 0.53
SNX13-207ENST00000475800 ZNF70Q9UC06 446 aaPredicted RBP18.38■□□□□ 0.53
SNX13-207ENST00000475800 PCDHAC2Q9Y5I4 1007 aa18.38■□□□□ 0.53
SNX13-207ENST00000475800 MROH7-TTC4A0A0A0MT08 1334 aa18.38■□□□□ 0.53
SNX13-207ENST00000475800 MAP4K4O95819 1239 aaPredicted RBP18.37■□□□□ 0.53
SNX13-207ENST00000475800 MX1P20591 662 aa18.37■□□□□ 0.53
SNX13-207ENST00000475800 TNNI2P48788 182 aa18.37■□□□□ 0.53
SNX13-207ENST00000475800 NUCB1Q02818 461 aa18.37■□□□□ 0.53
SNX13-207ENST00000475800 FKBP1CQ5VVH2 108 aa18.37■□□□□ 0.53
SNX13-207ENST00000475800 NAA16Q6N069 864 aaPredicted RBP18.37■□□□□ 0.53
SNX13-207ENST00000475800 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
SNX13-207ENST00000475800 DNAJC2Q99543 621 aaKnown RBP18.37■□□□□ 0.53
SNX13-207ENST00000475800 VEZTQ9HBM0 779 aa18.37■□□□□ 0.53
SNX13-207ENST00000475800 PIH1D3Q9NQM4 214 aaKnown RBP18.37■□□□□ 0.53
SNX13-207ENST00000475800 PAG1Q9NWQ8 432 aa18.37■□□□□ 0.53
SNX13-207ENST00000475800 CLRN2A0PK11 232 aa18.36■□□□□ 0.53
SNX13-207ENST00000475800 UBE2Q2LH0YL09 131 aa18.36■□□□□ 0.53
SNX13-207ENST00000475800 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
SNX13-207ENST00000475800 GLRX3O76003 335 aaKnown RBP18.36■□□□□ 0.53
SNX13-207ENST00000475800 MKRN3Q13064 507 aaKnown RBP18.36■□□□□ 0.53
SNX13-207ENST00000475800 CHD1LQ86WJ1 897 aa18.36■□□□□ 0.53
SNX13-207ENST00000475800 NOL10Q9BSC4 688 aaKnown RBP18.36■□□□□ 0.53
SNX13-207ENST00000475800 GPR75-ASB3A0A0A6YYF3 556 aa18.35■□□□□ 0.53
SNX13-207ENST00000475800 GOLIM4O00461 696 aa18.35■□□□□ 0.53
SNX13-207ENST00000475800 NF2P35240 595 aa18.35■□□□□ 0.53
SNX13-207ENST00000475800 PRKG1Q13976 671 aa18.35■□□□□ 0.53
SNX13-207ENST00000475800 B4GALNT3Q6L9W6 998 aa18.35■□□□□ 0.53
SNX13-207ENST00000475800 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
SNX13-207ENST00000475800 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
SNX13-207ENST00000475800 DEFB129Q9H1M3 183 aa18.35■□□□□ 0.53
SNX13-207ENST00000475800 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 AK9Q5TCS8 1911 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 BAG3O95817 575 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 SLC10A3P09131 477 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 PLCG2P16885 1265 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 RASAL3Q86YV0 1011 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 CSRNP1Q96S65 589 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.53
SNX13-207ENST00000475800 ANTXR1Q9H6X2 564 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 RNF186Q9NXI6 227 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 STAP2Q9UGK3 403 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 NDUFB9Q9Y6M9 179 aa18.34■□□□□ 0.53
SNX13-207ENST00000475800 AOX1Q06278 1338 aa18.33■□□□□ 0.53
SNX13-207ENST00000475800 BTDP43251 543 aa18.33■□□□□ 0.52
SNX13-207ENST00000475800 ERICH6BQ5W0A0 696 aa18.33■□□□□ 0.52
SNX13-207ENST00000475800 CDC42EP5Q6NZY7 148 aa18.33■□□□□ 0.52
SNX13-207ENST00000475800 FAM83AQ86UY5 434 aa18.33■□□□□ 0.52
SNX13-207ENST00000475800 USP40Q9NVE5 1235 aa18.33■□□□□ 0.52
SNX13-207ENST00000475800 PDE1AP54750 535 aa18.32■□□□□ 0.52
SNX13-207ENST00000475800 RASA3Q14644 834 aa18.32■□□□□ 0.52
SNX13-207ENST00000475800 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
SNX13-207ENST00000475800 ZSCAN25Q6NSZ9 544 aa18.32■□□□□ 0.52
SNX13-207ENST00000475800 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
SNX13-207ENST00000475800 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
SNX13-207ENST00000475800 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms